DY271409

Overview
NameDY271409
Unique NameDY271409
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length956
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: CHKB_MOUSE (Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 4.314e-20
Identity = 57/190 (30.00%), Postives = 104/190 (54.74%), Query Frame = 2
Query:  182 DALQVIPLKGAMTNEVYQIAWP---AKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRK-ALLWDRLRKWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDPQEIGFCHNDLQYGNIMIDQETSS 733
            + L V P+ G ++N +++ + P       G  R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E+++ +R L   ++RDP +S  +A +M  FH ++MP  ++   L+  + +++   +     S        +Y+LKDE++ L K L + P  + FCHND+Q GNI++  E  S
Sbjct:   67 EELSVCPVSGGLSNLLFRCSLPNHVPSVGGEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYLPSRPLKTQELRDPVLSGAIATRMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQMNLVEMYSLKDEMNSLRKLLDDTPSPVVFCHNDIQEGNILLLSEPDS 256          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: CHKB_HUMAN (Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 5.635e-20
Identity = 57/201 (28.36%), Postives = 111/201 (55.22%), Query Frame = 2
Query:  182 DALQVIPLKGAMTNEVYQIAWPAKNNGLA---RNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKA-LLWDRLRKWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDPQEIGFCHNDLQYGNIMI--DQETSSITIIVSFTF 760
            + L+V P+ G ++N +++ + P     +    R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E++I +R L   ++R+P +S  +A KM +FH ++MP  ++   L+  + +++   +        +     +Y+LKDE+  L K L + P  + FCHND+Q GNI++  + E +   ++V F +
Sbjct:   67 EELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEY 267          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: CHKB_RAT (Choline/ethanolamine kinase OS=Rattus norvegicus GN=Chkb PE=1 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 2.141e-19
Identity = 57/190 (30.00%), Postives = 102/190 (53.68%), Query Frame = 2
Query:  182 DALQVIPLKGAMTNEVYQIAWP---AKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRK-ALLWDRLRKWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDPQEIGFCHNDLQYGNIMIDQETSS 733
            + L V P+ G ++N +++ + P       G  R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E+++ +R L   ++RDP +S  +A KM  FH ++MP  ++   L+  + +++   +     S        +Y+LKDE++ L   L   P  + FCHND+Q GNI++  E  S
Sbjct:   67 EELSVCPVSGGLSNLLFRCSLPNHVPSMGGEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYLPSRPLKTQELRDPVLSGAIATKMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQMNLVEMYSLKDEMNHLRTLLDATPSPVVFCHNDIQEGNILLLSEPDS 256          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: KICH_SCHPO (Putative choline kinase OS=Schizosaccharomyces pombe GN=SPAC13G7.12c PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.534e-17
Identity = 61/192 (31.77%), Postives = 98/192 (51.04%), Query Frame = 2
Query:  188 LQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKAL----LWDRLRKWVSVAKSFC-----SAKDAKEFCLYTLKDEISMLEK---ELPNDPQE-----IGFCHNDLQYGNIM 712
            L +  + GA+TN VY +A P   +  A  +L+RIYG  VE+F NR  E+   + ++    GP L+G F +GR E+++ + TL+   IRDPK+S  V  ++ E H+  +  P + L     W     W+  AK+       S     EF + TL+++ +       E   D ++     + F HND QYGN++
Sbjct:   63 LHIKRISGALTNAVYYVAPPEGYH--APKLLLRIYGPHVELFINRQVELENLKRLARHNIGPYLIGEFSNGRFEQYMESTTLTCKTIRDPKLSIYVGRRLCELHNFILLHPHEVLEMPAAWKNCLVWLPKAKAKILGRKHSLAITSEF-MKTLEEDFNAYYNWFVEWSRDKKDWFGLKMVFSHNDTQYGNLL 251          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: EKIA_DICDI (Probable ethanolamine kinase A OS=Dictyostelium discoideum GN=etnkA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.216e-14
Identity = 51/195 (26.15%), Postives = 91/195 (46.67%), Query Frame = 2
Query:  188 LQVIPLKGAMTNEVYQIAWPAKNNGLARN-----VLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRKWVSVAKSFCSAKDAKEFC----LYTLKDEISMLEKELPNDPQEIGFCHNDLQYGNIMIDQETSSITII 745
            L +  L G +TN +Y +    ++  + +      V++R+YG   E   +R +E+         G G +  G F +G +  FI    L+  DI  P +   +A ++ ++H ++MP  +   LW  ++KW ++A       +  E+     +  + +E  MLE+ L      I FCHNDL  GNI+ D   +  + I
Sbjct:   44 LTIQKLNGGITNVLYLV----EDKNIEQKYRYLPVVIRLYGYKSEEIIDRKNELIIQTEADQNGLGAKFYGLFDNGCIYGFIKGEPLAYEDISKPTMQTCIAKEIAQWHSIEMPTRKNPSLWPTIKKWAALAPDVYPVPEKNEYYQSINVKKMIEEGKMLEQRLAQLNSPIVFCHNDLLSGNIIYDPSQNCASFI 234          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: CHKA_MOUSE (Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.216e-14
Identity = 59/206 (28.64%), Postives = 96/206 (46.60%), Query Frame = 2
Query:  182 DALQVIPLKGAMTNEVYQIAWP---AKNNGLARNVLVRIYG----------EGVEVFFNRDD---------EIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP-GPRKALLWDRLRKWVSVAKSFCSAKDAK-----EFCLYTLKDEISMLEKELPNDPQEIGFCHNDLQYGNIMI 715
            D   +  ++G ++N ++Q + P   A      R VL+R+YG          EG E   N ++         E   F  ++ +  GP+L G F  GR+E+FI +R L   ++R P IS  +A KM  FH +KMP       L+  + K+++       +++A+     +   Y L  E+  L   L      + FCHND Q GNI++
Sbjct:  105 DQFHISVIRGGLSNMLFQCSLPDSIASVGDEPRKVLLRLYGAILKMRSCNKEGSEQAQNENEFQGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELRLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKILSYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILL 310          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: CHKA_RAT (Choline kinase alpha OS=Rattus norvegicus GN=Chka PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.074e-14
Identity = 59/206 (28.64%), Postives = 96/206 (46.60%), Query Frame = 2
Query:  182 DALQVIPLKGAMTNEVYQIAWP---AKNNGLARNVLVRIYG----------EGVEVFFNRDD---------EIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP-GPRKALLWDRLRKWVSVAKSFCSAKDAK-----EFCLYTLKDEISMLEKELPNDPQEIGFCHNDLQYGNIMI 715
            D   +  ++G ++N ++Q + P   A      R VL+R+YG          EG E   N ++         E   F  ++ +  GP+L G F  GR+E+FI +R L   ++  P IS  +A KM  FH +KMP       L+  + K+++       +++A+     +F  Y L  E+  L   L      + FCHND Q GNI++
Sbjct:  105 DQFHISVIRGGLSNMLFQCSLPDSIASVGDEPRKVLLRLYGAILKMRSCNKEGSEQAQNENEFQGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELCLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKFLSYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILL 310          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: KICH_YEAST (Choline kinase OS=Saccharomyces cerevisiae GN=CKI1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 61/214 (28.50%), Postives = 105/214 (49.07%), Query Frame = 2
Query:  131 KVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLARNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFI-HARTLSAADIRDPKISELVAAKMREFHD----LKMPGPRKALLWDRLRKWV-SVAKSFCSAKDAKE-----FCLYTLK--DEISMLEKELPNDPQEIG-------FCHNDLQYGNIM 712
            K +Q VA D          + ++ + GAMTN ++++ +P        ++L+RIYG  ++   +R+ E++    +S +  GP L G F +GR E+F+ +++TL+  DIR+ K S+ +A +M+E H     L       +  W ++ +W+ ++ K      D K       C    K  D +    K L +  Q I        FCHND QYGN++
Sbjct:  139 KKIQPVAQD----------MNLVKISGAMTNAIFKVEYPK-----LPSLLLRIYGPNIDNIIDREYELQILARLSLKNIGPSLYGCFVNGRFEQFLENSKTLTKDDIRNWKNSQRIARRMKELHVGVPLLSSERKNGSACWQKINQWLRTIEKVDQWVGDPKNIENSLLCENWSKFMDIVDRYHKWLISQEQGIEQVNKNLIFCHNDAQYGNLL 337          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: EKI2_HUMAN (Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.709e-14
Identity = 45/159 (28.30%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  275 VLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGP-RKALLWDRLRKWVSVAKSFCS-AKDAKEFCLYTLKDEISMLEKELPNDPQEIGFCHNDLQYGNIMIDQETSSITII 745
            VLVR+YGE  E+  +R++E+R F+ + +    P+L   F +G   E++    L    IR+P++  L+A +M + H +   G   K +LW ++  + ++ K+  + +  A    +  L+ E++ L++ L      + FCHNDL   NI+ D     +  I
Sbjct:  109 VLVRVYGERTELLVDRENEVRNFQLLRAHSCAPKLYCTFQNGLCYEYMQGVALEPEHIREPRLFRLIALEMAKIHTIHANGSLPKPILWHKMHNYFTLVKNEINPSLSADVPKVEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 267          
BLAST of DY271409 vs. ExPASy Swiss-Prot
Match: CHKA_HUMAN (Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 4.620e-14
Identity = 57/206 (27.67%), Postives = 94/206 (45.63%), Query Frame = 2
Query:  182 DALQVIPLKGAMTNEVYQIAWPAKNNGLA---RNVLVRIYG----------EGVEVFFNRDD---------EIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP-GPRKALLWDRLRKWVSVAKSFCSAKDAK-----EFCLYTLKDEISMLEKELPNDPQEIGFCHNDLQYGNIMI 715
            D   +  ++G ++N ++Q + P     L    R VL+R+YG          EG E     ++         E   F  ++ +  GP+L G F  GR+E+FI +R L   ++  P IS  +A KM  FH +KMP       L+  + K++         ++++     +   Y L  E+  L   L + P  + FCHND Q GNI++
Sbjct:  109 DEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILL 314          
The following BLAST results are available for this feature:
BLAST of DY271409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
CHKB_MOUSE4.314e-2030.00Choline/ethanolamine kinase OS=Mus musculus GN=Chk... [more]
CHKB_HUMAN5.635e-2028.36Choline/ethanolamine kinase OS=Homo sapiens GN=CHK... [more]
CHKB_RAT2.141e-1930.00Choline/ethanolamine kinase OS=Rattus norvegicus G... [more]
KICH_SCHPO1.534e-1731.77Putative choline kinase OS=Schizosaccharomyces pom... [more]
EKIA_DICDI1.216e-1426.15Probable ethanolamine kinase A OS=Dictyostelium di... [more]
CHKA_MOUSE1.216e-1428.64Choline kinase alpha OS=Mus musculus GN=Chka PE=1 ... [more]
CHKA_RAT2.074e-1428.64Choline kinase alpha OS=Rattus norvegicus GN=Chka ... [more]
KICH_YEAST2.709e-1428.50Choline kinase OS=Saccharomyces cerevisiae GN=CKI1... [more]
EKI2_HUMAN2.709e-1428.30Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=... [more]
CHKA_HUMAN4.620e-1427.67Choline kinase alpha OS=Homo sapiens GN=CHKA PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YO06FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271409 ID=DY271409; Name=DY271409; organism=Citrus clementina; type=EST; length=956bp
CAGTTTTTCTCTTCCTCTTAGGTAAAGTTTTCAATTTTTGTTGCAATCAC
CACTTTGTGCTGAGCTGACTACAAGAATGGCTATAAAGACAACTGAATTG
TTACCAAGTTCTTCTCCAGAAGAATTAAAGAAAGTTCTTCAGTCAGTAGC
TTCCGACTGGGGAGATGTTATCGATGATTCGGATGCATTGCAGGTGATTC
CATTAAAAGGTGCAATGACTAATGAGGTTTACCAAATAGCGTGGCCTGCA
AAAAATAATGGTCTTGCTAGAAACGTTTTGGTCCGGATTTATGGAGAAGG
CGTCGAGGTTTTCTTCAACAGGGATGATGAAATTAGAACCTTTGAGTGCA
TGTCCAGCCAAGGCCAGGGGCCTAGGCTTCTCGGGCGGTTCGGTGATGGA
AGAGTTGAGGAGTTCATTCATGCCAGGACACTGTCGGCTGCTGACATCCG
TGACCCCAAAATCTCTGAGTTGGTAGCAGCTAAGATGAGAGAATTTCATG
ATCTCAAAATGCCTGGTCCAAGGAAAGCACTACTATGGGACAGACTGAGG
AAATGGGTTAGTGTGGCCAAAAGTTTCTGTTCTGCTAAAGATGCAAAGGA
ATTCTGCTTGTATACTCTGAAGGATGAAATCAGTATGCTGGAGAAAGAGT
TGCCAAATGACCCTCAAGAGATTGGCTTTTGTCACAATGATCTTCAGTAT
GGAAACATTATGATTGACCAAGAGACCAGCTCAATTACTATAATTGTAAG
TTTTACTTTCCTACCGAACATGCTGAATTTAAAAAGAGCCTGCCCGAAAA
ACTTGTTATTCCTACCTTTTCCGTCCATTCCCCAAGGGATGCCGGCGGTG
GTTGAAAAACTTTGGTTTCAGCTTTAAAAATCCAATTCCAAAACCAACCA
AAAAAGCCGTCCCAAACAAATATGCCCCCAACCATTTCGGGGCTGCCCTT
TCCGGC
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