DY271395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.532e-34 Identity = 81/171 (47.37%), Postives = 112/171 (65.50%), Query Frame = 1 Query: 298 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNG-VPCSTKPMRI 798 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ ++TE G V +KP+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRL 170
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.307e-34 Identity = 80/171 (46.78%), Postives = 112/171 (65.50%), Query Frame = 1 Query: 298 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNG-VPCSTKPMRI 798 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ ++TE G + +KP+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRL 170
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.319e-34 Identity = 81/171 (47.37%), Postives = 111/171 (64.91%), Query Frame = 1 Query: 298 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNG-VPCSTKPMRI 798 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ ++TE G V KP+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRL 170
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 7.368e-34 Identity = 80/171 (46.78%), Postives = 111/171 (64.91%), Query Frame = 1 Query: 298 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNG-VPCSTKPMRI 798 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ TYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ ++TE G V +KP+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRL 170
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 7.368e-34 Identity = 81/171 (47.37%), Postives = 110/171 (64.33%), Query Frame = 1 Query: 298 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNG-VPCSTKPMRI 798 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D TG SKGYGFV+F DE EQ ++TE G V KP+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRL 170
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 3.095e-32 Identity = 76/171 (44.44%), Postives = 108/171 (63.16%), Query Frame = 1 Query: 298 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTE-MNGVPCSTKPMRI 798 SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ +R +Q NG +P + + F+LN+ATYG +R + GP+F++FVGDL ++V DY L + F + S KGAKVVTD G S+GYGFV+F DE+EQ ++ E N KP+RI Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVTD-PYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRI 173
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.896e-32 Identity = 71/171 (41.52%), Postives = 101/171 (59.06%), Query Frame = 1 Query: 298 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE--GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ--DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNGVPCSTKPMRI 798 +LW+GDL+PWM+ ++I ++ E V+ KV+R+K ++ Y F++F S AAAER L +N T +P F+LNWAT G + P+F+IFVGDL D L TFR++Y S AK++ D TG S+ YGFVRF E EQ ++ M G C +P+RI Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRI 256
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.536e-31 Identity = 68/181 (37.57%), Postives = 110/181 (60.77%), Query Frame = 1 Query: 259 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNGVPCSTKPMRI 798 YG + D + +LW+G+L+PW+ E++I ++ G+ V K+IRN+ T + GY F+EF S A + + N +P T F+LNWA+ G E+ +++IFVGDL+ +V ++ + F + Y+S K AK++TD T S+GYGFVRF DE++Q ++ EM G C +P+R+ Sbjct: 81 YGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRV 260
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: TSAP1_DANRE (tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 6.469e-22 Identity = 61/162 (37.65%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 292 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNG 768 + SLW+G+L+P+M+E +I F GE V ++IR+K T + GYGF+E A ER L+ NG +P + + F+L+ + YG +Q + F++FV DL DV D +L E F +SS K+V D G SK GFV F E EQ ++ ++ G Sbjct: 1 MNSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLRKVNGKPLPGATPPKRFKLSRSNYG----KQGESSTFSLFVSDLTPDVDDGMLYEFFHYHFSSCCSGKIVLD-ANGHSKCCGFVSFESEREQKRALVDLQG 157
BLAST of DY271395 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 4.339e-18 Identity = 61/183 (33.33%), Postives = 98/183 (53.55%), Query Frame = 1 Query: 301 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERRQD-----DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLLSMTEMNGVPCSTKPMRI 798 L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S A L NG +P+ + +LNWAT G + +IFVGDLA +VT+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ L+++EM GV + + +++ Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKV 237 The following BLAST results are available for this feature:
BLAST of DY271395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271395 ID=DY271395; Name=DY271395; organism=Citrus clementina; type=EST; length=999bpback to top |