DY303080

Overview
NameDY303080
Unique NameDY303080
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length966
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_DESHY (5'-nucleotidase surE OS=Desulfitobacterium hafniense (strain Y51) GN=surE PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.322e-24
Identity = 59/129 (45.74%), Postives = 83/129 (64.34%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISL 669
            +L+TN DG  +PGL  L   L   G Y+V + AP S KS +GHS+TL E + ++   ++  T Y VSG P DCV LA+ G++    KP LVISGIN G + G  +FYSG V+ A E ++ GVP++++SL
Sbjct:    3 ILLTNDDGYFAPGLQTLYTTLAEAG-YDVFIVAPDSQKSATGHSITLFEPLFITKHSLDRGTGYAVSGKPADCVKLAIQGSII--PKPDLVISGINNGPNLGTDVFYSGTVSAAMEGVLLGVPAIAVSL 128          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_DESHD (5'-nucleotidase surE OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=surE PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.322e-24
Identity = 59/129 (45.74%), Postives = 83/129 (64.34%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISL 669
            +L+TN DG  +PGL  L   L   G Y+V + AP S KS +GHS+TL E + ++   ++  T Y VSG P DCV LA+ G++    KP LVISGIN G + G  +FYSG V+ A E ++ GVP++++SL
Sbjct:    3 ILLTNDDGYFAPGLQTLYTTLAEAG-YDVFIVAPDSQKSATGHSITLFEPLFITKHSLDRGTGYAVSGKPADCVKLAIQGSII--PKPDLVISGINNGPNLGTDVFYSGTVSAAMEGVLLGVPAIAVSL 128          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_CAMJR (5'-nucleotidase surE OS=Campylobacter jejuni (strain RM1221) GN=surE PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23
Identity = 63/153 (41.18%), Postives = 95/153 (62.09%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS-GTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLI 738
            +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G   Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G  + YSG  AGA EA++ G+P++++S  +KK E +E D+K+A+ +   +I
Sbjct:    4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---GKRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVGEDITYSGTCAGAMEAVLQGIPAIALSQFYKKSE-KELDYKNALQITKKII 151          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_CAMJJ (5'-nucleotidase surE OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=surE PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23
Identity = 63/153 (41.18%), Postives = 95/153 (62.09%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS-GTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLI 738
            +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G   Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G  + YSG  AGA EA++ G+P++++S  +KK E +E D+K+A+ +   +I
Sbjct:    4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---GKRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVGEDITYSGTCAGAMEAVLQGIPAIALSQFYKKSE-KELDYKNALQITKKII 151          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_CAMJE (5'-nucleotidase surE OS=Campylobacter jejuni GN=surE PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23
Identity = 63/153 (41.18%), Postives = 95/153 (62.09%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS-GTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLI 738
            +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G   Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G  + YSG  AGA EA++ G+P++++S  +KK E +E D+K+A+ +   +I
Sbjct:    4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---GKRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVGEDITYSGTCAGAMEAVLQGIPAIALSQFYKKSE-KELDYKNALQITKKII 151          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_CAMJ8 (5'-nucleotidase surE OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=surE PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23
Identity = 63/153 (41.18%), Postives = 95/153 (62.09%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEINGATAYEVS-GTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLI 738
            +L+TN DG ES GL  L++ L +E    + + AP S+KS   HS+TL + +        G   Y++  GTP DCV LAL  AL+    P LVISGIN+G++ G  + YSG  AGA EA++ G+P++++S  +KK E +E D+K+A+ +   +I
Sbjct:    4 ILITNDDGYESEGLKKLIKMLTKEFKAKITIVAPASEKSACSHSITLTKPLRFVKV---GKRFYKLDDGTPADCVYLALH-ALYKKRLPDLVISGINKGANVGEDITYSGTCAGAMEAVLQGIPAIALSQFYKKSE-KELDYKNALQITKKII 151          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE2_CHLCV (5'-nucleotidase surE 2 OS=Chlamydophila caviae GN=surE2 PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 9.473e-23
Identity = 57/143 (39.86%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAE--INGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDF 705
            +L+TN DGI +PG+  LV  L++    ++++ AP++++S    ++T  E + +   +  +  A A+ VSGTPVDCV +AL+  LF    P LV+SGINRGS+ G H+FYSG +  A E+ +CGVP++++S        QE +F
Sbjct:   14 ILLTNDDGIFAPGMTLLVSNLLKADFADLYIVAPKTEQSAKSMAMTFHEPVILQPYDYPLPVAGAWSVSGTPVDCVRIALA-YLFKDELPDLVLSGINRGSNAGRHVFYSGTLGAAIESTLCGVPAVALSQEGNFSFFQEKNF 155          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_DESAA (5'-nucleotidase surE OS=Desulfatibacillum alkenivorans (strain AK-01) GN=surE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.047e-21
Identity = 65/169 (38.46%), Postives = 96/169 (56.80%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETI-AVSSAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLI-NAATRDIGKGIFQGV 783
            +LVTN DGI  PGL  L + L R+  + V V AP  ++S   H++TL   + A S    NG  ++ V+GTP DCV L +   L    KP LV+SGIN G + G ++ YSG V+ AREA + G+P++++S++        + F DA      L+ + A R + KG+F  V
Sbjct:    3 ILVTNDDGIHHPGLAALRDGLARD--HRVQVVAPDRERSAIAHAITLLTPLRAFSQTNGNGIPSWAVNGTPADCVKLGVLELL--GEKPDLVVSGINPGPNVGVNLNYSGTVSAAREAALLGIPAIAVSVS----NPYGTHFSDAARFMQDLVADVAERGLPKGVFLNV 163          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_FLAPJ (5'-nucleotidase surE OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=surE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.333e-21
Identity = 61/143 (42.66%), Postives = 87/143 (60.84%), Query Frame = 1
Query:  271 SKPVLLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVS--SAEINGATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISL---NWKKD 684
            SKP++LVTN DGI +PG+  L+  +   G   V V AP S +S  GH++T+  T+ ++  SAE    T Y  SGTPVDCV LA++  L    KP L +SG+N GS+   ++ YSG ++ A EA I G+P++  SL   +W  D
Sbjct:    2 SKPLILVTNDDGISAPGIRSLIAVMQEIG--TVVVVAPDSPQSAMGHAITINSTLHLNKISAENAAVTEYSCSGTPVDCVKLAVNEILKQ--KPDLCVSGVNHGSNSSINVIYSGTMSAAVEAGIEGIPAIGFSLLDYDWNAD 140          
BLAST of DY303080 vs. ExPASy Swiss-Prot
Match: SURE_CLOB8 (5'-nucleotidase surE OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=surE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.980e-21
Identity = 58/160 (36.25%), Postives = 92/160 (57.50%), Query Frame = 1
Query:  283 LLVTNGDGIESPGLVYLVEALVREGLYNVHVCAPQSDKSVSGHSVTLRETIAVSSAEING--ATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALICGVPSLSISLNWKKDESQESDFKDAVSVCLPLINAATRD 756
            +L+TN DGI +PG++ L + + +E  + V + AP+  KS S HS+++   I +    I G    AY VSGTP DC  + LS   F      LVISGIN+G + G  + YSG V+ A E  I G+PS+++S++ +  +  E D+  AV   + +++ A  +
Sbjct:    3 ILITNDDGINAPGIIALAKEISKE--HKVTIVAPKDQKSASSHSISIHSPIKIKEEFIEGLDCKAYSVSGTPADCTQVGLS---FLKENIELVISGINKGPNVGTDILYSGTVSAAIEGTIYGIPSIAVSMDVEYGKDDE-DYSKAVKWAIKVLDIAKEE 156          
The following BLAST results are available for this feature:
BLAST of DY303080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 495
Match NameE-valueIdentityDescription
SURE_DESHY1.322e-2445.745'-nucleotidase surE OS=Desulfitobacterium hafnien... [more]
SURE_DESHD1.322e-2445.745'-nucleotidase surE OS=Desulfitobacterium hafnien... [more]
SURE_CAMJR9.473e-2341.185'-nucleotidase surE OS=Campylobacter jejuni (stra... [more]
SURE_CAMJJ9.473e-2341.185'-nucleotidase surE OS=Campylobacter jejuni subsp... [more]
SURE_CAMJE9.473e-2341.185'-nucleotidase surE OS=Campylobacter jejuni GN=su... [more]
SURE_CAMJ89.473e-2341.185'-nucleotidase surE OS=Campylobacter jejuni subsp... [more]
SURE2_CHLCV9.473e-2339.865'-nucleotidase surE 2 OS=Chlamydophila caviae GN=... [more]
SURE_DESAA1.047e-2138.465'-nucleotidase surE OS=Desulfatibacillum alkenivo... [more]
SURE_FLAPJ2.333e-2142.665'-nucleotidase surE OS=Flavobacterium psychrophil... [more]
SURE_CLOB83.980e-2136.255'-nucleotidase surE OS=Clostridium beijerinckii (... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ4YM08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY303080 ID=DY303080; Name=DY303080; organism=Citrus clementina; type=EST; length=966bp
TCTCTTTAGGGTTTTGTTTTGTCCAATTTCTCTGCTCAAAAAAGCACTTC
AATTTGAAAAAAAAAAGAAAAGGGAAACATGACTTCTGTGAGAAACAACT
TAATGCCTCCAGGTCTTGTGTCTAACCTGGAACAAGTGCTTTTAAACAAG
AAGAAGAAGAGTAAAGACAATGAAGATGATGGTGATGATGGCACCAGTAA
GCAATCAAACGAAGAGGCCAATGAATCAACGGAGCCCTCTACTTCTGATT
CGACGGAGAATGTTGATAGTTCAAAGCCTGTGCTTTTGGTCACAAATGGG
GATGGAATTGAGTCTCCTGGCCTTGTTTATCTTGTTGAAGCTTTGGTTCG
TGAAGGGCTCTACAATGTCCACGTTTGCGCTCCTCAATCGGACAAATCAG
TGTCAGGTCATTCTGTGACACTCCGAGAAACGATTGCTGTAAGTTCTGCT
GAAATTAATGGTGCCACAGCGTATGAAGTTTCAGGGACTCCTGTGGATTG
TGTGTCATTAGCACTATCTGGGGCACTATTTTCTTGGTCAAAGCCTTTGC
TGGTAATTAGTGGAATCAACCGAGGTTCAAGCTGTGGTCATCACATGTTC
TACTCAGGTGTTGTTGCCGGAGCCAGAGAGGCATTAATTTGTGGTGTACC
TTCTCTGTCCATATCCCTAAACTGGAAGAAAGATGAAAGCCAAGAGAGTG
ATTTCAAGGATGCAGTCAGTGTCTGTTTACCTTTGATAAATGCTGCTACT
AGAGATATTGGAAAGGGAATTTTCCAAGGAGTTGCTTGCTCAATGTAGAA
ATCCCGACATCTCCATTAACCAACAAGGGTTTCAAATTTACCCAAACAAA
GCATGTGGAAGACCACTCCTAACTGGCAAGCTGTTTCGGCCAACCGGTAT
CCTGCTGGGACTTTTATGTCTAATCCACAAAAGTCCTGGCCCACAGCCTT
GCCCGCTTTGCCCAAG
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