DY304290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VP282_ARATH (Vacuolar protein sorting-associated protein 28 homolog 2 OS=Arabidopsis thaliana GN=VPS28-2 PE=1 SV=2) HSP 1 Score: 325.479 bits (833), Expect = 3.663e-88 Identity = 163/208 (78.37%), Postives = 176/208 (84.62%), Query Frame = 2 Query: 188 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSFMAALPNAG 811 MEVKLWNDKREREMYENFAEL+AIIKATEKLEKAY+RD+I+ SEYE+ECQKLI HFKTLS+TLKD VP+IERFADTYKMDCPAAL RLVTSG+PATVEHR ECVQNFIT+MDSLKLNMVAVDQV+P +ILPPDFEGKTKMK+W+SRLSKMGAADELTEQQSRQLHFDLESSYNSFMAALP AG Sbjct: 2 MEVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSATLKDTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQNFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMGAADELTEQQSRQLHFDLESSYNSFMAALPKAG 209
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VP281_ARATH (Vacuolar protein sorting-associated protein 28 homolog 1 OS=Arabidopsis thaliana GN=VPS28-1 PE=1 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 2.010e-86 Identity = 160/208 (76.92%), Postives = 175/208 (84.13%), Query Frame = 2 Query: 188 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSFMAALPNAG 811 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAY+RD+IS SEYETECQKLI HFKTLS++LKD+VP+IERFA+TYKMDC AA+ RLVTSGVPATVEHR ECVQNFIT+MDSLKLNMVAVDQV+P +ILPPDFEGK KMK+W+ RLSKMGA+DELTEQQ+RQLHFDLESSYNSFMAALPNAG Sbjct: 1 MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSASLKDMVPNIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQNFITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASDELTEQQARQLHFDLESSYNSFMAALPNAG 208
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VPS28_DICDI (Vacuolar protein sorting-associated protein 28 OS=Dictyostelium discoideum GN=vps28 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.137e-47 Identity = 99/203 (48.77%), Postives = 129/203 (63.55%), Query Frame = 2 Query: 191 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSFMAAL 799 EVKL+N+ EREMYEN AELY+IIK TE LEKAY+RD +S +Y T C KLIA FK+ + LKD V ++ +F Y ++C AA +RLV G P+T+EH E VQ FIT MDS++L +V+VD ++P L P FEGK K+K+WIS L++M A DEL + QSRQL FDL++SYN F A+ Sbjct: 84 EVKLFNNNIEREMYENLAELYSIIKVTEHLEKAYIRDDVSPKDYTTACSKLIAQFKSSQTLLKDQVSNVGQFMKDYDLNCKAAFDRLVIKGFPSTLEHNTNESSTDSAMAKNVAEAVQLFITTMDSIRLKLVSVDGIYPLLSDLMESLNKNQWLGPTFEGKEKIKNWISILNQMKATDELDDDQSRQLLFDLDNSYNIFYKAI 286
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VPS28_HUMAN (Vacuolar protein sorting-associated protein 28 homolog OS=Homo sapiens GN=VPS28 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.157e-33 Identity = 75/200 (37.50%), Postives = 114/200 (57.00%), Query Frame = 2 Query: 191 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDI-VPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSF 787 EVKL+ + RERE Y+N AEL+A++K + LEKAY++D +S SEY C +L+ +K ++ + SI+ F +++DCP A+ R + P T++ + V FIT MD L+L + A+D++ P + LPPDFEG+ + W+ LS M A+DEL + Q RQ+ FDLES+YN+F Sbjct: 23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIKD------DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAF 215
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VPS28_RAT (Vacuolar protein sorting-associated protein 28 homolog OS=Rattus norvegicus GN=Vps28 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.743e-33 Identity = 73/200 (36.50%), Postives = 114/200 (57.00%), Query Frame = 2 Query: 191 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDI-VPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSF 787 EVKL+ + RERE Y+N AEL+A++K + LEKAY++D ++ +EY C +L+ +K ++ + SI+ F +++DCP A+ R + P T++ + V FIT MD L+L + A+D++ P + LPPDFEG+ + W+ LS M A+DEL + Q RQ+ FDLES+YN+F Sbjct: 30 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIKD------DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAF 222
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VPS28_MOUSE (Vacuolar protein sorting-associated protein 28 homolog OS=Mus musculus GN=Vps28 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.743e-33 Identity = 73/200 (36.50%), Postives = 114/200 (57.00%), Query Frame = 2 Query: 191 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDI-VPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSF 787 EVKL+ + RERE Y+N AEL+A++K + LEKAY++D ++ +EY C +L+ +K ++ + SI+ F +++DCP A+ R + P T++ + V FIT MD L+L + A+D++ P + LPPDFEG+ + W+ LS M A+DEL + Q RQ+ FDLES+YN+F Sbjct: 23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIKD------DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAF 215
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VPS28_BOVIN (Vacuolar protein sorting-associated protein 28 homolog OS=Bos taurus GN=VPS28 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 5.743e-33 Identity = 73/200 (36.50%), Postives = 114/200 (57.00%), Query Frame = 2 Query: 191 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDI-VPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSF 787 EVKL+ + RERE Y+N AEL+A++K + LEKAY++D ++ +EY C +L+ +K ++ + SI+ F +++DCP A+ R + P T++ + V FIT MD L+L + A+D++ P + LPPDFEG+ + W+ LS M A+DEL + Q RQ+ FDLES+YN+F Sbjct: 23 EVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMER-IKEDRPITIKD------DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAF 215
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VPS28_DROME (Vacuolar protein sorting-associated protein 28 homolog OS=Drosophila melanogaster GN=Vps28 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.279e-32 Identity = 77/200 (38.50%), Postives = 111/200 (55.50%), Query Frame = 2 Query: 191 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLK-DIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSF 787 EVKL+ + RERE Y+N A+LYAII ++LEKAY+RD I+ EY C K + +K ++ D PS+E F +++DCPAAL R + P T+ E V FIT MD L+L + +D + P +++P DF+ K K++ W+ L++M A+DEL+E Q RQ FDLES+Y F Sbjct: 11 EVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSKYLVQYKVAFKQVQCDEFPSVETFVKKFRLDCPAALER-IREDRPITIRD------DKGNTSKCIAEIVSLFITIMDKLRLQINTMDALQPDVKDLADNMNRLSLIPEDFDAKLKVEKWLGSLNEMQASDELSEGQVRQFLFDLESAYADF 203
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VPS28_CAEEL (Vacuolar protein sorting-associated protein 28 homolog OS=Caenorhabditis elegans GN=Y87G2A.10 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.198e-30 Identity = 79/207 (38.16%), Postives = 118/207 (57.00%), Query Frame = 2 Query: 179 NTPMEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLSSTLKDIVPSIERFADTYKMDCPAALNRLVTSGVPATVEHRXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSFMAAL 799 N EV+L+ + ERE EN +EL+A++ A E LEK + RD +S+ EY++EC KLI +K ++ L SIE FA Y++ CPAA+ R + G P TV+ V+ FIT +D+L+LN AVD ++P + +P D TK+K W RLS M A+DE++++ +RQ+ FD+ES+Y +F AL Sbjct: 7 NLMREVRLFENHSEREQMENLSELFAVLNALEHLEKMFSRDHVSADEYKSECFKLIDQYK-VTMRLVHGATSIEDFAKKYRLHCPAAIER-IREGRPITVKD------DQGNVLKHIASIVEQFITFLDALRLNTRAVDDLYPGLDDLYNAINTTSRVPIDAIVTTKVKKWHDRLSSMAASDEISDEDARQMIFDVESAYQAFNKAL 205
BLAST of DY304290 vs. ExPASy Swiss-Prot
Match: VPS28_YEAST (Vacuolar protein sorting-associated protein 28 OS=Saccharomyces cerevisiae GN=VPS28 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.337e-26 Identity = 81/232 (34.91%), Postives = 115/232 (49.57%), Query Frame = 2 Query: 158 INRLIHLNTPMEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKT-LSSTLKDIV----PSIERFADTYKMDCPAALNRLVTSGVPATVEH-------------RXXXXXXXXXXXXXXXECVQNFITAMDSLKLNMVAVDQVHPXXXXXXXXXXXXTILPPDFEGKTKMKDWISRLSKMGAADELTEQQSRQLHFDLESSYNSFMAAL 799 I++L H P+ K ++E+ E +E+Y+I+ + +EKAY++D I ++Y KL+ FK L+S K+ + SIE F DTY + A+ RL G+P T EH + E NFIT MD+LKLN A DQ+HP T DFE ++K+ DWI R++K+ D LTE Q R+L FDLE +Y SF A L Sbjct: 14 ISQLFHDEVPLFDNSITSK-DKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEAFCDTYNITASNAITRL-ERGIPITAEHAISTTTSAPSGDNKQSSSSDKKFNAKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVT--RDDFENRSKLIDWIVRINKLSIGDTLTETQIRELLFDLELAYKSFYALL 241 The following BLAST results are available for this feature:
BLAST of DY304290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304290 ID=DY304290; Name=DY304290; organism=Citrus clementina; type=EST; length=1145bpback to top |