DY271306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-18 Identity = 68/224 (30.36%), Postives = 99/224 (44.20%), Query Frame = 2 Query: 110 MLRLASRIASNVRLPNNN--------RLSWRRNYAHAGKDNNYGADD-VIQRPMLSELITNKDLN--------VIEESFLAS----------------------GARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQA-STFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 M R A+ +AS R ++ RL+W RNYA KD +G + + + EL + VIE+SF A GA VK+ N + G V++ A+ +V A ++ D+ G+ +AVDAV L+ A+ ST EEI+QVGT +ANG + IGEL A A ++VG+ G I D +E V Sbjct: 1 MYRAAASLASKARQAGSSSAARQVGSRLAWSRNYA--AKDIKFGVEARALMLRGVEELADAVKVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEV 222 HSP 2 Score: 45.0542 bits (105), Expect = 2.559e-18 Identity = 36/105 (34.29%), Postives = 51/105 (48.57%), Query Frame = 3 Query: 651 KVEFFNFMKLKWRPVSSYF-TNQKAKDCVLENPFFLILENMIVSQNIVEQAIARA--DSRPLLIGGEDG*KKLKGSLIRGKTGLQNKVSMAKP------RKTNMK 938 ++E MKL +S YF TN KA+ C LE+P LI + + + + V + + A RPLLI ED + G+LI K KV K RK N++ Sbjct: 219 ELEVVEGMKLDRGYISPYFITNSKAQKCELEDPLILIHDKKVTNMHAVVKVLEMALKKQRPLLIVAEDVESEALGTLIINKLRAGIKVCAVKAPGFGENRKANLQ 323
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.324e-12 Identity = 64/222 (28.83%), Postives = 100/222 (45.05%), Query Frame = 2 Query: 110 MLRLASRIASNVRLPNN------NRLSWRRNYAHAGKDNNYGADD--------------------------VIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQA-STFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 M R A+ +AS RL N +R +WRRNYA KD +G + VI++ + +T + V ++ GA VK+ N + G +++ A+ +V + ++ D+ G+ +AVD+V L+ RA+ ST EEI+QVGT +ANG + IGEL A A ++VG+ G I D +E V Sbjct: 1 MHRFATGLASKARLARNGANQIASRSNWRRNYA--AKDVKFGVEARGLMLKGVEDLADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGTTCATILTKAIFTEGCKSVASGMNAMDLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDNELEV 220
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH601_VIBPA (60 kDa chaperonin 1 OS=Vibrio parahaemolyticus GN=groL1 PE=3 SV=2) HSP 1 Score: 56.225 bits (134), Expect = 5.993e-12 Identity = 42/152 (27.63%), Postives = 73/152 (48.03%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILR-CRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSE 652 G + V+ + + IT ++V +E+ F GA+ VKE + + G V++ A+ L AV A ++P D+ G+ AV A E L+ + + + I+QVGT +AN + +G + A A +RVG G + + + E Sbjct: 35 GRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAAVEQLKELSVECNDTKAIAQVGTISANSDASVGNIIAEAMERVGRDGVITVEEGQALQDE 186 HSP 2 Score: 35.8094 bits (81), Expect = 5.993e-12 Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 693 VSSYF-TNQKAKDCVLENPFFLILENMIVSQNIVE-----QAIARADSRPLLIGGED 845 +S YF NQ+A LENPF L+++ I NI E +A+A+A SRPLLI ED Sbjct: 200 LSPYFINNQEAGSVELENPFILLVDKKI--SNIRELLPTLEAVAKA-SRPLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH601_VIBVY (60 kDa chaperonin 1 OS=Vibrio vulnificus (strain YJ016) GN=groL1 PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.010e-11 Identity = 42/139 (30.22%), Postives = 71/139 (51.08%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQ-ASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHG 613 G + V+ + + IT ++V +E+ F GA+ VK+ + + G V++ A+ L AV A ++P D+ G+ AV A E L+ ++ ST EI QVGT +AN + +G++ A A ++VG G Sbjct: 35 GRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKQVASQANDVAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSKDCSTSTEIEQVGTISANSDSSVGKIIAEAMEKVGRDG 173 HSP 2 Score: 32.7278 bits (73), Expect = 1.010e-11 Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 693 VSSYF-TNQKAKDCVLENPFFLILENMIVSQNIVE-----QAIARADSRPLLIGGED 845 +S YF NQ++ LE+PF L+++ I NI E +A+A+A SRPLLI ED Sbjct: 200 LSPYFINNQESGSVELESPFILLVDKKI--SNIRELLPALEAVAKA-SRPLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH601_VIBVU (60 kDa chaperonin 1 OS=Vibrio vulnificus GN=groL1 PE=3 SV=2) HSP 1 Score: 58.5362 bits (140), Expect = 1.010e-11 Identity = 42/139 (30.22%), Postives = 71/139 (51.08%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQ-ASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHG 613 G + V+ + + IT ++V +E+ F GA+ VK+ + + G V++ A+ L AV A ++P D+ G+ AV A E L+ ++ ST EI QVGT +AN + +G++ A A ++VG G Sbjct: 35 GRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKQVASQANDVAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSKDCSTSTEIEQVGTISANSDSSVGKIIAEAMEKVGRDG 173 HSP 2 Score: 32.7278 bits (73), Expect = 1.010e-11 Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 693 VSSYF-TNQKAKDCVLENPFFLILENMIVSQNIVE-----QAIARADSRPLLIGGED 845 +S YF NQ++ LE+PF L+++ I NI E +A+A+A SRPLLI ED Sbjct: 200 LSPYFINNQESGSVELESPFILLVDKKI--SNIRELLPALEAVAKA-SRPLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_VIBHB (60 kDa chaperonin OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=groL PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 1.311e-11 Identity = 41/152 (26.97%), Postives = 73/152 (48.03%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILR-CRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSE 652 G + V+ + + IT ++V +E+ F GA+ VKE + + G V++ A+ L AV A ++P D+ G+ AV A E L+ + + + I+QVGT +AN + +G + A A ++VG G + + + E Sbjct: 35 GRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEQLKELSVECNDTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQALQDE 186 HSP 2 Score: 35.8094 bits (81), Expect = 1.311e-11 Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 693 VSSYF-TNQKAKDCVLENPFFLILENMIVSQNIVE-----QAIARADSRPLLIGGED 845 +S YF NQ+A LENPF L+++ + NI E +A+A+A SRPLLI ED Sbjct: 200 LSPYFINNQEAGSVELENPFILLIDKKV--SNIRELLPALEAVAKA-SRPLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH601_VIBHA (60 kDa chaperonin 1 OS=Vibrio harveyi GN=groL1 PE=3 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 2.210e-11 Identity = 41/152 (26.97%), Postives = 73/152 (48.03%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNV-----IEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAV-DAVAEILRCRAQASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSE 652 G + V+ + + IT ++V +E+ F GA+ VKE + + G V++ A+ L AV A ++P D+ G+ AV AV + R + + + I+QVGT +AN + +G + A A ++VG G + + + E Sbjct: 35 GRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVIAAVEQPKRASVECTDTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEGQALQDE 186 HSP 2 Score: 35.4242 bits (80), Expect = 2.210e-11 Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 693 VSSYF-TNQKAKDCVLENPFFLILENMIVSQNIVE-----QAIARADSRPLLIGGED 845 +S YF NQ+A LENPF L+++ + NI E +A+A+A SRPLLI ED Sbjct: 200 LSPYFINNQEAGSVDLENPFILLIDKKV--SNIRELLPALEAVAKA-SRPLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH602_VIBVY (60 kDa chaperonin 2 OS=Vibrio vulnificus (strain YJ016) GN=groL2 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.871e-11 Identity = 47/155 (30.32%), Postives = 79/155 (50.97%), Query Frame = 2 Query: 203 DNNYGADDVIQRPM-LSELITNKDLNVIEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQ-ASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 D +YGA + + + +++ I KD F GA+ VK+ + + G V++ A+ L AV A ++P D+ G+ AVD+ E LR AQ S E I+QVG+ +AN ++ IG++ A A ++VG +G + + +E V Sbjct: 41 DKSYGAPSITKDGVSVAKAIELKD------KFENMGAQMVKQVASKANDEAGDGTTTATVLAQALINEGLKAVAAGMNPMDLKRGIDKAVDSAVEKLRAMAQPCSDKESITQVGSISANSDRAIGDIIAEAMEKVGRNGVITVEEGQGLSNELSV 189 HSP 2 Score: 28.1054 bits (61), Expect = 2.871e-11 Identity = 21/55 (38.18%), Postives = 33/55 (60.00%), Query Frame = 3 Query: 693 VSSYF-TNQKAKDCVLENPFFLILENMIVSQN---IVEQAIARADSRPLLIGGED 845 +S YF TNQ + L+NP+ L+++ + S V +++A+A SR LLI ED Sbjct: 200 LSPYFITNQDSGAVELDNPYILLVDKKVSSIRELLPVLESVAKA-SRSLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH602_VIBVU (60 kDa chaperonin 2 OS=Vibrio vulnificus GN=groL2 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.871e-11 Identity = 47/155 (30.32%), Postives = 79/155 (50.97%), Query Frame = 2 Query: 203 DNNYGADDVIQRPM-LSELITNKDLNVIEESFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQ-ASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKSKSESRV 661 D +YGA + + + +++ I KD F GA+ VK+ + + G V++ A+ L AV A ++P D+ G+ AVD+ E LR AQ S E I+QVG+ +AN ++ IG++ A A ++VG +G + + +E V Sbjct: 41 DKSYGAPSITKDGVSVAKAIELKD------KFENMGAQMVKQVASKANDEAGDGTTTATVLAQALINEGLKAVAAGMNPMDLKRGIDKAVDSAVEKLRAMAQPCSDKESITQVGSISANSDRAIGDIIAEAMEKVGRNGVITVEEGQGLSNELSV 189 HSP 2 Score: 28.1054 bits (61), Expect = 2.871e-11 Identity = 21/55 (38.18%), Postives = 33/55 (60.00%), Query Frame = 3 Query: 693 VSSYF-TNQKAKDCVLENPFFLILENMIVSQN---IVEQAIARADSRPLLIGGED 845 +S YF TNQ + L+NP+ L+++ + S V +++A+A SR LLI ED Sbjct: 200 LSPYFITNQDSGAVELDNPYILLVDKKVSSIRELLPVLESVAKA-SRSLLIIAED 253
BLAST of DY271306 vs. ExPASy Swiss-Prot
Match: CH60_AZOSE (60 kDa chaperonin OS=Azoarcus sp. (strain EbN1) GN=groL PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 3.723e-11 Identity = 45/149 (30.20%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 215 GADDVIQRPMLSELITNKDLNVIEE-----SFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAVDAVAEILRCRAQ-ASTFEEISQVGTAAANGNKIIGELAAMACQRVGEHGHYIIRDNGKS 643 G + V++R + +T ++V +E F GA+ VKE + + G V++ ++ + V A ++P D+ G+ AV AV E L+ ++ ST +EI+QVG+ +AN + IGE+ A + +VG+ G + D GKS Sbjct: 35 GRNVVLERSFGAPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDIAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGIDKAVIAVTEELKKLSKPCSTNKEIAQVGSISANSDADIGEIIAKSMDKVGKEGVITVED-GKS 182 HSP 2 Score: 31.5722 bits (70), Expect = 3.723e-11 Identity = 24/57 (42.11%), Postives = 31/57 (54.39%), Query Frame = 3 Query: 693 VSSYFTNQKAKD-CVLENPFFLILENMIVSQNI-----VEQAIARADSRPLLIGGED 845 +S YF N K +LENPF L+ + I NI V + +A+A RPLLI ED Sbjct: 200 LSPYFINNPDKQVAILENPFILLFDKKI--SNIRDLLPVLEQVAKA-GRPLLIVAED 253 The following BLAST results are available for this feature:
BLAST of DY271306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271306 ID=DY271306; Name=DY271306; organism=Citrus clementina; type=EST; length=955bpback to top |