DY271372

Overview
NameDY271372
Unique NameDY271372
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1006
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF4_ARATH (6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 9.039e-103
Identity = 173/209 (82.78%), Postives = 194/209 (92.82%), Query Frame = 3
Query:  189 NDGFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVLQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDM 815
            +DGFVLEDVPHLT FLPDLPSYPNPLK+SQAYA+VK+TFVS ED VAQNIV+QK S RGVHFRRAGPRE+VYF+SDEV+ACIVTCGGLCPGINTVIREIVCGL+ MYGV+ ILGI+GGYRGFYSKNT+ L+PKVVNDIHKRGGT L+TSRGGHDT KIVDNI+DRGINQVYIIGG GTQKGA  IY+EVE+RG QVAV+GIPKT++ D+
Sbjct:   66 DDGFVLEDVPHLTKFLPDLPSYPNPLKESQAYAIVKRTFVSSEDVVAQNIVVQKGSKRGVHFRRAGPRERVYFRSDEVKACIVTCGGLCPGINTVIREIVCGLNNMYGVNNILGIQGGYRGFYSKNTMNLTPKVVNDIHKRGGTFLQTSRGGHDTAKIVDNIQDRGINQVYIIGGGGTQKGAEKIYEEVERRGLQVAVSGIPKTIDNDI 274          

HSP 2 Score: 33.4982 bits (75), Expect = 9.039e-103
Identity = 16/21 (76.19%), Postives = 17/21 (80.95%), Query Frame = 2
Query:  806 NGYAVNGKSFGFDTAVEEAQK 868
            N  AV  KSFGFDTAVEEAQ+
Sbjct:  272 NDIAVIDKSFGFDTAVEEAQR 292          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF3_ARATH (6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 8.451e-92
Identity = 152/207 (73.43%), Postives = 184/207 (88.89%), Query Frame = 3
Query:  195 GFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVLQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDM 815
            G+VLEDVPHL+++LP LP+YPNPL+ + AY+VVKQ FV  +D+V Q IV+ KD PRG+HFRRAGPR+KVYF+SDEV ACIVTCGGLCPG+NTVIREIV  LSYMYGV  ILGI+GGYRGFY+KNT++L  KVVNDIHKRGGTIL TSRGGHDT KIVD+I+DRGINQVYIIGGDGTQ+GA++I++E+ +RG +VAV GIPKT++ D+
Sbjct:   17 GYVLEDVPHLSDYLPGLPTYPNPLQDNPAYSVVKQYFVDADDSVPQKIVVHKDGPRGIHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYMYGVKRILGIDGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHDTTKIVDSIQDRGINQVYIIGGDGTQRGASVIFEEIRRRGLKVAVIGIPKTIDNDI 223          

HSP 2 Score: 31.5722 bits (70), Expect = 8.451e-92
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  806 NGYAVNGKSFGFDTAVEEAQK 868
            N   V  KSFGFDTAVEEAQ+
Sbjct:  221 NDIPVIDKSFGFDTAVEEAQR 241          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF7_ARATH (6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 5.433e-91
Identity = 148/207 (71.50%), Postives = 184/207 (88.89%), Query Frame = 3
Query:  195 GFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVLQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDM 815
            G++L+DVPHL ++LPDLP+YPNPL+ + AY+VVKQ FV  +D+V + +V+ KD PRGVHFRRAGPR+KVYF+SDEV ACIVTCGGLCPG+NTVIRE+V  LSYMYGV  ILGI+GGYRGFY+KNT+ L+ KVVNDIHKRGGTI+ TSRGGHDTNKIVD+I+DRGINQVYIIGGDGTQ+GA++I++E+ +R  +VAV GIPKT++ D+
Sbjct:   17 GYILQDVPHLIDYLPDLPTYPNPLQDNPAYSVVKQYFVHADDSVPEKVVVHKDGPRGVHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREVVSSLSYMYGVKRILGIDGGYRGFYAKNTIPLNSKVVNDIHKRGGTIIGTSRGGHDTNKIVDSIQDRGINQVYIIGGDGTQRGASVIFEEIRRRRLKVAVVGIPKTIDNDI 223          

HSP 2 Score: 31.5722 bits (70), Expect = 5.433e-91
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  806 NGYAVNGKSFGFDTAVEEAQK 868
            N   V  KSFGFDTAVEEAQ+
Sbjct:  221 NDIPVIDKSFGFDTAVEEAQR 241          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF6_ARATH (6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 9.249e-91
Identity = 149/207 (71.98%), Postives = 182/207 (87.92%), Query Frame = 3
Query:  195 GFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVLQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDM 815
            G+VLEDVPHL++++ DLP+YPNPL+ + AY+VV+Q FV  +D V + IV+ KDSPRG HFRRAGPR+KVYFK  +VRACIVTCGGLCPG+NTVIREIVCGL +MYGV E++G++ G+RGFYSKNT+ L+PK V+DIHKRGGTIL TSRGGHDT+KIVDNI+DR INQVYIIGGDGTQKGA  IYKE+ +RG +VAVAGIPKT++ D+
Sbjct:   18 GYVLEDVPHLSDYILDLPTYPNPLQSNAAYSVVRQYFVDEDDTVQEKIVVHKDSPRGTHFRRAGPRQKVYFKPSDVRACIVTCGGLCPGLNTVIREIVCGLHFMYGVTEVIGVDCGFRGFYSKNTVALTPKTVSDIHKRGGTILGTSRGGHDTSKIVDNIQDREINQVYIIGGDGTQKGANAIYKEIRRRGLKVAVAGIPKTIDNDI 224          

HSP 2 Score: 31.5722 bits (70), Expect = 9.249e-91
Identity = 15/21 (71.43%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  806 NGYAVNGKSFGFDTAVEEAQK 868
            N   V  KSFGFDTAVEEAQ+
Sbjct:  222 NDIPVIDKSFGFDTAVEEAQR 242          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF1_ARATH (6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 5.964e-87
Identity = 146/207 (70.53%), Postives = 177/207 (85.51%), Query Frame = 3
Query:  195 GFVLEDVPHLTNFLPDLPSYPNPLKKSQAYAVVKQTFVSPEDAVAQNIVLQKDSPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDM 815
            G++LEDVPH ++  PD P+YPNPL+ + AY+VVKQ FV  +D V Q IV+  DSPRG HFRRAGPR++VYF+SD+V ACIVTCGGLCPG+NTVIREIVCGLSYMYGV  ILGI+GGYRGFY++NT+ L  K VNDIH+ GGTIL TSRGGH+T KIVD+I+DRGINQVYIIGGDG+QKGAA I++E+ KR  +VAVAGIPKT++ D+
Sbjct:   18 GYILEDVPHFSDDFPDHPTYPNPLQDNAAYSVVKQYFVDEDDTVPQKIVVHPDSPRGTHFRRAGPRQRVYFESDDVLACIVTCGGLCPGLNTVIREIVCGLSYMYGVKRILGIDGGYRGFYARNTIHLDLKTVNDIHRSGGTILGTSRGGHNTTKIVDSIQDRGINQVYIIGGDGSQKGAAAIFEEIRKRKLKVAVAGIPKTIDNDI 224          

HSP 2 Score: 30.0314 bits (66), Expect = 5.964e-87
Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  806 NGYAVNGKSFGFDTAVEEAQK 868
            N   +  +SFGFDTAVEEAQ+
Sbjct:  222 NDIPIIDRSFGFDTAVEEAQR 242          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF2_ARATH (6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.756e-47
Identity = 92/188 (48.94%), Postives = 121/188 (64.36%), Query Frame = 3
Query:  258 NPLKKSQAYAVVKQTFVSPEDAVAQNIVLQKD--SPRGVHFRRAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDM 815
            NPL+ +  +      +++P D +   +       S   V + RAGPR ++ ++   V+A IVTCGGLCPG+NTVIRE+V GL  +YGV EI GI  GYRGFYS   + L PK V+D HK+GGT+L TSRGG    KIVD I   G NQVYIIGGDGT +GA  I+KE+  R  +V +  IPKT++ D+
Sbjct:   21 NPLEDNPYFHPSNGFYITPSDVILAQVAYDHSAHSQSRVAYHRAGPRREIMYEPSAVKAAIVTCGGLCPGMNTVIRELVVGLWELYGVREIYGIPAGYRGFYSMKAVKLDPKAVHDWHKKGGTVLATSRGGFHLQKIVDAIHLNGYNQVYIIGGDGTMRGAVEIFKEISLRKLEVGITVIPKTVDNDV 208          

HSP 2 Score: 25.0238 bits (53), Expect = 7.756e-47
Identity = 11/21 (52.38%), Postives = 14/21 (66.67%), Query Frame = 2
Query:  806 NGYAVNGKSFGFDTAVEEAQK 868
            N   +  +SFGF TAVE AQ+
Sbjct:  206 NDVGIIDRSFGFQTAVEMAQE 226          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF5_ARATH (6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.081e-42
Identity = 82/152 (53.95%), Postives = 112/152 (73.68%), Query Frame = 3
Query:  378 RAGPREKVYFKSDEVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNT--LTLSPKVVNDIHKRGGTILRTSRGGHDTNKIVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDML*ME 827
            RAGPREK+YF+ +EV+A I+TCGGLCPG+N VIR IV  L  +YGV  I+GI  GYRGF  K+   + LS KVV +IH  GG++L  SRGG   ++IVD++E+RGIN ++++GG+GT  GA  I+ E  KR  +VAV G+PKT++ D+L M+
Sbjct:  166 RAGPREKIYFRPEEVKAAIITCGGLCPGLNDVIRHIVITLE-IYGVKNIVGIPFGYRGFSDKDLTEMPLSRKVVQNIHLSGGSLLGVSRGGPSVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRKIKVAVVGVPKTIDNDILHMD 316          

HSP 2 Score: 29.261 bits (64), Expect = 3.081e-42
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  827 KSFGFDTAVEEAQK 868
            K+FGFDTAVEEAQ+
Sbjct:  317 KTFGFDTAVEEAQR 330          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF2_CLOPE (6-phosphofructokinase 2 OS=Clostridium perfringens GN=pfkA2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 8.508e-14
Identity = 51/149 (34.23%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  423 RACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGH--------DTNKI---------VDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDML 818
            +  I+T GG CPG+N VIR +       YG  E++G + GYRG Y+ + + L    V+ I  RGGTIL +S   +        +  KI         V+N++  G++ + +IGGDGT   A    ++  ++G  V V G+PKT++ D+L
Sbjct:    7 KIAILTGGGDCPGLNAVIRAVTRTAILKYGY-EVIGYKFGYRGLYNNDFVKLDLDSVSGILHRGGTILHSSNKDNLFDYQVEDENGKIVKKDVSDVGVENLKKEGVDALVVIGGDGTLTSA----RDFSRKG--VNVIGVPKTIDNDLL 148          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF_HAMD5 (6-phosphofructokinase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=pfkA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.223e-13
Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  423 RACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNK-----IVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDM 815
            R  ++T GG  PG+N  IR +V   S ++   E+ GI  GY+G Y      L+   V+DI  RGGTIL ++R    T K      + N+   GI+ + +IGGDG+  GA L+ KE       +   G+P T++ D+
Sbjct:    4 RIGVLTSGGDAPGMNAAIRGVV--RSTLFKNKEVFGIYDGYQGLYDNQIQQLNRYSVSDIINRGGTILGSARFPEFTQKENRARAIKNLNSHGIDALVVIGGDGSYAGAELLAKE-----GGIHCVGLPGTIDNDV 132          
BLAST of DY271372 vs. ExPASy Swiss-Prot
Match: K6PF_FUSNN (6-phosphofructokinase OS=Fusobacterium nucleatum subsp. nucleatum GN=pfkA PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.223e-13
Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 3
Query:  417 EVRACIVTCGGLCPGINTVIREIVCGLSYMYGVDEILGIEGGYRGFYSKNTLTLSPKVVNDIHKRGGTILRTSRGGHDTNK-----IVDNIEDRGINQVYIIGGDGTQKGAALIYKEVEKRGPQVAVAGIPKTMEMDM 815
            E +  I+T GG  PG+N  IR       Y YG  E+ GI  GY G  +     ++ + V+ I  +GGT+L T+R              +N++ +GIN + +IGGDG+ +GA L+YKE       + V GIP T++ D+
Sbjct:    2 EKKLAILTSGGDAPGMNAAIRATAKIAEY-YGF-EVYGIRRGYLGMLNDEIFPMTGRFVSGIIDKGGTVLLTARSEEFKEARFREIAANNLKKKGINYLVVIGGDGSYRGANLLYKE-----HGIKVVGIPGTIDNDI 132          
The following BLAST results are available for this feature:
BLAST of DY271372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
K6PF4_ARATH9.039e-10382.786-phosphofructokinase 4, chloroplastic OS=Arabidop... [more]
K6PF3_ARATH8.451e-9273.436-phosphofructokinase 3 OS=Arabidopsis thaliana GN... [more]
K6PF7_ARATH5.433e-9171.506-phosphofructokinase 7 OS=Arabidopsis thaliana GN... [more]
K6PF6_ARATH9.249e-9171.986-phosphofructokinase 6 OS=Arabidopsis thaliana GN... [more]
K6PF1_ARATH5.964e-8770.536-phosphofructokinase 1 OS=Arabidopsis thaliana GN... [more]
K6PF2_ARATH7.756e-4748.946-phosphofructokinase 2 OS=Arabidopsis thaliana GN... [more]
K6PF5_ARATH3.081e-4253.956-phosphofructokinase 5, chloroplastic OS=Arabidop... [more]
K6PF2_CLOPE8.508e-1434.236-phosphofructokinase 2 OS=Clostridium perfringens... [more]
K6PF_HAMD54.223e-1335.296-phosphofructokinase OS=Hamiltonella defensa subs... [more]
K6PF_FUSNN4.223e-1334.786-phosphofructokinase OS=Fusobacterium nucleatum s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YM05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271372 ID=DY271372; Name=DY271372; organism=Citrus clementina; type=EST; length=1006bp
TTTCATCTCGTTCACTTTCTCGATCTGCTTCTCCATCTATATCTCCGTTC
AACTCCAAAAGAATGATACTGAATCCAGTTTTTCATAAATTCAGTTTCGA
TTCCAGAAACTTCAAAATAAAGCCGTTGGTTTCGCGCCAAAATCGACCGG
CGGTGGTGGCAGTTCGTGCTTCTAATCAAAACGTCCATAATGACGGTTTC
GTCCTCGAGGATGTCCCTCACTTGACTAATTTTCTCCCCGATTTACCGTC
ATACCCGAATCCACTGAAAAAGAGTCAAGCATATGCTGTCGTCAAGCAAA
CATTCGTTAGCCCAGAAGATGCAGTTGCCCAAAATATAGTTTTACAGAAA
GATAGTCCTAGAGGAGTTCATTTTCGGCGTGCTGGCCCACGAGAGAAGGT
GTATTTCAAGTCGGATGAAGTTCGTGCTTGCATAGTGACTTGTGGTGGCT
TATGCCCAGGGATTAATACGGTCATTCGGGAGATAGTCTGCGGCTTGAGT
TACATGTATGGGGTTGATGAAATACTTGGAATTGAGGGAGGATACCGAGG
TTTTTACTCTAAAAACACCTTGACATTGTCTCCGAAAGTTGTAAATGATA
TCCATAAACGCGGTGGCACCATTCTTCGCACTTCACGAGGAGGCCATGAC
ACCAACAAGATAGTTGACAATATTGAAGATAGGGGAATAAATCAGGTGTA
CATAATTGGGGGTGATGGTACTCAGAAAGGAGCCGCTTTAATCTACAAGG
AAGTTGAGAAGCGTGGCCCTCAAGTGGCAGTTGCTGGGATACCCAAGACT
ATGGAAATGGATATGCTGTGAATGGAAAATCGTTTGGTTTTGATACGGCG
GTTGAAGAAGCTCAAAAGGGCCCTTAATGCTGCCCATGGGGAAATGGGAA
AGTGTAAAAAAATGGAATTGGAATTGGCAAAATGGAGGGGGAAAATCACG
GGGTTTTCCTTTTCTTATGTATGCAACTTTTGGGCAAGAAAAAAATTGGG
GACCGG
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