DY271389

Overview
NameDY271389
Unique NameDY271389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length923
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271389 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.757e-47
Identity = 98/180 (54.44%), Postives = 114/180 (63.33%), Query Frame = 2 
Query:  179 EFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASHGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLIXXXXXXXXXXXXXQVLSSRPRLPLTPGGDLMSIPPLRNPSPRREPRFLPFGHHPNFLVSDCSASRSDRLENRD 718
            E  K  +GL+KVVLR +R   AE+YLYGG VTSWKND+GEELLF+SSKA FKPPKAIRGGIPIC PQF +HG+LE HGFARNRFWSID DPP  P N + KA++DLI                  R R+ L P GDL     +RN +    P    F +H  F VSD S  R + LE  D
Sbjct:   25 ELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPHS-FEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMD 203
The following BLAST results are available for this feature:
BLAST of DY271389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AAPC_CENCI1.757e-4754.44Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YN01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271389 ID=DY271389; Name=DY271389; organism=Citrus clementina; type=EST; length=923bp
ATATCTCTCGCTCTACTGAAGTGAGCTAACACTAAGTGAGAGAGATTTCA
TTTTCATATCGAATGCTGTGAATTTTCACATTAAACGAAGAGTAGAAAAT
CTTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCTTCAAAAT
CATGTCGACGGAGAAGTTTCTTCCAGTTGAGTTCTGCAAGGGCAATAACG
GCCTCGACAAGGTCGTTCTCCGCGAGTCACGCGGCAGCTCCGCTGAGGTG
TATTTGTACGGGGGTCATGTGACGTCTTGGAAGAATGATCATGGAGAGGA
ATTGCTTTTTGTCAGTAGTAAGGCTACATTCAAGCCTCCCAAAGCGATTC
GCGGAGGAATTCCAATCTGCTTTCCTCAGTTTGCAAGTCATGGCTCTCTG
GAGTCGCATGGGTTTGCTAGAAATCGATTTTGGAGTATTGACACTGACCC
GCCTGCTTTTCCAACTAATTCCTCGAGTAAGGCTTATATTGATTTGATAC
TAAGGCCCCTCGGAAGAAGATCCTGAAGATCTGGCCCCCAAGTTTTGAGT
TCCCGTCCCAGGCTACCTTTGACTCCCGGTGGTGATCTGATGTCGATCCC
CCCCCTTAGGAACCCTAGCCCTCGCCGGGAACCTCGTTTCCTTCCCTTTG
GCCACCATCCTAACTTCCTCGTCTCCGACTGCAGCGCAAGTCGCTCCGAC
AGATTGGAGAACCGGGATTCCTCCACTGACCGGAAAAAATACGGAGCGCT
CTCCCCGGACGGGGGGCGCCATACACACTTGGACCCATATTGGCTCAAAG
TATAGCCCACTTTCACAAATAAGAAAAGAAGTCATGAATAGACAATCAAA
CACGAACGGATGGACTGCTCGCACGCATACGCCCCCCCCCTAGCACCGTC
GCCCACCTCTCCGGACCCCACCC
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