DY271410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_ARATH (Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 2.733e-68 Identity = 111/154 (72.08%), Postives = 135/154 (87.66%), Query Frame = 2 Query: 206 EYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKR 667 +YK PLVWIDLEMTGL +EVDRILEIACIIT+G LT+SVEGPDLV+ QTK+CLD M +WCQ HH ASGLT+KVL SA+TEREAE++V+EFVKK+VG+ PLLAGNSVYVDF+FLKKYMP+LA+LF H+LVDVSS+KALC W+P + ++ K+ Sbjct: 41 DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLFLKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKK 194 HSP 2 Score: 43.1282 bits (100), Expect = 2.733e-68 Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 3 Query: 648 RKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 RK P+K+ HRA++DI+ESI ELKY ++ IFK Sbjct: 188 RKAPAKKNNHRAMDDIRESIKELKYYKKTIFK 219
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_BOVIN (Oligoribonuclease, mitochondrial OS=Bos taurus GN=REXO2 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.675e-39 Identity = 68/143 (47.55%), Postives = 94/143 (65.73%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQ 649 +VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH SGLT+ V S +T ++AE + + FV++ LAGNSV+ D FL KYMP + ++DVS++K LC WYP + + Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYE 185 HSP 2 Score: 38.891 bits (89), Expect = 3.675e-39 Identity = 19/35 (54.29%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 639 EIYRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 E Y P K HRAL+DI ESI EL++ + NIFK Sbjct: 182 EEYEFAPKKAASHRALDDISESIKELQFYRNNIFK 216
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_HUMAN (Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 4.788e-39 Identity = 68/143 (47.55%), Postives = 94/143 (65.73%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQ 649 +VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH SGLT+ V S +T ++AE + + FV++ LAGNSV+ D FL KYMP + ++DVS++K LC WYP + + Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYE 185 HSP 2 Score: 39.2762 bits (90), Expect = 4.788e-39 Identity = 19/38 (50.00%), Postives = 24/38 (63.16%), Query Frame = 3 Query: 639 EIYRKFPSKEQKHRALNDIKESIMELKY*QENIFKTNL 752 E Y P K HRAL+DI ESI EL++ + NIFK + Sbjct: 182 EEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKI 219
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_RAT (Oligoribonuclease, mitochondrial OS=Rattus norvegicus GN=Rexo2 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.238e-39 Identity = 68/143 (47.55%), Postives = 94/143 (65.73%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQ 649 +VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH SGLT+ V S +T ++AE + + FV++ LAGNSV+ D FL K+MP + ++DVS++K LC WYP D + Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHLHYRIIDVSTVKELCRRWYPEDYE 185 HSP 2 Score: 38.891 bits (89), Expect = 6.238e-39 Identity = 19/35 (54.29%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 639 EIYRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 E Y P K HRAL+DI ESI EL++ + NIFK Sbjct: 182 EDYEFAPKKAASHRALDDISESIKELQFYRNNIFK 216
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_MOUSE (Oligoribonuclease, mitochondrial OS=Mus musculus GN=Rexo2 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 6.238e-39 Identity = 68/143 (47.55%), Postives = 94/143 (65.73%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQ 649 +VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH SGLT+ V S +T ++AE + + FV++ LAGNSV+ D FL K+MP + ++DVS++K LC WYP D + Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHLHYRIIDVSTVKELCRRWYPEDYE 185 HSP 2 Score: 38.891 bits (89), Expect = 6.238e-39 Identity = 19/35 (54.29%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 639 EIYRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 E Y P K HRAL+DI ESI EL++ + NIFK Sbjct: 182 EDYEFAPKKAASHRALDDISESIKELQFYRNNIFK 216
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_PASMU (Oligoribonuclease OS=Pasteurella multocida GN=orn PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 6.566e-35 Identity = 75/153 (49.02%), Postives = 95/153 (62.09%), Query Frame = 2 Query: 212 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRT 670 K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ+ ECL M +WC H +GL E+V +S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA F + +DVS++K L W P L+ + K T Sbjct: 5 KQNLIWIDLEMTGLDPESERIIEIATIVTDKHLNILAEGPVLAIHQSDECLAKMNDWCMKTHTENGLVERVKNSRLTERAAELQTLDFLKKWVPKGVSPICGNSVSQDKRFLFKYMPELADYFHYRHLDVSTLKELASRWKPDVLKGFTKKNT 157 HSP 2 Score: 29.6462 bits (65), Expect = 6.566e-35 Identity = 16/32 (50.00%), Postives = 22/32 (68.75%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIFKTNLK 755 +K+ H AL+DI+ESI EL Y +E+ NLK Sbjct: 153 TKKNTHLALDDIRESIAELAYYREHFI--NLK 182
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_CAEEL (Probable oligoribonuclease OS=Caenorhabditis elegans GN=C08B6.8 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.459e-34 Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 ++WID EMTGL +E + EIA I+TD +L GPD+VIHQ KE LD+M EW +N +GL EK++ S + +AE +V++F+K + +AGNS+Y+D +F+KKYMP L + +DVS+IK L WYP Sbjct: 15 IIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRNTFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLDKFAHYRCIDVSTIKGLVQRWYP 153 HSP 2 Score: 34.6538 bits (78), Expect = 2.459e-34 Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 651 KFPSKEQKHRALNDIKESIMELKY*QENIF 740 K P K+ HRA +DI ESI ELK +E+IF Sbjct: 156 KHPKKQCTHRAFDDIMESIAELKNYRESIF 185
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_DROME (Probable oligoribonuclease OS=Drosophila melanogaster GN=CG10214 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.421e-34 Identity = 64/139 (46.04%), Postives = 87/139 (62.59%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 +VW+DLEMTGL IE D+ILE+ACIITD L EGP I+ +E DSM EWC HH SGL ++ S + EA V+ +++KN+ L GNSVY D +F+ K+MP + + + +VDVS+IK L W+P Sbjct: 38 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHHYNSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFMPLVDAYLHYRIVDVSTIKELAKRWHP 176 HSP 2 Score: 36.1946 bits (82), Expect = 5.421e-34 Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 3 Query: 627 PGILEIYRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 P IL+ P K HR+L+DI+ESI EL Y + N+FK Sbjct: 176 PAILD---SAPKKSFTHRSLDDIRESIKELAYYKANLFK 211
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_VIBPA (Oligoribonuclease OS=Vibrio parahaemolyticus GN=orn PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 9.234e-34 Identity = 66/150 (44.00%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 221 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYPRDLQEISFKRT 670 L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H ASGL E+V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F + +DVS++K L W P L S + T Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHTASGLVERVRNSKISEQDAVAQTIEFLEKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYFHYRYLDVSTLKELTRRWKPEVLDGFSKQGT 157 HSP 2 Score: 37.3502 bits (85), Expect = 9.234e-34 Identity = 18/28 (64.29%), Postives = 22/28 (78.57%), Query Frame = 3 Query: 660 SKEQKHRALNDIKESIMELKY*QENIFK 743 SK+ H AL+DI+ESI ELKY +E IFK Sbjct: 153 SKQGTHLALDDIRESIAELKYYRETIFK 180
BLAST of DY271410 vs. ExPASy Swiss-Prot
Match: ORN_DICDI (Probable oligoribonuclease OS=Dictyostelium discoideum GN=rexo2-1 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.201e-33 Identity = 70/148 (47.30%), Postives = 95/148 (64.19%), Query Frame = 2 Query: 194 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTEKVLHSALTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMPWYP 637 P+ E +VW+DLEMTGL I D ILE+A +ITD +L +GP+LVIH++ E L +M +WC HH SGLTE V +S ++ EAEK ++EFV+K+ LAGN+V+ D FL K MP A + ++DVS+IK L WYP Sbjct: 10 PVINERSKRMVWVDLEMTGLDISKDVILEMAIVITDAELNVIEKGPNLVIHRSDEVLKNMNDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGNTVHEDRRFLLKEMPTFAEHLHYRIIDVSTIKELSRRWYP 157 HSP 2 Score: 31.5722 bits (70), Expect = 1.201e-33 Identity = 17/33 (51.52%), Postives = 20/33 (60.61%), Query Frame = 3 Query: 645 YRKFPSKEQKHRALNDIKESIMELKY*QENIFK 743 Y P K HRAL DI+ESI ELK + +FK Sbjct: 158 YIPSPKKVCGHRALQDIEESIEELKSYRVTVFK 190 The following BLAST results are available for this feature:
BLAST of DY271410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271410 ID=DY271410; Name=DY271410; organism=Citrus clementina; type=EST; length=933bpback to top |