DY271304

Overview
NameDY271304
Unique NameDY271304
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length813
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 275.404 bits (703), Expect = 2.616e-73
Identity = 136/176 (77.27%), Postives = 152/176 (86.36%), Query Frame = 2
Query:   17 WNARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIGREPSNSYGEENRDFARKVGDKQLGEGAS 544
            WNA+VSDFGLAKLL SE SYVTTRVMGTFGYVAPEYACTGMLNEKSD+YSFGILIMEIITGRNPVDYSRPQGE NLVDWLK+MVG+R+SEEVVDPK+P+ P+SKALKRVLLVALRCVDPDA KRPKMGH+IHMLEA+DLL+RDERR  R+  +    E ++ A      + GE  S
Sbjct:  292 WNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLEAEDLLYRDERRTTRDHGS---RERQETAVVAAGSESGESGS 464          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.552e-54
Identity = 109/178 (61.24%), Postives = 135/178 (75.84%), Query Frame = 2
Query:   17 WNARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIGREPSNSYGEENRDFARKVGDKQLGEGASDT 550
            +NA++SDFGLAKLL S  S++TTRVMGTFGYVAPEYA TG+LNEKSD+YSFG+L++E ITGR+PVDY RP  EVNLV+WLK MVG+R++EEVVDP+L   P+  ALKR LLV+LRCVDP+A KRP+M  V  MLE+D+  F  ERR  R  S + G E      +  D+ LG   S+T
Sbjct:  321 FNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESDEHPFHKERRNKR--SKTAGME----IVETKDESLGPSGSET 492          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.041e-29
Identity = 62/135 (45.93%), Postives = 93/135 (68.89%), Query Frame = 2
Query:   23 ARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLEAD 427
            ARVSDFGLAKLL  E S++TT V GTFGY+APEY  +G   EK+DVYSFG+L++E+++G+ P D S  +  +N+V WLK ++  ++  ++VDP    M   ++L  +L +A +CV P   +RP M  V+ +LE++
Sbjct:  443 ARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEGM-QMESLDALLSIATQCVSPSPEERPTMHRVVQLLESE 576          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.661e-27
Identity = 75/194 (38.66%), Postives = 105/194 (54.12%), Query Frame = 2
Query:   17 WNARVSDFGLAKL-LCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGS-RKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIGREPSNSYGEENRD--FARKVGDKQLGEGASDTSEGDGSRNNHRP 586
            ++ ++SDFGLAKL    ++S+V+TRVMGT+GY APEYA TG L  KSDVYSFG++ +E+ITGR  +D   P GE NLV W + +    RK  ++ DP+L     ++AL + L VA  C+   A  RP +  V+  L               +PS      NRD   AR +     G G+    + +GS     P
Sbjct:  225 FHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSY-------LANQAYDPSKDDSRRNRDERGARLITRNDDGGGSGSKFDLEGSEKEDSP 411          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.661e-27
Identity = 64/137 (46.72%), Postives = 91/137 (66.42%), Query Frame = 2
Query:   17 WNARVSDFGLAKL-LCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKT-MVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            +NA++SDFGLAK     ++S+V+TRVMGT GY APEY  TG L  KSDVYSFG++++E+++GR  VD +RP GE NLV+W K  +V  RK   V+D +L    + +   +V  ++LRC+  +   RP M  V+  LE
Sbjct:  215 YNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLE 351          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.077e-26
Identity = 59/134 (44.03%), Postives = 86/134 (64.18%), Query Frame = 2
Query:   20 NARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            NA++SDFGLAKL   E ++++TR+ GT GY+APEYA  G L +K+DVYSFG++ +EI++G++  +Y   +  V L+DW   +       E+VDP L    + K   R+L +AL C +P  T RP M  V+ MLE
Sbjct:  808 NAKISDFGLAKLNDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLE 941          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.077e-26
Identity = 59/135 (43.70%), Postives = 90/135 (66.67%), Query Frame = 2
Query:   23 ARVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLEAD 427
            ARVSDFGLAKLL  E S++TT V GTFGY+APEY  +G   EK+DVYSFG+L++E+++G+ P D S  +   N+V WL  ++   +++E+VD     +   ++L  +L +A +CV     +RP M  V+ +LE++
Sbjct:  441 ARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCEGV-ERESLDALLSIATKCVSSSPDERPTMHRVVQLLESE 574          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.837e-26
Identity = 62/136 (45.59%), Postives = 90/136 (66.18%), Query Frame = 2
Query:   17 WNARVSDFGLAKL-LCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGS-RKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHML 418
            +NA++SDFGLA+     E+SYV+TRVMGTFGY APEY  TG LN +SDVYSFG++++E++ GR  +D++RP  E NLVDW +  + S RK   +VD +L      +   R+  +A++C+  +   RP M  V+  L
Sbjct:  209 FNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRAL 344          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.837e-26
Identity = 72/186 (38.71%), Postives = 112/186 (60.22%), Query Frame = 2
Query:   23 ARVSDFGLAKLLCSER-SYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSRKSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRIGREPSNSYGEENRDFARKVGDKQLGEGASDTSEGDGSRNN 577
            A+V+DFG +K    E  SYV+  V GT GY+ PEY  T  L+EKSDV+SFG++++EI++GR P++  RP+ E +LV+W K  + + K +E+VDP +     ++AL RV+ VAL+C++P +T RP M  ++  LE D L+  +      +  +S G  NR     V DK+     + T+E   +  N
Sbjct:  735 AKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELE-DALIIENNASEYMKSIDSLGGSNR--YSIVMDKRALPSTTSTAESTITTQN 917          
BLAST of DY271304 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.837e-26
Identity = 57/137 (41.61%), Postives = 93/137 (67.88%), Query Frame = 2
Query:   17 WNARVSDFGLAKL-LCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIITGRNPVDYSRPQGEVNLVDWLKTMVGSR-KSEEVVDPKLPKMPASKALKRVLLVALRCVDPDATKRPKMGHVIHMLE 421
            ++A++SDFGLAKL    E+S+VTTR+MGT+GY APEY  TG L  KSDV++FG++++EI+TG    +  RP+G+ +LVDWL+  + ++ + ++++D  +     +K    +  + L C++PD   RP M  V+ +LE
Sbjct:  230 YDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLE 366          
The following BLAST results are available for this feature:
BLAST of DY271304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
Y1154_ARATH2.616e-7377.27Probable serine/threonine-protein kinase At1g01540... [more]
Y2296_ARATH3.552e-5461.24Probable receptor-like protein kinase At2g42960 OS... [more]
FEI1_ARATH1.041e-2945.93LRR receptor-like serine/threonine-protein kinase ... [more]
PBS1_ARATH1.661e-2738.66Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
APK1A_ARATH1.661e-2746.72Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5343_ARATH1.077e-2644.03Probable LRR receptor-like serine/threonine-protei... [more]
FEI2_ARATH1.077e-2643.70LRR receptor-like serine/threonine-protein kinase ... [more]
Y3545_ARATH1.837e-2645.59Probable receptor-like protein kinase At3g55450 OS... [more]
NORK_PEA1.837e-2638.71Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CX32_ARATH1.837e-2641.61Probable serine/threonine-protein kinase Cx32, chl... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YI11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271304 ID=DY271304; Name=DY271304; organism=Citrus clementina; type=EST; length=813bp
CTACTTGATCGCTTTATGGAATGCTAGGGTTTCTGATTTTGGGCTTGCTA
AGCTTTTATGTTCAGAGAGGAGTTATGTAACAACCCGTGTGATGGGAACG
TTTGGTTATGTTGCACCAGAGTATGCATGCACTGGGATGCTGAATGAGAA
GAGTGATGTTTATAGTTTTGGTATACTTATAATGGAGATAATTACTGGGA
GAAATCCTGTTGATTATAGTCGACCACAAGGAGAGGTGAATTTGGTTGAT
TGGTTAAAAACCATGGTTGGGAGTCGAAAATCTGAGGAGGTAGTTGATCC
TAAACTGCCCAAGATGCCTGCTTCTAAAGCACTTAAACGTGTTCTGTTGG
TTGCTCTGCGATGTGTGGATCCTGATGCAACAAAGAGGCCCAAAATGGGG
CATGTAATACACATGCTTGAGGCAGATGACTTGTTATTTCGTGATGAACG
TCGAATCGGAAGAGAACCTTCAAACTCATATGGTGAAGAGAATCGTGATT
TTGCAAGAAAAGTAGGTGATAAACAATTGGGTGAAGGCGCTTCGGATACA
AGTGAAGGTGATGGCAGTAGGAACAATCATCGACCAACCATGCGGCGATA
GCACCAGCAGAGAATTAGGTGACTAATTATTATCGTCTCCACTTTGGAAA
GTTTGCTTTTCTTATTCTATTATTTAGATTTCTTCTTGTACCCTTAAATC
AAAAATACCTATGATTTGCAAATTCTTTTACATAAATATTTTTTTTCTTT
TTTTCAGTTTTACATTCCCCCAATTGGGGATGCTTTTTGATAATTTTAAA
AAATTCTTTCCAT
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