DY271289

Overview
NameDY271289
Unique NameDY271289
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length977
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271289 vs. ExPASy Swiss-Prot
Match: Y3721_ARATH (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.937e-23
Identity = 79/229 (34.50%), Postives = 114/229 (49.78%), Query Frame = 3 
Query:  132 DSAAAMKMDLSSPFGSNSEKLAIPPS----PVKQAATVNAFR-GLGSKEETFFDSQPWLDSDCEDDFYSVNGDFTPSRGNTPVHHNFAGAPQVNSTSLPDKTPG-SISEPSPTGKKPKLAELFRQISKEGSEDQHVDEQNTQGSQNMANGKTEIRTTILDVLPSANGTPYVSGVNSVCSSERTPNGDSMMEDKPMRT---AQCCLPSFVSCRNS-TDRKKKMNPALPVM 788
            D+ + +   +   F S  +  +IP +    PVK   + ++ +   GSK+ETFFDSQPWL SD +DDF+SVNGDFTPS GNTP        P+ ++    +K P    S P+P  ++ KL ELFR   +E        E+   GS                   SA  TPY+SG NS     R  N  ++ +++  ++      CLP F SC  S  +R+KKM+   PV+
Sbjct:   34 DNVSILSPSVKKSFESPRKSTSIPANNNLTPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTPKSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIRE--------EREESGSS------------------SAISTPYLSGANS-----REFNDTAIEKEEKKKSNWHHHRCLPGFSSCGGSFMERRKKMSSETPVV 231
The following BLAST results are available for this feature:
BLAST of DY271289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3721_ARATH1.937e-2334.50Uncharacterized protein At3g27210 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YH16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271289 ID=DY271289; Name=DY271289; organism=Citrus clementina; type=EST; length=977bp
CTACAGAAGAAGATTTTCTGATGCTAAGAGCGTCGCTGGCTTCTTAGTTT
TATTATACCTTTTGTCAATTTAAATAAAGAGAATTTAGAGACATGGGTTC
GTGCGTATCATCAGCACACAAGAGAACAGCAGACTCAGCCGCTGCCATGA
AAATGGACTTATCATCACCATTTGGGTCCAATAGTGAGAAGCTTGCGATT
CCACCTTCCCCCGTGAAACAAGCGGCGACAGTCAACGCGTTTAGAGGCCT
TGGTAGTAAAGAGGAAACCTTTTTCGATTCTCAACCATGGCTAGATTCTG
ACTGCGAAGATGATTTTTACAGTGTCAATGGAGATTTTACCCCATCTCGT
GGCAATACTCCAGTCCATCACAACTTTGCAGGGGCTCCTCAAGTCAACAG
CACTTCTCTTCCGGACAAAACTCCCGGTTCCATTTCTGAACCATCCCCAA
CAGGAAAGAAACCGAAACTAGCTGAACTGTTCCGGCAAATTTCTAAAGAA
GGTTCAGAAGACCAACATGTTGATGAACAAAACACCCAAGGTAGCCAAAA
CATGGCCAATGGGAAGACAGAAATTAGGACAACTATACTTGATGTACTTC
CATCAGCAAATGGTACCCCATATGTTTCTGGAGTTAACTCTGTGTGTAGT
AGTGAAAGGACTCCTAATGGAGATTCTATGATGGAGGACAAGCCAATGAG
AACGGCACAATGTTGCCTTCCAAGCTTTGTATCATGTCGTAATTCCACTG
ACAGGAAGAAGAAAATGAATCCTGCCCTACCTGTAATGGGTTAACCTTAT
ATTTTGGCCCACAAGGATATGTAAAAGGAAAAAAAGTGGACCCCGAAGAC
CAAATTCAATTTACCCCTCGTCCCCATCATGGTAAATTTTATTTTACATT
TTTTACCCCTCAGGGGATTTTCCGGAAAAAAGGAAAATGTAAAATGGCCC
CAAGGGAAATTTTTTGAATATCAAAGG
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