DY303140

Overview
NameDY303140
Unique NameDY303140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length896
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF17_ARATH (Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.300e-31
Identity = 60/80 (75.00%), Postives = 65/80 (81.25%), Query Frame = 3
Query:  483 KPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPT 722
            +P  PE EQLKCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWT+GGALRNIP+GGGTRKSN  KR    P  +  N T
Sbjct:   24 QPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSN--KRSGSSPSSNLKNQT 101          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.698e-31
Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 3
Query:  453 MQDPATF---------NPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQETAN 746
            MQDPA +            +P F E EQLKCPRC+S NTKFCYYNNYNLSQPRHFCK+CRRYWT+GGALRN+P+GGG+RK+ TK+        S  + + ++++T N
Sbjct:    1 MQDPAAYYQTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKN 107          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.139e-27
Identity = 57/114 (50.00%), Postives = 71/114 (62.28%), Query Frame = 3
Query:  504 EQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPT--------RKSQETANTQSMLQAAATTSTSSQEPAVTLPGA 821
            + LKCPRC S NTKFCYYNNYNLSQPRHFCKNCRRYWT+GG LRN+P+GGG RK+   K ++     S   PT         +   T +  S   ++ T S S+   AV++  A
Sbjct:   49 QSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKTKQVPSSSSADKPTTTQDDHHVEEKSSTGSHSSSESSSLTASNSTTVAAVSVTAA 162          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.148e-26
Identity = 54/90 (60.00%), Postives = 63/90 (70.00%), Query Frame = 3
Query:  510 LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQETANTQSMLQAAATT 779
            LKCPRCESTNTKFCY+NNY+L+QPRHFCK CRRYWTRGGALRN+P+GGG R++   K        S SN    S  T+N  S     A+T
Sbjct:   89 LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK--------SNSNNNNNSTATSNNTSFSSGNAST 170          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF22_ARATH (Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.148e-26
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 3
Query:  495 PESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSS 791
            P    LKCPRC+S NTKFCY+NNYNL+QPRHFCK CRRYWTRGGALRN+P+GGG R++   K        S ++ +  S +   + SM+ A + T+TS+
Sbjct:   89 PPEGALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGK--------SGNSKSSSSSQNKQSTSMVNATSPTNTSN 179          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.663e-26
Identity = 55/80 (68.75%), Postives = 62/80 (77.50%), Query Frame = 3
Query:  498 ESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPD----PSRSNPTR 725
            + + LKCPRC S NTKFCYYNNY+LSQPRHFCK+CRRYWTRGGALRN+PIGGG RK  TKK  KP+      PS S+  R
Sbjct:   37 DQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRK--TKKSIKPNSSMNTLPSSSSSQR 114          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.663e-26
Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 3
Query:  495 PESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQETANTQS 755
            P +  LKCPRC+S+NTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+P+GGG R++N K +   + +   S+ + K   + N QS
Sbjct:   72 PLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGK---NGNLKSSSSSSKQSSSVNAQS 155          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.785e-26
Identity = 51/98 (52.04%), Postives = 66/98 (67.35%), Query Frame = 3
Query:  510 LKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQEPA 803
            LKCPRC+STNTKFCY+NNY+L+QPRHFCK CRRYWTRGGALR++P+GGG R++   K        S S+   KSQ++A +       A  +     P+
Sbjct:   95 LKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRTKNSSGGGGGSTSSGNSKSQDSATSNDQYHHRAMANNQMGPPS 192          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF14_ARATH (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.785e-26
Identity = 64/144 (44.44%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  432 NLLVFKRMQDPATFNPMKPHFPESEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQEPAVTLPGAVARESGTEHDPKSY 863
            N++V    Q      P +P      QLKCPRC+S+NTKFCYYNNY+LSQPRHFCK C+RYWTRGG LRN+P+GG  RK+   KR           P+  +  TA+T S      TT++SS       P  ++  S   H P  Y
Sbjct:    5 NMIVASSHQQQQQQQPQQPQ----PQLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVKR-----------PSTATTTTASTVS------TTNSSSPNN----PHQISHFSSMNHHPLFY 123          
BLAST of DY303140 vs. ExPASy Swiss-Prot
Match: DOF16_ARATH (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.161e-26
Identity = 57/119 (47.90%), Postives = 74/119 (62.18%), Query Frame = 3
Query:  462 PATFNPMKPHFPE---SEQLKCPRCESTNTKFCYYNNYNLSQPRHFCKNCRRYWTRGGALRNIPIGGGTRKSNTKKRQKPDPDPSRSNPTRKSQETANTQSMLQAAATTSTSSQEPAVT 809
            P    P    +P    +E L CPRC ST TKFCYYNNYNL+QPR++CK+CRRYWT+GG LR++P+GGGTR+S++K+              R    TA + S   +  TT+T  QEPA T
Sbjct:   10 PTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRSSSKRH-------------RSFSTTATSSSSSSSVITTTT--QEPATT 113          
The following BLAST results are available for this feature:
BLAST of DY303140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DOF17_ARATH1.300e-3175.00Dof zinc finger protein DOF1.7 OS=Arabidopsis thal... [more]
DOF31_ARATH1.698e-3156.07Dof zinc finger protein DOF3.1 OS=Arabidopsis thal... [more]
DOF54_ARATH1.139e-2750.00Dof zinc finger protein DOF5.4 OS=Arabidopsis thal... [more]
DOF24_ARATH2.148e-2660.00Dof zinc finger protein DOF2.4 OS=Arabidopsis thal... [more]
DOF22_ARATH2.148e-2653.54Dof zinc finger protein DOF2.2 OS=Arabidopsis thal... [more]
DOF57_ARATH3.663e-2668.75Dof zinc finger protein DOF5.7 OS=Arabidopsis thal... [more]
DOF11_ARATH3.663e-2658.62Dof zinc finger protein DOF1.1 OS=Arabidopsis thal... [more]
DOF51_ARATH4.785e-2652.04Dof zinc finger protein DOF5.1 OS=Arabidopsis thal... [more]
DOF14_ARATH4.785e-2644.44Dof zinc finger protein DOF1.4 OS=Arabidopsis thal... [more]
DOF16_ARATH8.161e-2647.90Dof zinc finger protein DOF1.6 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ4YO24RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY303140 ID=DY303140; Name=DY303140; organism=Citrus clementina; type=EST; length=896bp
AAAATCAAAAACCCAATTGGAAAGTTGAGTTTCTAAGTGTAGTTGTGTGG
AACAACTTGAAGCTTTTGCTTTTTCTTTTTGGGTTCTTTTGCCCTGTTTT
AGGGACATGGAATTTGGAGTTTATGGTAGAGCTTGAAAGTTAGAAACTTT
AGGAGCTTTTGATGATCTTTTTCATTTCTATGGAAACTAATGTTTGTTTC
TGAAAAAATATCTTGTTCTTTTGTCTTCTTTTAAGTCTCTTTTCAGCCTT
TTTGCCACTTCACTGGCTAAAAGCTTTTTATCCAATTTTCACTAACCTCC
CAACTTCAGATCTTTACCTCACTTTCTCATTACAAGTCCAATTTTCCTGG
AAAATTGTCAAGAGCTAACCAAATCCTCAAACTAAAGCCAGCCCGCTTCA
CCAAACCATCAACAAACACAAATCAAAATCTAATCTTTTGGTCTTCAAGA
GAATGCAGGATCCAGCAACATTTAATCCGATGAAGCCCCATTTTCCGGAA
TCGGAGCAGCTGAAATGCCCCCGCTGTGAGTCAACAAACACCAAATTCTG
CTACTACAACAACTACAATCTCTCTCAGCCTCGCCACTTTTGCAAGAACT
GCAGACGGTACTGGACCAGAGGGGGTGCCCTTAGAAACATTCCCATCGGT
GGTGGTACCCGTAAAAGTAACACCAAGAAGCGCCAGAAGCCTGACCCAGA
TCCTTCCCGGTCCAACCCGACCCGGAAATCTCAAGAAACAGCCAACACAC
AATCAATGTTACAGGCCGCAGCAACTACTAGTACTAGTTCACAGGAACCT
GCCGTGACTTTGCCCGGTGCAGTGGCCCGAGAGTCTGGGACGGAGCACGA
CCCCAAAAGTTATACGGGTTGCCATTGGATCAGGATCATAAGATGC
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