DY271358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271358 vs. ExPASy Swiss-Prot
Match: XPO1_DICDI (Exportin-1 OS=Dictyostelium discoideum GN=xpo1 PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 5.662e-22 Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = 3 Query: 162 HLTHPTDVALLDPTVAALDGTGSNE-DITAAHHIARDLPNNPEMWLLLMHILRNSKYPSTTFFPLPVLERLIKYRWNSLPAEHRHGMNNYISDLIVRLSC-TEASFREDRHVRHL 500 + P D+ LLD V+ L SN+ DI AA + +P+ W + IL SK T F L +++ LIKYRW SLP E G+ NYI LI+RLS + S RE V L Sbjct: 6 NFNEPLDINLLDQIVSVLYNPLSNKNDIKAAQMVLGKFQEHPDAWSKVDTILETSKIVQTKFIALVIMDSLIKYRWKSLPREQCEGIKNYIVSLIIRLSSDPQTSSREKLLVNKL 120 HSP 2 Score: 51.6026 bits (122), Expect = 5.662e-22 Identity = 26/73 (35.62%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 502 LNIIMIQILKHDCPARWLSFLPDLAAAAKTSETFSEICMATLKLLNVEVFDSS*C*MT*PNISQLKQSLNSGF 720 LN++ +QILK + W +F+P++ +++KT+E+ E M L+LL+ E+F+ S MT I LK + F Sbjct: 120 LNLVFVQILKQEWTTNWSTFIPEIISSSKTNESLCENNMVILRLLSEEIFNFSEEQMTQTKIQTLKITFEKEF 192
BLAST of DY271358 vs. ExPASy Swiss-Prot
Match: XPO1_SCHPO (Exportin-1 OS=Schizosaccharomyces pombe GN=xpo1 PE=1 SV=3) HSP 1 Score: 63.1586 bits (152), Expect = 2.025e-19 Identity = 35/103 (33.98%), Postives = 52/103 (50.49%), Query Frame = 3 Query: 180 DVALLDPTVAAL-DGTGSNEDITAAHHIARDLPNNPEMWLLLMHILRNSKYPSTTFFPLPVLERLIKYRWNSLPAEHRHGMNNYISDLIVRLSCTEASFREDR 485 DVALLD V G G+ + A + +P+ W IL S+YP T + L VL++LI RW LP E R G+ NYI ++++ S E ++ + Sbjct: 12 DVALLDRVVQTFYQGVGAEQQ--QAQQVLTQFQAHPDAWSQAYSILEKSEYPQTKYIALSVLDKLITTRWKMLPKEQRLGIRNYIVAVMIKNSSDETVLQQQK 112 HSP 2 Score: 48.521 bits (114), Expect = 2.025e-19 Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 1 Query: 502 LNIIMIQILKHDCPARWLSFLPDLAAAAKTSETFSEICMATLKLLNVEVFDSS*C*MT*PNISQLKQSLNSGF 720 L++ ++QILK + P W +F+P++ A+KT+ + E M L+LL+ E+FD S MT LK + F Sbjct: 118 LDLTLVQILKQEWPHNWPNFIPEIVQASKTNLSLCENNMIVLRLLSEEIFDYSAEQMTQLKTKNLKNQMCGEF 190 HSP 3 Score: 25.409 bits (54), Expect = 2.025e-19 Identity = 16/47 (34.04%), Postives = 23/47 (48.94%), Query Frame = 3 Query: 726 IQELCCKVRSAPQITRPLRATRSPPDAFPSRKPLGLFFESPIVEATT 866 I +LC ++ Q ++AT F + PLG FE+ IVE T Sbjct: 193 IFQLCSQILERAQKPSLIKATLGTLLRFLNWIPLGYIFETNIVELIT 239
BLAST of DY271358 vs. ExPASy Swiss-Prot
Match: XPO1_RAT (Exportin-1 OS=Rattus norvegicus GN=Xpo1 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.595e-17 Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 475 EKTGMYVI*LNIIMIQILKHDCPARWLSFLPDLAAAAKTSETFSEICMATLKLLNVEVFDSS*C*MT*PNISQLKQSLNSGF 720 EK +Y+ LN+I++QILK + P W +F+ D+ A++TSE+ + M LKLL+ EVFD S +T LK S+ + F Sbjct: 121 EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFDFSSGQITQVKAKHLKDSMCNEF 202 HSP 2 Score: 51.2174 bits (121), Expect = 1.595e-17 Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 3 Query: 180 DVALLDPTVAAL-DGTGSNEDITAAHHIARDLPNNPEMWLLLMHILRNSKYPSTTFFPLPVLERLIKYRWNSLPAEHRHGMNNYISDLIVRLS 455 D+ LLD V L G G+ + + A + L +P+ W + IL S+ +T ++ L +LE +IK RW LP G+ Y+ LI++ S Sbjct: 24 DINLLDNVVNCLYHGEGAQQRM--AQEVLTHLKEHPDAWTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTS 114
BLAST of DY271358 vs. ExPASy Swiss-Prot
Match: XPO1_MOUSE (Exportin-1 OS=Mus musculus GN=Xpo1 PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.595e-17 Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 475 EKTGMYVI*LNIIMIQILKHDCPARWLSFLPDLAAAAKTSETFSEICMATLKLLNVEVFDSS*C*MT*PNISQLKQSLNSGF 720 EK +Y+ LN+I++QILK + P W +F+ D+ A++TSE+ + M LKLL+ EVFD S +T LK S+ + F Sbjct: 121 EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFDFSSGQITQVKAKHLKDSMCNEF 202 HSP 2 Score: 51.2174 bits (121), Expect = 1.595e-17 Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 3 Query: 180 DVALLDPTVAAL-DGTGSNEDITAAHHIARDLPNNPEMWLLLMHILRNSKYPSTTFFPLPVLERLIKYRWNSLPAEHRHGMNNYISDLIVRLS 455 D+ LLD V L G G+ + + A + L +P+ W + IL S+ +T ++ L +LE +IK RW LP G+ Y+ LI++ S Sbjct: 24 DINLLDNVVNCLYHGEGAQQRM--AQEVLTHLKEHPDAWTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTS 114
BLAST of DY271358 vs. ExPASy Swiss-Prot
Match: XPO1_HUMAN (Exportin-1 OS=Homo sapiens GN=XPO1 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.073e-17 Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 1 Query: 475 EKTGMYVI*LNIIMIQILKHDCPARWLSFLPDLAAAAKTSETFSEICMATLKLLNVEVFDSS*C*MT*PNISQLKQSLNSGF 720 EK +Y+ LN+I++QILK + P W +F+ D+ A++TSE+ + M LKLL+ EVFD S +T LK S+ + F Sbjct: 121 EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFDFSSGQITQVKSKHLKDSMCNEF 202 HSP 2 Score: 51.2174 bits (121), Expect = 2.073e-17 Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 3 Query: 180 DVALLDPTVAAL-DGTGSNEDITAAHHIARDLPNNPEMWLLLMHILRNSKYPSTTFFPLPVLERLIKYRWNSLPAEHRHGMNNYISDLIVRLS 455 D+ LLD V L G G+ + + A + L +P+ W + IL S+ +T ++ L +LE +IK RW LP G+ Y+ LI++ S Sbjct: 24 DINLLDNVVNCLYHGEGAQQRM--AQEVLTHLKEHPDAWTRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTS 114
BLAST of DY271358 vs. ExPASy Swiss-Prot
Match: XPO1_YEAST (Exportin-1 OS=Saccharomyces cerevisiae GN=CRM1 PE=1 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.689e-16 Identity = 31/104 (29.81%), Postives = 53/104 (50.96%), Query Frame = 3 Query: 180 DVALLDPTVAALDGTGSNEDITAAHHIARDLPNNPEMWLLLMHILRNSKYPSTTFFPLPVLERLIKYRWNSLPAEHRHGMNNYISDLIVRLSCTEASFREDRHV 491 D+ALLD V+ GS A I +NP+ W IL+ S P + F L +L++LI +W LP +HR G+ N++ +I+ + + F+ +++ Sbjct: 12 DIALLDQVVSTFY-QGSGVQQKQAQEILTKFQDNPDAWQKADQILQFSTNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNL 114 HSP 2 Score: 48.521 bits (114), Expect = 1.689e-16 Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 1 Query: 505 NIIMIQILKHDCPARWLSFLPDLAAAAKTSETFSEICMATLKLLNVEVFDSS*C*MT*PNISQLKQSLNSGF 720 ++ ++QILK + P W F+P+L ++ +S E M LKLL+ EVFD S MT LK S++ F Sbjct: 119 DLTLVQILKQEWPQNWPEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMSKEF 190 The following BLAST results are available for this feature:
BLAST of DY271358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271358 ID=DY271358; Name=DY271358; organism=Citrus clementina; type=EST; length=1076bpback to top |