DY271288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 8.404e-75 Identity = 143/180 (79.44%), Postives = 159/180 (88.33%), Query Frame = 3 Query: 78 NPVRHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIP 617 NP+R R L R+ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE++ DEETGLELNEENIEKVLEEIRPYL+G A GSL+LV I++PIVK+RITGPAAGVMTVRVAVTQKLREKIP Sbjct: 49 NPLRRGLSRFLSSRQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIP 227
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.701e-59 Identity = 123/201 (61.19%), Postives = 151/201 (75.12%), Query Frame = 3 Query: 24 SKSTKSFFGERVSLTRWRNPVRHSSCRLLLIRKRGAARRN-VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIP 617 S +T S +V+ W + SS L+ R V+ A+A P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACGSCPSS++T+K GIERRLMEKIP++ AVE V D+ETGLELNEEN+EKVL EIRPYL G GG L+ + I PIVKVR+TGPAA V TVR+AV++KLREKIP Sbjct: 17 STTTSSSASFKVAAYAWSSCRSSSSPATRLVAAPNHQRPPLVVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIP 217
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.648e-54 Identity = 109/146 (74.66%), Postives = 124/146 (84.93%), Query Frame = 3 Query: 183 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVAIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIP 617 +PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE RL +KIPEI++VE + ET GLELN+ENIEKVL E+RPYL G GG LELV ID +VKVR+TGPAAGVMTVRVA+TQKLRE IP Sbjct: 82 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRETIP 227
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.408e-21 Identity = 59/147 (40.14%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 171 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVAIDEPIVKVRITGPAAGVMTVRVAVTQKLRE 608 SA LT +N++ VL+++RP+LISDGGNV + ++ VV LKLQGAC SCPSS TM MGIER L EK + + + V DEE ++ E + L+ +RP + GGS+E+++++ V+ GP + M ++ A+ +K ++ Sbjct: 79 SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSVEGEDCVVKYVGPESIGMGIQAAIKEKFKD 223
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein yutI OS=Bacillus subtilis GN=yutI PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.781e-16 Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 198 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 407 E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+E++P +V VE V Sbjct: 41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEEVPGVVEVEQV 110
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NIFU_ANASL (Nitrogen fixation protein nifU (Fragment) OS=Anabaena sp. (strain L31) GN=nifU PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.276e-14 Identity = 38/69 (55.07%), Postives = 55/69 (79.71%), Query Frame = 3 Query: 204 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 407 I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSCPSS T+K+ IE RL ++I + VE+V Sbjct: 44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRINPSLVVEAV 112
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NIFU_ANASP (Nitrogen fixation protein nifU OS=Anabaena sp. (strain PCC 7120) GN=nifU PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.177e-14 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 150 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 407 K P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I + VE+V Sbjct: 210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLVVEAV 300
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NIFU_ANAAZ (Nitrogen fixation protein nifU OS=Anabaena azollae GN=nifU PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.177e-14 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 3 Query: 150 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 407 K P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I + VE+V Sbjct: 210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLVVEAV 300
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 7.003e-13 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 192 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE-ETGLELNEENIEKVLEEIR 473 T I+ +LD IRP + DGG++ +G VV+LK+QG+C SCPSS++T+K G++ L IPE+ +VE V DE + +E E EK L+ ++ Sbjct: 178 TVMMIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRMIESEFERFEKNLKTLK 273
BLAST of DY271288 vs. ExPASy Swiss-Prot
Match: NFU1_DROPE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila persimilis GN=GL13432 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.038e-12 Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 3 Query: 192 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE-ENIEKVLEEIRP--YLVGAAGG 500 T I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L IPE+ +VE V D+ + E E EK L++ P VG GG Sbjct: 174 TVMMIKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDDADRMADKEFERFEKNLKQKEPAGAPVGIGGG 280 The following BLAST results are available for this feature:
BLAST of DY271288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271288 ID=DY271288; Name=DY271288; organism=Citrus clementina; type=EST; length=986bpback to top |