DY302830

Overview
NameDY302830
Unique NameDY302830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length954
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_HUMAN (Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo sapiens GN=ACSS2 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.658e-62
Identity = 117/214 (54.67%), Postives = 149/214 (69.63%), Query Frame = 3
Query:  231 PSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNI-EAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESAQSGISV 869
            P  + SR A VPS Q+Y E+++RSVE+P  FW DIA EFYWK          N DV KG + IEW KG  TNICYN LDRN+ E  LGDKVA YWE N+PG    +TY QLL QVCQ +N L+  G++KGD V IY+PM+ EL +AMLACARIGA+HS+VFAGFSS+SL +RI+D    ++IT++A  RG K ++LK++ D AL +  + G  V
Sbjct:   31 PPPEVSRSAHVPSLQRYRELHRRSVEEPREFWGDIAKEFYWKTPCPGPFLRYNFDVTKGKIFIEWMKGATTNICYNVLDRNVHEKKLGDKVAFYWEGNEPGETTQITYHQLLVQVCQFSNVLRKQGIQKGDRVAIYMPMIPELVVAMLACARIGALHSIVFAGFSSESLCERILDSSCSLLITTDAFYRGEKLVNLKELADEALQKCQEKGFPV 244          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_MOUSE (Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus GN=Acss2 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 9.453e-60
Identity = 110/214 (51.40%), Postives = 149/214 (69.63%), Query Frame = 3
Query:  231 PSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNI-EAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESAQSGISV 869
            P  +  R A VPS Q+Y E+++RSVE+P  FW +IA EFYWK          N DV KG +  EW KG  TNICYN LDRN+ E  LGDKVA YWE N+PG    +TY +LL QVCQ +N L+  G++KGD V IY+PM++EL +AMLACAR+GA+HS+VFAGFS++SL +RI+D    ++IT++A  RG K ++LK++ D +L++  + G  V
Sbjct:   31 PPPEVRRSAHVPSLQRYRELHRRSVEEPREFWGNIAKEFYWKTACPGPFLQYNFDVTKGKIFTEWMKGATTNICYNVLDRNVHEKKLGDKVAFYWEGNEPGETTKITYRELLVQVCQFSNVLRKQGIQKGDRVAIYMPMILELVVAMLACARLGALHSIVFAGFSAESLCERILDSSCCLLITTDAFYRGEKLVNLKELADESLEKCREKGFPV 244          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_DROME (Acetyl-coenzyme A synthetase OS=Drosophila melanogaster GN=AcCoAS PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 8.003e-59
Identity = 108/222 (48.65%), Postives = 156/222 (70.27%), Query Frame = 3
Query:  213 ENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQ-RVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPG-VDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESAQSGISVD 872
            E  I  P+   S+ A + S ++Y + Y+ S+++PA FW+ +A +F+W+    Q +    N ++ KG + I+W +G  TN+CYN LDRN+  GLGD++A YWE N P      LTY +LL++VC+ AN LKD G++KGD V IY+PM++ELPIAMLACARIGAVHS+VFAGFS DSLA+R+ DCK K++IT++   RG K ++LK + D AL++  + G SV+
Sbjct:    4 EKSIYDPNPAISQNAYISSFEEYQKFYQESLDNPAEFWSRVAKQFHWETPADQDKFLKYNFNISKGPISIKWMEGASTNLCYNLLDRNVRNGLGDQIAYYWEGNHPDDYSRGLTYRKLLEEVCRFANVLKDHGIRKGDRVSIYMPMILELPIAMLACARIGAVHSIVFAGFSPDSLAERMFDCKAKLLITADGAWRGEKPLYLKALCDTALEKVEEMGHSVE 225          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_LEPBL (Acetyl-coenzyme A synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=acsA PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 7.363e-50
Identity = 100/211 (47.39%), Postives = 140/211 (66.35%), Query Frame = 3
Query:  222 IVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESAQ 854
            IVLPS +F + + + + + Y  +YK S+E+P  FWA  A+   W +KW + +   N D +  N K+EWFKGG  N+ YNCLDR+I   L +K A+ WE ++P     LTY  + ++V + AN LK  GVKKGD V++YLPM+ EL I +LAC RIGA+HSVVF GFS ++L  RI DCKPK+++T++   RG K I LK  VD AL++S +
Sbjct:    6 IVLPSAEFKKNSNI-TLKDYKSLYKESIENPNKFWAKEANRLTWFKKWTKVL---NHDFK--NAKVEWFKGGKLNVSYNCLDRHISTPLKNKAALIWEGDNPSESKVLTYYDVYREVNRFANVLKKYGVKKGDRVLVYLPMIPELAITILACTRIGAIHSVVFGGFSPEALQSRIDDCKPKLIVTADGGFRGGKPIELKRNVDIALEKSKE 210          

HSP 2 Score: 23.0978 bits (48), Expect = 7.363e-50
Identity = 7/14 (50.00%), Postives = 8/14 (57.14%), Query Frame = 1
Query:  907 NRENTKWQDGRDLW 948
            N     W+DGRD W
Sbjct:  223 NESGLVWKDGRDYW 236          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_LEPBJ (Acetyl-coenzyme A synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=acsA PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 7.363e-50
Identity = 100/211 (47.39%), Postives = 140/211 (66.35%), Query Frame = 3
Query:  222 IVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESAQ 854
            IVLPS +F + + + + + Y  +YK S+E+P  FWA  A+   W +KW + +   N D +  N K+EWFKGG  N+ YNCLDR+I   L +K A+ WE ++P     LTY  + ++V + AN LK  GVKKGD V++YLPM+ EL I +LAC RIGA+HSVVF GFS ++L  RI DCKPK+++T++   RG K I LK  VD AL++S +
Sbjct:    6 IVLPSAEFKKNSNI-TLKDYKSLYKESIENPNKFWAKEANRLTWFKKWTKVL---NHDFK--NAKVEWFKGGKLNVSYNCLDRHISTPLKNKAALIWEGDNPSESKVLTYYDVYREVNRFANVLKKYGVKKGDRVLVYLPMIPELAITILACTRIGAIHSVVFGGFSPEALQSRIDDCKPKLIVTADGGFRGGKPIELKRNVDIALEKSKE 210          

HSP 2 Score: 23.0978 bits (48), Expect = 7.363e-50
Identity = 7/14 (50.00%), Postives = 8/14 (57.14%), Query Frame = 1
Query:  907 NRENTKWQDGRDLW 948
            N     W+DGRD W
Sbjct:  223 NESGLVWKDGRDYW 236          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_LEPIN (Acetyl-coenzyme A synthetase OS=Leptospira interrogans GN=acsA PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.597e-50
Identity = 101/211 (47.87%), Postives = 138/211 (65.40%), Query Frame = 3
Query:  222 IVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESAQ 854
            +V PS +F + A + S + Y  +YK S+E+P  FWA  A+   W +KW  +V S +      N K+EWFKGG  N+ YNCLDR+I   L +K A+ WE ++P     LTY  + ++V + AN LK  GVKKGD V++YLPM+ EL I +LAC RIGA+HSVVF GFS ++L  RI DCKPK+V+T++   RG K I LK  VD AL++S +
Sbjct:   13 VVSPSAEFKKNANI-SLKNYKSLYKESIENPNKFWAREANRLIWFKKW-TKVLSHDFK----NAKVEWFKGGKLNVSYNCLDRHISTPLKNKAALIWEGDNPTESRVLTYYDVYREVNRFANILKKFGVKKGDRVLVYLPMIPELAITILACTRIGAIHSVVFGGFSPEALQSRIDDCKPKLVVTADGGFRGGKPIELKKNVDLALEKSKE 217          

HSP 2 Score: 21.9422 bits (45), Expect = 9.597e-50
Identity = 6/14 (42.86%), Postives = 8/14 (57.14%), Query Frame = 1
Query:  907 NRENTKWQDGRDLW 948
            N     W+DG+D W
Sbjct:  230 NESGLTWKDGQDYW 243          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_LEPIC (Acetyl-coenzyme A synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=acsA PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.597e-50
Identity = 101/211 (47.87%), Postives = 138/211 (65.40%), Query Frame = 3
Query:  222 IVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESAQ 854
            +V PS +F + A + S + Y  +YK S+E+P  FWA  A+   W +KW  +V S +      N K+EWFKGG  N+ YNCLDR+I   L +K A+ WE ++P     LTY  + ++V + AN LK  GVKKGD V++YLPM+ EL I +LAC RIGA+HSVVF GFS ++L  RI DCKPK+V+T++   RG K I LK  VD AL++S +
Sbjct:   13 VVSPSAEFKKNANI-SLKNYKSLYKESIENPNKFWAREANRLIWFKKW-TKVLSHDFK----NAKVEWFKGGKLNVSYNCLDRHISTPLKNKAALIWEGDNPTESRVLTYYDVYREVNRFANILKKFGVKKGDRVLVYLPMIPELAITILACTRIGAIHSVVFGGFSPEALQSRIDDCKPKLVVTADGGFRGGKPIELKKNVDLALEKSKE 217          

HSP 2 Score: 21.9422 bits (45), Expect = 9.597e-50
Identity = 6/14 (42.86%), Postives = 8/14 (57.14%), Query Frame = 1
Query:  907 NRENTKWQDGRDLW 948
            N     W+DG+D W
Sbjct:  230 NESGLTWKDGQDYW 243          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_SYNFM (Acetyl-coenzyme A synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=acsA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.673e-48
Identity = 100/189 (52.91%), Postives = 131/189 (69.31%), Query Frame = 3
Query:  273 QKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAAL 839
            + YL+MY++SV+DP GFW + A    W + W  +V S + +   G+V+ +WF+ G  N+ YNCLDRN+ A  GD+VAI WE +DP V   +TY +L  QVC+ AN LK  G+KKGD   IYLPM+ EL +AMLACARIG VHS+VFAGFS +SLA RI+DC  KVVIT++   RG K I LK+  + AL
Sbjct:   21 ETYLKMYEQSVKDPEGFWGEHAKRIDWFQPW-TKVKSGSFE---GDVRFKWFENGKLNVAYNCLDRNL-AKRGDQVAIIWEGDDPKVSKYITYRELHDQVCRFANVLKAQGLKKGDRATIYLPMIPELAVAMLACARIGVVHSIVFAGFSPESLAGRILDCGGKVVITADEGLRGGKPIPLKENTEEAL 204          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_RHOP5 (Acetyl-coenzyme A synthetase OS=Rhodopseudomonas palustris (strain BisA53) GN=acsA PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.184e-48
Identity = 102/204 (50.00%), Postives = 134/204 (65.69%), Query Frame = 3
Query:  240 DFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESA 851
            +++++A V    KY EMY RSV DP GFW D A    W + +      EN     GNV I+WF+ G+ N+  NC+DR+++    D+VAI WE +DP     +TY QL  +VC++AN L++  V+KGD V IYLPM+ E   AMLACARIGA+HSVVF GFS DSLAQRI DC  KVVIT++   RG + + LK  VDAAL +S+
Sbjct:   11 EWAKRAFVDDA-KYQEMYARSVNDPNGFWKDEAQRVDWIKPFS---VVENTSFAPGNVSIKWFEDGVLNVAANCIDRHLK-DRADQVAIIWEGDDPSESRKITYRQLHDEVCKMANVLRNRNVQKGDRVTIYLPMIPEAAFAMLACARIGAIHSVVFGGFSPDSLAQRITDCASKVVITADEGLRGGRTVPLKANVDAALRKSS 209          
BLAST of DY302830 vs. ExPASy Swiss-Prot
Match: ACSA_BRUSU (Acetyl-coenzyme A synthetase OS=Brucella suis GN=acsA PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.356e-48
Identity = 98/200 (49.00%), Postives = 137/200 (68.50%), Query Frame = 3
Query:  273 QKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDGTLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDESAQSGISVD 872
            + YLE Y+ SV DP GFWA       W + + +    +N D   G+V I+W++ G+TN+ YNC+DR++++  GDKVAI WE ++P +D  +TY +L + VC++AN LK  GVKKGD V IYLPM+ E   AMLACARIGAVHSVVFAGFS ++LA RI+DC+   VIT++   RG K + LK+  D A+D +A+  + V+
Sbjct:   21 ETYLEWYEESVSDPDGFWAKHGRRIDWFKPFTK---VKNTDFN-GDVTIKWYEDGVTNVSYNCIDRHLKSR-GDKVAIIWEGDNPYIDKKITYRELYENVCRMANVLKKHGVKKGDRVTIYLPMIPEAAYAMLACARIGAVHSVVFAGFSPEALAGRIVDCESTFVITADEGVRGGKPVALKENTDTAIDIAAKQYVMVN 215          
The following BLAST results are available for this feature:
BLAST of DY302830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
ACSA_HUMAN2.658e-6254.67Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo ... [more]
ACSA_MOUSE9.453e-6051.40Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus m... [more]
ACSA_DROME8.003e-5948.65Acetyl-coenzyme A synthetase OS=Drosophila melanog... [more]
ACSA_LEPBL7.363e-5047.39Acetyl-coenzyme A synthetase OS=Leptospira borgpet... [more]
ACSA_LEPBJ7.363e-5047.39Acetyl-coenzyme A synthetase OS=Leptospira borgpet... [more]
ACSA_LEPIN9.597e-5047.87Acetyl-coenzyme A synthetase OS=Leptospira interro... [more]
ACSA_LEPIC9.597e-5047.87Acetyl-coenzyme A synthetase OS=Leptospira interro... [more]
ACSA_SYNFM1.673e-4852.91Acetyl-coenzyme A synthetase OS=Syntrophobacter fu... [more]
ACSA_RHOP52.184e-4850.00Acetyl-coenzyme A synthetase OS=Rhodopseudomonas p... [more]
ACSA_BRUSU6.356e-4849.00Acetyl-coenzyme A synthetase OS=Brucella suis GN=a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ4YB04RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY302830 ID=DY302830; Name=DY302830; organism=Citrus clementina; type=EST; length=954bp
CAAAACCGTTGAAATTAATCAGACAGTCGGGCGGCGGCGGCGCTGTGGTG
ATGGCATCATCTGGCTGCAACAACAATAACGGAAGCAATAGCAAGAAGAT
GAAAACAGAGAGTTTCTTGAGGCATGTGGAGTCTTTGGCGAGTTTCCCAT
CTGGGGCTGGTAAGATCTCTCGGTTCAGCGCTGTCATATTGGGGGAAGCT
CTCTCTTCTGAGGAAAATGATATTGTTTTACCCAGTGATGATTTCTCTCG
CCAGGCTTTGGTCCCTTCGCCCCAAAAGTATTTGGAAATGTACAAAAGGT
CTGTTGAGGACCCTGCTGGATTTTGGGCCGATATAGCTTCGGAGTTTTAT
TGGAAGGAGAAATGGGGTCAGCGAGTTTGCTCTGAGAATCTTGATGTTAG
GAAAGGCAATGTCAAGATTGAGTGGTTCAAGGGTGGTATCACCAACATTT
GCTACAATTGCTTGGACAGAAACATTGAAGCAGGATTGGGTGACAAAGTT
GCCATTTACTGGGAAGCCAATGATCCGGGTGTTGATGGTACTCTTACATA
CTCCCAGCTGCTTCAACAAGTTTGCCAGCTTGCAAATTACTTGAAAGATA
TTGGTGTTAAAAAGGGTGATGCTGTTATAATTTACTTGCCCATGCTTATG
GAACTCCCCATTGCTATGCTTGCGTGTGCTCGAATTGGTGCAGTTCATTC
GGTTGTCTTTGCTGGATTTTCTTCAGATTCTCTTGCACAGAGAATCATGG
ACTGCAAGCCAAAAGTTGTAATTACTAGTAATGCTGTTAAGAGAGGTCCT
AAGGCCATCCACCTCAAGGACATAGTTGATGCTGCACTTGACGAATCTGC
CCAAAGTGGGATCTCTGTAGATGTATGGCTTACCCTATGAAAACCATTCG
GCCATGAACAGGGAAAACACAAAATGGCAAGACGGAAGGGACTTATGGGT
GGCA
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