DY271383

Overview
NameDY271383
Unique NameDY271383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length971
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.856e-32
Identity = 80/179 (44.69%), Postives = 107/179 (59.78%), Query Frame = 1
Query:  190 VPNAKQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQETRPPRNLMQVCDDKKKIEEYVASLTKDPSFTIAVADAVASSINGPPH 726
            V   K SR++ K ++ D++L+VKDG+QWRKYGQKVT+DNPSPRAYF+C  A S C VKKKVQR +ED+S LVATYEGEHNH +  S +  ++ L  + S   S           S    VT  + +  S + T P   +      K  +E+  +SLTKDP+FT A+A AV   +    H
Sbjct:  124 VVKEKVSRVYYKTEASDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCACAPS-CSVKKKVQRSVEDQSVLVATYEGEHNHPMP-SQIDSNNGLNRHISHGGSASTPVAANRRSSLTVPVT-TVDMIESKKVTSPTSRIDFPQVQKLLVEQMASSLTKDPNFTAALAAAVTGKLYQQNH 299          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.116e-30
Identity = 88/208 (42.31%), Postives = 115/208 (55.29%), Query Frame = 1
Query:  109 NRTYSSSDHHHFXXXXXXXXVTAQVPPVPN----AKQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQ---ETRPPRNLMQVCDDKKKIEEYVASLTKDPSFTIAVADAVASSI 711
            N + +   HHH         + +   PV +    AK S ++V  ++ D+SL VKDG QWRKYGQKVT+DNPSPRAYFRC  A S CPVKKKVQR  ED S LVATYEG HNH      LG ++S  +               T+    S VTLDL ++G ++   E     N MQ    +  I++  +SLTKD  FT A+A A++  +
Sbjct:  123 NSSSNEDHHHHHQQHEQKNQLLSCKRPVTDSFNKAKVSTVYVPTETSDTSLTVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPS-CPVKKKVQRSAEDPSLLVATYEGTHNH------LGPNASEGD--------------ATSQGGSSTVTLDL-VNGCHRLALEKNERDNTMQ----EVLIQQMASSLTKDSKFTAALAAAISGRL 304          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.734e-27
Identity = 86/254 (33.86%), Postives = 124/254 (48.82%), Query Frame = 1
Query:    1 LQAKLEHVRKQNENLRHLVE-------AMNNQCNDLLARIHEANRTYSSSDHHHFXXXXXXXXVTAQVP----PVPN-----AKQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQ-ETRPPRNLMQVCDDKKKIEEYVASLTKDPSFTIAVADAVASSI 711
            LQ ++  V  +N+ L  ++        A+NN   +L +R    +  + +              V++ +     P+ N     A  S  +  A+  D+SL VKDG+QWRKYGQK+T+DNPSPRAYFRC  + S C VKKKVQR  ED SFLVATYEG HNH    +S+ ++                            V LDL   G    E +  R  +Q    +  +++  +SLTKDP FT A+A A++  +
Sbjct:   45 LQDEINRVNSENKKLTEMLARVCEKYYALNNLMEELQSRKSPESVNFQNKQLTGKRKQELDEFVSSPIGLSLGPIENITNDKATVSTAYFAAEKSDTSLTVKDGYQWRKYGQKITRDNPSPRAYFRCSFSPS-CLVKKKVQRSAEDPSFLVATYEGTHNHTGPHASVSRT----------------------------VKLDLVQGGLEPVEEKKERGTIQ----EVLVQQMASSLTKDPKFTAALATAISGRL 265          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.624e-22
Identity = 58/145 (40.00%), Postives = 86/145 (59.31%), Query Frame = 1
Query:  178 QVPPVPNAKQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQETRPPRNLMQ 612
            ++ P    K++R+ V+  S+  +  + DG QWRKYGQK+ K NP PRAY+RC +A+S CPV+K+VQRC ED S L++TYEG HNH +  S+   +S+ +   S   S          D  G    L+ +LSG+N   +P  + +Q
Sbjct:  167 EILPQNLVKKTRVSVR--SRCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAAS-CPVRKQVQRCSEDMSILISTYEGTHNHPLPMSATAMASATSAAASMLLSGASSSSSAAADLHG----LNFSLSGNNITPKPKTHFLQ 304          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.170e-22
Identity = 75/243 (30.86%), Postives = 108/243 (44.44%), Query Frame = 1
Query:  202 KQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTNYCSPKSS-------------------IVHCPDYQTTDSFGS---DVTLDLTLS--GSNQETRPPRNLMQVCDD-------------------------------------------KKKIEEYVASLTKDPSFTIAVADAVASSINGPPHR 729
            +++R+ V+A S+  + ++ DG QWRKYGQK+ K NP PRAY+RC MA  GCPV+K+VQRC ED+S L+ TYEG HNH +  ++   +S+ T   S   S                   I+ C     T S  +    +TLDLT S  G+N        LMQ                                                + +    A++  DP+F  A+A A+ S +NG  H+
Sbjct:  281 RKARVSVRARSE--AAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAG-GCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAATAMASTTTAAASMLLSGSMSSQDGLMNPTNLLARAILPCSSSMATISASAPFPTITLDLTNSPNGNNPNMTTNNPLMQFAQRPGFNPAVLPQVVGQAMYNNQQQSKFSGLQLPAQPLQIAATSSVAESVSAASAAIASDPNFAAALAAAITSIMNGSSHQ 520          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.374e-21
Identity = 47/91 (51.65%), Postives = 69/91 (75.82%), Query Frame = 1
Query:  202 KQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLT 474
            +++R+ V+A S+  + ++ DG QWRKYGQK+ K NP PRAY+RC MA+ GCPV+K+VQRC ED+S L+ TYEG HNH +  +++  +S+ T
Sbjct:  296 RKARVSVRARSE--APMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAT-GCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMASTTT 383          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 3.062e-21
Identity = 74/229 (32.31%), Postives = 108/229 (47.16%), Query Frame = 1
Query:  202 KQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSL---------------GQSSSLTNY------CSPKSSIVHCPDYQTTDSFGS------DVTLDLT------------------------------LSGSNQETRPPRNLMQVCDDKKKIEEYVASLTKDPSFTIAVADAVASSING 717
            +++R+ V+A S  ++  V DG QWRKYGQK+ K NP PRAY+RC MA  GCPV+K+VQRC ED + L  TYEG HNH +  S+                G SSS  +        +  SS  H   Y +T +  S       +TLDLT                              ++ +NQ+   P         ++ ++   A++  DP+FT A+A A+++ I G
Sbjct:  223 RKARVSVRARSDATT--VNDGCQWRKYGQKMAKGNPCPRAYYRCTMA-VGCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPSATAMAATTSAAAAMLLSGSSSSNLHQTLSSPSATSSSSFYHNFPYTSTIATLSASAPFPTITLDLTNPPRPLQPPPQFLSQYGPAAFLPNANQIRSMNNNNQQLLIPNLFGPQAPPREMVDSVRAAIAMDPNFTAALAAAISNIIGG 448          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.822e-21
Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 1
Query:  169 VTAQVPPVPNAKQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLT 474
            V  Q       +++R+ V+A S+   L   DG QWRKYGQK+ K NP PRAY+RC MA  GCPV+K+VQRC ED++ L+ TYEG HNH +  +++  +S+ T
Sbjct:  265 VIEQAAAEATMRKARVSVRARSEAPML--SDGCQWRKYGQKMAKGNPCPRAYYRCTMAV-GCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMNMASTTT 363          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.592e-20
Identity = 52/133 (39.10%), Postives = 76/133 (57.14%), Query Frame = 1
Query:  202 KQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDKSFLVATYEGEHNHDVQCSSLGQSSSLTN----YCSPKSSIVHCPDYQTTDSFGSDVTLDLTLSGSNQET 588
            +++R+ V+A  + +++   DG QWRKYGQK  K NP PRAY+RC +A  GCPV+K+VQRC+ED S L+ TYEG HNH +   +   +S+ +           ++ H   YQT  +  S +      S  N  T
Sbjct:  219 RKARVSVRARCETATM--NDGCQWRKYGQKTAKGNPCPRAYYRCTVAP-GCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTASTSPFLLLDSSDNLSHPSYYQTPQAIDSSLITYPQNSSYNNRT 348          
BLAST of DY271383 vs. ExPASy Swiss-Prot
Match: WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.743e-19
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 1
Query:  202 KQSRIFVKADSKDSSLIVKDGHQWRKYGQKVTKDNPSPRAYFRCLMASSGCPVKKKVQRCMEDK-SFLVATYEGEHNHDV------------QCSSLGQSSSLTNYCSPKSSI-----VHCPDYQTTDSFGSDVTLDLT 564
            K++R+ VKA  +D S  + DG QWRKYGQK  K NP PRAY+RC M SS CPV+K+VQRC E++ S  + TYEG H+H +              +SL QS S ++  S  +S+      H     TT+S  + VTLDLT
Sbjct:  187 KKTRVCVKASCEDPS--INDGCQWRKYGQKTAKTNPLPRAYYRCSM-SSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPLPMEASHMAAGTSAAASLLQSGSSSSSSSTSASLSYFFPFHHFSISTTNSHPT-VTLDLT 321          
The following BLAST results are available for this feature:
BLAST of DY271383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
WRK40_ARATH3.856e-3244.69Probable WRKY transcription factor 40 OS=Arabidops... [more]
WRK18_ARATH2.116e-3042.31WRKY transcription factor 18 OS=Arabidopsis thalia... [more]
WRK60_ARATH3.734e-2733.86Probable WRKY transcription factor 60 OS=Arabidops... [more]
WRK61_ARATH1.624e-2240.00Probable WRKY transcription factor 61 OS=Arabidops... [more]
WRK31_ARATH6.170e-2230.86Probable WRKY transcription factor 31 OS=Arabidops... [more]
WRKY6_ARATH1.374e-2151.65WRKY transcription factor 6 OS=Arabidopsis thalian... [more]
WRK47_ARATH3.062e-2132.31Probable WRKY transcription factor 47 OS=Arabidops... [more]
WRK42_ARATH6.822e-2148.04Probable WRKY transcription factor 42 OS=Arabidops... [more]
WRKY9_ARATH2.592e-2039.10Probable WRKY transcription factor 9 OS=Arabidopsi... [more]
WRK36_ARATH3.743e-1944.60Probable WRKY transcription factor 36 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YM18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271383 ID=DY271383; Name=DY271383; organism=Citrus clementina; type=EST; length=971bp
CTGCAAGCGAAATTGGAACATGTTCGCAAACAGAATGAGAATCTGAGGCA
TCTGGTGGAAGCAATGAATAATCAATGCAATGATCTCCTGGCACGTATCC
ACGAAGCTAATAGAACATATTCCTCCTCTGATCATCATCACTTCAACAAT
AATATTAATATTGGAGGAGTCACAGCACAAGTTCCTCCTGTTCCAAATGC
CAAGCAATCAAGAATCTTTGTGAAAGCAGATTCTAAGGACAGTAGCCTTA
TCGTGAAAGATGGACATCAATGGAGAAAGTACGGCCAAAAGGTTACTAAA
GATAATCCCTCACCTCGGGCTTATTTCAGATGTTTAATGGCTTCTTCTGG
ATGTCCTGTAAAAAAAAAGGTTCAAAGATGCATGGAGGACAAGTCATTTC
TCGTTGCAACTTATGAAGGAGAACACAACCATGATGTTCAATGTAGCTCA
CTTGGGCAATCCTCCTCTTTAACAAATTATTGCTCACCCAAAAGCTCAAT
TGTACATTGCCCAGATTATCAAACAACTGATTCTTTTGGATCAGATGTCA
CACTTGATCTTACTCTATCTGGGTCCAATCAAGAAACTAGACCCCCTAGA
AACTTGATGCAAGTCTGTGACGATAAAAAGAAGATTGAAGAATATGTGGC
ATCCTTAACTAAAGATCCCAGCTTCACCATAGCTGTAGCCGATGCTGTTG
CAAGTTCCATCAATGGCCCCCCACATAGACCAATGTGAACATTTGGGGAC
GGATACATGGATTCTGTATCTTATTTCCTAAATTAAGAATATGTGGCATC
CTTAACTAAAAATCCCAACCTTCCCCATATTTTTACCCCAATGCGGTTGC
AGTTCCCTTCAAGGCCCCCCATAAACCCATGGGAACTTTTGGGGACCGAT
ACCAGGATTCTGTTACCTTATTTCTTAATTAAGGGAATAAAAAAAACCCA
TTAAGTATTTGAGATAATGGG
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