DY303159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY303159 vs. ExPASy Swiss-Prot
Match: SFRS7_MOUSE (Splicing factor, arginine/serine-rich 7 OS=Mus musculus GN=Sfrs7 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.056e-19 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK----NGWRVELSHNXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 314 +VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK + RVELS + +CYECGE GH+A +C Sbjct: 41 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 148
BLAST of DY303159 vs. ExPASy Swiss-Prot
Match: SFRS7_HUMAN (Splicing factor, arginine/serine-rich 7 OS=Homo sapiens GN=SFRS7 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.056e-19 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK----NGWRVELSHNXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 314 +VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK + RVELS + +CYECGE GH+A +C Sbjct: 12 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
BLAST of DY303159 vs. ExPASy Swiss-Prot
Match: SFRS7_BOVIN (Splicing factor, arginine/serine-rich 7 OS=Bos taurus GN=SFRS7 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.056e-19 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGK----NGWRVELSHNXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 314 +VYVGNL + + +LE F +G +R+VW+AR PPG+AF++F+D RDA+DA+R LDGK + RVELS + +CYECGE GH+A +C Sbjct: 12 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 119
BLAST of DY303159 vs. ExPASy Swiss-Prot
Match: RSP6_CAEEL (Probable splicing factor, arginine/serine-rich 6 OS=Caenorhabditis elegans GN=rsp-6 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.991e-14 Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 3 Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN----GWRVELS 203 +VYVG L S + ++LE+ F FG IR VWVARRPPG+AF+++DD RDA+DA+R LDG RVELS Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARVELS 74
BLAST of DY303159 vs. ExPASy Swiss-Prot
Match: SFRS3_MOUSE (Splicing factor, arginine/serine-rich 3 OS=Mus musculus GN=Sfrs3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.601e-14 Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 3 Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN----GWRVELSH 206 +VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+ RVELS+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 82
BLAST of DY303159 vs. ExPASy Swiss-Prot
Match: SFRS3_HUMAN (Splicing factor, arginine/serine-rich 3 OS=Homo sapiens GN=SFRS3 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.601e-14 Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 3 Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN----GWRVELSH 206 +VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+ RVELS+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 82
BLAST of DY303159 vs. ExPASy Swiss-Prot
Match: SFRS3_BOVIN (Splicing factor, arginine/serine-rich 3 OS=Bos taurus GN=SFRS3 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.601e-14 Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 3 Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDGKN----GWRVELSH 206 +VYVGNL + ++ +LE F +G +RSVWVAR PPG+AF++F+D RDA DA+RELDG+ RVELS+ Sbjct: 11 KVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 82
BLAST of DY303159 vs. ExPASy Swiss-Prot
Match: RBP1_DROME (RNA-binding protein 1 OS=Drosophila melanogaster GN=Rbp1 PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.291e-13 Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 3 Query: 3 RVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDYRDAQDAIRELDG 176 +VYVGNL S S+ ++E F +G +R+VWVAR PPG+AF++F+D RDA+DA R LDG Sbjct: 12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69 The following BLAST results are available for this feature:
BLAST of DY303159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY303159 ID=DY303159; Name=DY303159; organism=Citrus clementina; type=EST; length=934bpback to top |