DY271281

Overview
NameDY271281
Unique NameDY271281
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1108
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.664e-29
Identity = 62/71 (87.32%), Postives = 65/71 (91.55%), Query Frame = 1
Query:    4 AKDPFGKDWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAIIDSYHNVS 216
            +KD  GKDWSFI +QIGMFSFTGLNKA  DNMT+KWHVYMTKDGRISLAGLSL KCEYLADAIIDSYHNVS
Sbjct:  383 SKDKSGKDWSFILKQIGMFSFTGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 453          
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.192e-27
Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 1
Query:    4 AKDPFGKDWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAIIDSYHNVS 216
            +KD  GKDWSFI +QIGMFS+TGLNK   DNMTNKWHVYMTKDGRISLAGLSL KCEYLADAIIDS+H VS
Sbjct:  384 SKDKSGKDWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSFHYVS 454          
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.352e-13
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 1
Query:   25 DWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAI 192
            DWS I +QIGMF+FTGLN A +  MT ++H+YMT DGRIS+AGLS     +LADAI
Sbjct:  386 DWSHIIKQIGMFTFTGLNPAQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAI 441          
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 8.296e-13
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 1
Query:   25 DWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAI 192
            DWS I +QIGMF+FTGLNK  ++ MT ++H+YMT DGRIS+AGLS     +LADA+
Sbjct:  342 DWSHIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAM 397          
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.415e-12
Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 1
Query:   25 DWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAI 192
            DWS I +QIGMF+FTGLN   +  MTN++H+Y+T DGRIS+AGLS     +LADAI
Sbjct:  342 DWSHIVKQIGMFTFTGLNSEQVTFMTNEYHIYLTSDGRISMAGLSSRTVPHLADAI 397          
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.485e-11
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 1
Query:   22 KDWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAI 192
            +DWS I  QIGMF FTGL    +D + N++H+Y+T++GRIS+AG++    EYLA A+
Sbjct:  363 RDWSHITTQIGMFCFTGLTPEQVDRLANEYHIYLTRNGRISIAGINSTNVEYLAKAM 419          
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.552e-11
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 1
Query:   25 DWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAI 192
            DWS I +QIGMF+FTGLN   +  M  ++H+YMT DGRIS+AGLS     +LADAI
Sbjct:  344 DWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAI 399          
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AATC_DICDI (Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum GN=aatB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.945e-11
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 1
Query:   25 DWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAIIDS 201
            +W  I  QIGMF++TGL K  +D + NK+H+Y+   GR+SLAGL+    +Y ADAI+D+
Sbjct:  375 NWEHIVNQIGMFTYTGLTKPQVDILVNKYHIYLLGSGRVSLAGLNNKNIDYFADAILDA 433          
BLAST of DY271281 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 7.764e-11
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1
Query:   25 DWSFIHRQIGMFSFTGLNKAHIDNMTNKWHVYMTKDGRISLAGLSLDKCEYLADAI 192
            DWS I +QIGMF+FTGLN   +  +T ++H+Y+T DGRIS+AGLS     +LA AI
Sbjct:  355 DWSHIIKQIGMFTFTGLNPEQVSILTKEYHIYLTSDGRISMAGLSSKTVPHLAHAI 410          
The following BLAST results are available for this feature:
BLAST of DY271281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
AAT5_ARATH1.664e-2987.32Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN1.192e-2783.10Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AAT3_ARATH6.352e-1362.50Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AAT2_ARATH8.296e-1360.71Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AATC_DAUCA1.415e-1260.71Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AATM_DICDI3.485e-1150.88Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATC_ORYSJ4.552e-1158.93Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AATC_DICDI5.945e-1149.15Aspartate aminotransferase, cytoplasmic OS=Dictyos... [more]
AAT1_MEDSA7.764e-1155.36Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YH07FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271281 ID=DY271281; Name=DY271281; organism=Citrus clementina; type=EST; length=1108bp
AGGGCAAAAGACCCTTTTGGAAAAGATTGGTCATTCATTCACAGGCAGAT
TGGCATGTTCTCATTCACAGGCTTGAACAAAGCGCATATTGATAATATGA
CAAATAAGTGGCATGTCTACATGACCAAGGATGGGAGGATATCCTTGGCT
GGATTGTCTTTGGACAAATGTGAATATCTTGCCGATGCCATCATTGATTC
ATATCACAATGTCAGTTGAAGTTGTTGGATCACTAGACAGATAATCACAT
TAGAAATCACACCCTTAGGATGTAGGGGAGTCCCAATTGACTATTATTTA
CTCACTATGCTTTACAAGTTTCCATGGTCAACTTTTGATTGATCATTGTT
CTAGTACACATTTCCCGAATATCTAATATCCGCTCTTGCGATTTGAAAGA
TATTTTTATATAGCTTTTTGGTTCCTTTAGATTTCAGTCAATCTAAATCT
ACACTACTCAACCCTCCTTCCAACCAACACACACGCACCACTCAAAAACC
TTCACAAACAACCAAGTTCAATACCAAACGTTCACATCCAGCCCAAAATC
AAAATCCATATATCGCCCTGTGCCTCTACCTCCTGGTTGAAAGAAACCAC
AAGAAAACAGCTCTAATTTAAAAAACCTCGCCCTAACATCAGCAACAAAC
GGAATAAACTAACCTCCAGATAAAATCCATACCTCATTTTGACCAAGTGC
TCCGGCCCGCCCCCCACACACCCCACATATCTACCCTACAAACCACTCAA
CCCCTTCTCCACCAGCCTTCCCATAAACCCAATAACAAAAATAAAAACGA
GAACACAAATATCTACAATAACCGGACTGGCCACTGAATAACTCCACCGT
AAACGTATACTTCACGAGTTTAAATACTTACTCCACCCTATTTCTCAAAT
CGTAATAAACCTCTCCCCCCCCCTACCTACAGCGCCTCCCCACACAACTA
CCCCACCCATCCCATCTGCTGAGCCGTATATCATACAATGCTCGTACCAA
AACAGGCAACGCGCGCAAACTGCAGATATTATATCAAATATCCGACACCG
ATGACCACCGAACCCCCAACTCTTGATATCTGTACATATTCATATTATCA
TCTCTTTA
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