DY302856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY302856 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.131e-38 Identity = 86/241 (35.68%), Postives = 136/241 (56.43%), Query Frame = 3 Query: 186 GSRPDTFYTSEAVRSISSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSESPESSQHQIVQLPDFPGGVDAFELCAKFCYGITITLSAYNIVAARCAAEYLQMTEDVEKGNLIYKIEVFFNSCILHGWRDSIVTLQSTKAFPLWSEDLGITSRCIEAIASKVLTHPSKVSLSHS-----------------YSRRGRDDISCNGAESPRHKASTKGWWAEDMAELGIDLY*RTMIAIK 857 G + D F +++++ SDL++++ + LHK+PLLS+ ++ RL ES + I+ L D PGG +AFEL +KFCYG+ + L+A NI RCAAEYL+MTED+E+GNLI+K E F + +L WRDSI+ L+S + W+E+L I RC E+IA K ++P + +++ ++ C+ + + + WW ED++ L ID + R + AIK Sbjct: 32 GVKTDGFELRGQSWFVATDIPSDLLVKIGDMNFHLHKYPLLSRSGKMNRLIYESRDPDP-TILILDDLPGGPEAFELASKFCYGVPVDLTATNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIVRRCSESIAWKACSNPKGIRWAYTGKAPSPSTTNFAGSSPRWNESKDSSFYCSPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAIK 271
BLAST of DY302856 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.169e-36 Identity = 89/257 (34.63%), Postives = 135/257 (52.53%), Query Frame = 3 Query: 198 DTFYTSEAVRSISSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSESPESSQHQ--------IVQLPDFPGGVDAFELCAKFCYGITITLSAYNIVAARCAAEYLQMTEDVEKGNLIYKIEVFFNSCILHGWRDSIVTLQSTKAFPLWSEDLGITSRCIEAIASKVLTHPSKVSLSHSYSRRG-----------RDDISCNGAESPRHKASTKG------------------WWAEDMAELGIDLY*RTMIAIK 857 D F + ++S++ SDL+++V + LHK+P++S+ R+ R ES + + + +V++ D PGG +FEL A+F YG+ + L+A NI RCAAEYL+MTE++E+GNLI+K E F + +L WRDSI L+S +A W+E+L I RC E+IA K +P V +++ + G R G SPR G WW ED++ L ID + R + AIK Sbjct: 34 DGFVRRDRSWYVNSDIPSDLLVKVGDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAAAVAVVEMGDLPGGAGSFELAARFSYGMAVDLTAANISGLRCAAEYLEMTEEMEEGNLIFKTEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQIVRRCSESIAWKACANPRGVRWAYTGAGAGSGGARGGPAAIRGGGGSGGTASPRWNVGGGGGGESKESSPSRQAVPPADWWFEDVSVLRIDHFVRVVTAIK 290
BLAST of DY302856 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 3.403e-36 Identity = 86/237 (36.29%), Postives = 134/237 (56.54%), Query Frame = 3 Query: 168 MKFMKLGSRPDTFYTSEAVRSISSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSE-SPESSQHQIVQLPDFPGGVDAFELCAKFCYGITITLSAYNIVAARCAAEYLQMTEDVEKGNLIYKIEVFFNSCILHGWRDSIVTLQSTKAFPLWSEDLGITSRCIEAIASKVLTHPSKVS---LSHSYSRRG-RDDISCNG-AESPRHKASTKGWWAEDMAELGIDLY*RTMIAIKS 860 M MKLGS+ D F ++ + SD++++V + LHKFPLLS+ ++R +E S E ++++ D PGG FEL AKFCYG+ + L+A N+V RCAAE+L+MTE+ +GNLI + E FFN +L W+DSI L S ++++L IT +CIE++A + T P+ + H + + NG + R K ++ WW ED + L L+ R + ++S Sbjct: 1 MACMKLGSKSDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVMERRIAEASKEGDDKCLIEISDLPGGDKTFELVAKFCYGVKLELTASNVVYLRCAAEHLEMTEEHGEGNLISQTETFFNQVVLKSWKDSIKALHSCDEVLEYADELNITKKCIESLAMRASTDPNLFGWPVVEHGGPMQSPGGSVLWNGISTGARPKHTSSDWWYEDASMLSFPLFKRLITVMES 237
BLAST of DY302856 vs. ExPASy Swiss-Prot
Match: Y5880_ARATH (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana GN=At5g48800 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.136e-30 Identity = 78/219 (35.62%), Postives = 117/219 (53.42%), Query Frame = 3 Query: 231 ISSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSESPESSQHQIVQLPDFPGGVDAFELCAKFCYGITITLSAYNIVAARCAAEYLQMTEDVEKGNLIYKIEVFFNSCILHGWRDSIVTLQSTKAFPLWSEDLGITSRCIEAIASKVLTHPSKVSLSH-SYSRRGRDDISCNGAESPRHKASTKGWWAEDMAELGIDLY*RTMIAIKSGWKDPPQI 884 I +V SD+ I+V G + LHKFPL+S+ R++R+ +E +S + V+L + PGG + FEL AKFCYGI +++ N+ C ++YL+MTE+ K NL + E + S + + L+ ++ +++L I RCI+AIASK S S YS GR +S + WW ED++ L IDLY R M A+K P I Sbjct: 37 IFRDVPSDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISK-VELLNLPGGAETFELAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIVCKNLEMCVQVLKQSEILLPLADELNIIGRCIDAIASKACAEQIASSFSRLEYSSSGRLHMS----RQVKSSGDGGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPESI 250
BLAST of DY302856 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 1.135e-23 Identity = 65/220 (29.55%), Postives = 107/220 (48.64%), Query Frame = 3 Query: 234 SSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSESPESSQHQIVQLPDFPGGVDAFELCAKFCYGITITLSAYNIVAARCAAEYLQMTEDVEKGNLIYKIEVFFNSCILHGWRDSIVTLQSTKAFPLWSEDLGITSRCIEAIASKVLTHPSKVSLSHSYSRRGRDDISCNGAESPRHKASTKGWWAEDMAELGIDLY*RTMIAIKSGWKDPPQILKA 893 S ++ +D++++V + LHKF L++K +++L ES +S +I L D PGG + FE AKFCYG+ ++ N+ A CAAE+LQMT+ NL + + F + L +IV L+S + S DLGI RC++ + +K +CN A P + WW E++ L +D + + ++K P + A Sbjct: 27 SQDIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIMESKDSDVTRI-NLSDIPGGPEIFEKAAKFCYGVNFEITVQNVAALHCAAEFLQMTDKYCDNNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVDVVGAK----------------------ACNEAMFPCR--TPPNWWTEELCILDVDFFSDVVSSMKQRGVKPSSLASA 221 The following BLAST results are available for this feature:
BLAST of DY302856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY302856 ID=DY302856; Name=DY302856; organism=Citrus clementina; type=EST; length=977bpback to top |