DY271309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271309 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.338e-58 Identity = 126/235 (53.62%), Postives = 155/235 (65.96%), Query Frame = 2 Query: 53 MRVSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLSSESA-------LQAGDIRHVSKDEXXXXXXXGSDKLHKVKSRRFKR-SAPKPRSKPERAADAKVVEPLLDNSGGESTSCDPELTQRDSGESDSVSVETVEATLAKTDGGADGS-DVDLELSL 730 MR+SCNGCRVLRKGC E+CSIRPCL WIKSP+ QANAT+FLAKFYGRAGL+NLINAGP LRP IF+SLL+EACGRIVNPIYGSVGL+WSG W LCQ AVEAV +GEPV +++++A L+ DIRH+SKD+ GS L K+RR KR S +++ E +D + S S S E+ GES S V LA + GS ++ L+L+L Sbjct: 1 MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIGQGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRRAKRVSTVAIQAESEGKSD--------EASHDSSLSHQSEIVAAHEGESKE-SESNVSEVLAFSPPAVKGSGEIKLDLTL 226
BLAST of DY271309 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.758e-56 Identity = 110/182 (60.44%), Postives = 129/182 (70.88%), Query Frame = 2 Query: 53 MRVSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLSSESAL---------QAGDIRHV-SKDEXXXXXXXGSDKLHKVKSRRFKRSAPKPRSKPERAADAKVVEP 568 MR+SCNGCRVLRKGC ENCSIRPCLQWIKS + QANAT+FLAKFYGRAGL+NL+N GP LRPAIF+SLLYEACGRIVNPIYGSVGL+WSG WHLCQAAVEAV RG PVTP++ ++A+ + DIRHV S+DE G+ K + R + P + + EP Sbjct: 1 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTGQAPPFNNKLCDIRHVSSRDENVKRRSRGACKEER-NVRSLSHESSLSHESPVSSEETTTEEP 181
BLAST of DY271309 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.901e-50 Identity = 98/138 (71.01%), Postives = 110/138 (79.71%), Query Frame = 2 Query: 53 MRVSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPV--TPLSSESAL-------QAGDIRHVSKD 439 MR+SCNGCRVLRKGC ++C+IRPCLQWIKS QANATLFLAKFYGRAGL+NLI +GP LRPAIF+SLLYEACGRIVNP+ GSVGLMWSG W CQAAV+AV G P+ TPL S SA + DIRHV+KD Sbjct: 1 MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASASHQIIPPHRTYDIRHVAKD 138
BLAST of DY271309 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.802e-40 Identity = 70/110 (63.64%), Postives = 93/110 (84.55%), Query Frame = 2 Query: 59 VSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPL 388 +SCNGCRVLRKGC ENC +RPC+QWI+SP+ Q +AT+F+AKF+GRAGL++ I+A P+ PA+F+SLLYEACGR VNP+ G+VGL+W+G W++CQAAVE V RG + P+ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI 110
BLAST of DY271309 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 3.098e-39 Identity = 67/110 (60.91%), Postives = 91/110 (82.73%), Query Frame = 2 Query: 59 VSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPL 388 +SCNGCRVLRKGC ENC +RPC+QWI++ Q +AT+F+AKF+GRAGL++ I+A P RPA+F+SLLYEACGR VNP+ G++G++W+G W++CQAAVE V RG + P+ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110
BLAST of DY271309 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.538e-38 Identity = 68/111 (61.26%), Postives = 92/111 (82.88%), Query Frame = 2 Query: 59 VSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLS 391 +SCNGCRVLRKGC E C +RPCLQWI+S + Q +AT+F+AKF+GRAGL++ I++ P+ RPA+F+SLL+EACGR VNP+ G+VG++W+ WH+CQAAVE V RG + P+S Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPIS 111 The following BLAST results are available for this feature:
BLAST of DY271309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271309 ID=DY271309; Name=DY271309; organism=Citrus clementina; type=EST; length=941bpback to top |