DY271278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271278 vs. ExPASy Swiss-Prot
Match: TTL12_HUMAN (Tubulin--tyrosine ligase-like protein 12 OS=Homo sapiens GN=TTLL12 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 1.691e-29 Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 2 Query: 128 RVYTDIPYVEEFLTRTEFVITTEPKDADIIWTSLQVDEDMKKATGITDQQYVNQFPFESCLVMKHHLAETVQKAHG--SPEWLQPTYNLETHLPQLIGDYYVRKRDGLNNLWILKPWNMARTIDTSVTDDLSAVIRLMETGPKICQKYIEFPALF 586 +VYTD+ V LT F +T DADI++ +D +K + +NQFP E+ L +K LA ++A G P WL T+NL T LPQ + + R+R G +N WI KPWN+AR++DT VT L ++IR E+ PK+ KYIE P LF Sbjct: 306 KVYTDVQQVASSLTHPRFTLTQSEADADILFNFSHF-KDYRKLSQERPGVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRTFNLRTELPQFVSYFQQRERWGEDNHWICKPWNLARSLDTHVTKSLHSIIRHRESTPKVVSKYIESPVLF 459 HSP 2 Score: 30.4166 bits (67), Expect = 1.691e-29 Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 3 Query: 615 ILLGRSMDPLKIFLSDVFWVRLA 683 I+L RS+ PL++F+ DVFW+R + Sbjct: 474 IVLLRSVRPLRLFVYDVFWLRFS 496
BLAST of DY271278 vs. ExPASy Swiss-Prot
Match: TTL12_CAEEL (Tubulin--tyrosine ligase-like protein 12 OS=Caenorhabditis elegans GN=ttll-12 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.953e-27 Identity = 61/153 (39.87%), Postives = 92/153 (60.13%), Query Frame = 2 Query: 128 RVYTDIPYVEEFLTRTEFVITTEPKDADIIWTSLQVDEDMKKATGITDQQYVNQFPFESCLVMKHHLAETVQKAHGSPEWLQPTYNLETHLPQLIGDYYVRKRDGLNNLWILKPWNMARTIDTSVTDDLSAVIRLMETGPKICQKYIEFPALF 586 +VY D + E L + + K AD+IW ++ D K+ + +NQFPFESC+ +K LA + +W Q TYNL T LP+ + + R+ +G +N+WI+KPWN+AR +D +VT+DL+ +IR++ETGPKI +YI P LF Sbjct: 330 KVYADDTQLTEHLKNHKVEYVDDIKKADVIWM-IKHFHDYKQLSEENPCGMINQFPFESCITVKDLLAACAMRDPAKNDWYQLTYNLNTQLPEFVARFQNRELNGQHNVWIVKPWNLARGMDMTVTEDLNQIIRMIETGPKIVCEYIPRPLLF 481
BLAST of DY271278 vs. ExPASy Swiss-Prot
Match: TTL12_MOUSE (Tubulin--tyrosine ligase-like protein 12 OS=Mus musculus GN=Ttll12 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.962e-26 Identity = 67/162 (41.36%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 107 RSDGCASRVYTDIPYVEEFLTRTEFVITTEPKDADIIWTSLQVDEDMKKATGITDQQYVNQFPFESCLVMKHHLAETVQKAHG--SPEWLQPTYNLETHLPQLIGDYYVRKRDGLNNLWILKPWNMARTIDTSVTDDLSAVIRLMETGPKICQKYIEFPALF 586 R G RV+ D+ V LT F T DADI + +D K + + Q +NQFP E+ L +K LA ++A G P WL T+NL T LPQ + + R+R G +N WI KPWN+AR++DT VT++L ++IR E+ PK+ KYIE P LF Sbjct: 294 RPQGHVFRVHCDVQQVLGHLTHPRFTFTDSEADADIFFHFSHF-KDYMKLSQESPQVLLNQFPCENLLTVKDCLASIARRAGGPEGPPWLPRTFNLRTELPQFVSYFQHRERRGEDNHWICKPWNLARSLDTHVTNNLHSIIRHRESTPKVVSKYIESPVLF 454
BLAST of DY271278 vs. ExPASy Swiss-Prot
Match: TTL12_CAEBR (Tubulin--tyrosine ligase-like protein 12 OS=Caenorhabditis briggsae GN=ttll-12 PE=4 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 4.371e-26 Identity = 58/153 (37.91%), Postives = 90/153 (58.82%), Query Frame = 2 Query: 128 RVYTDIPYVEEFLTRTEFVITTEPKDADIIWTSLQVDEDMKKATGITDQQYVNQFPFESCLVMKHHLAETVQKAHGSPEWLQPTYNLETHLPQLIGDYYVRKRDGLNNLWILKPWNMARTIDTSVTDDLSAVIRLMETGPKICQKYIEFPALF 586 +++ D + E L + + K AD+IW ++ D +NQFPFESC+ +K LA + +W Q TYNL T LP+ + + R+++G +N+WI+KPWN+AR ++ +VTDDL+ +IR++ETGPKI +YI P LF Sbjct: 338 QIFADDTQLTEHLKSRQIEYVDDWKAADVIWM-IKHFHDYSNLAQENPCAQINQFPFESCITVKDLLAACAMRDPSKNDWYQLTYNLNTQLPEFVARFQNRQKNGEHNVWIVKPWNLARGMEMAVTDDLNQIIRMVETGPKIVCEYIARPLLF 489 The following BLAST results are available for this feature:
BLAST of DY271278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271278 ID=DY271278; Name=DY271278; organism=Citrus clementina; type=EST; length=1013bpback to top |