DY304297
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.224e-35 Identity = 100/290 (34.48%), Postives = 150/290 (51.72%), Query Frame = 2 Query: 95 VRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK--FDAVLDTIGAPETEILGLNFLRR--GGHYMTLHGETAAFADHYGLPLGL 886 VR + TTS R+ V+P ++G EVL N+ +P + PNEV+++ A SINP+D MRSGYG + +PL PL LGRD+SG V G VR G EV+ A+ P +GT +++ V+S +E++ KP S+TH A+++P+ ALTAW A+ +++ G+R Q A HV+A C + + V GA+ +DY S ++E +K FD +LD +G TE L FL++ G Y+TL D G+ G+ Sbjct: 30 VRKISTTSPRSTVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWK-QGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILDNVGG-STETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGM 317
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: RT4I1_MOUSE (Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 4.211e-35 Identity = 99/289 (34.26%), Postives = 151/289 (52.25%), Query Frame = 2 Query: 98 RFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPETEILGLNFLRR--GGHYMTLHGETAAFADHYGLPLGL 886 R + TTS R+ V+P ++G EVL N+ +P + PNEV+++ A S+NP+D MRSGYG + +PL PL LGRD+SG V G V+ G EV+ A+ P +GT +++ V+S +E++ KP S+TH A+++P+ ALTAW A+ +S+ G+R Q A G HV+A C + + V GA++ +DY+ +E +K FD +LD +G TE LNFL++ G Y+TL D G+ G+ Sbjct: 31 RGISTTSARSTVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWK-QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVGTFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVGG-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGM 317
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: RT4I1_HUMAN (Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 2.311e-33 Identity = 98/290 (33.79%), Postives = 149/290 (51.38%), Query Frame = 2 Query: 95 VRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPETEILGLNFLRR--GGHYMTLHGETAAFADHYGLPLGL 886 VR + TTS R+ V+P ++G EVL N+ +P + PNEV+V+ A S+NP+D MRSGYG + +PL PL LGRD+SG V G V+ G EV+ A+ P +GT +++ V+S +E++ KP S+TH A+++P+ ALTAW A+ +++ G+R Q A HV+A C + + V GA+ +DY S +E +K FD +LD +G TE +FL++ G Y+TL D G+ G+ Sbjct: 30 VRRISTTSPRSTVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGM 317
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: RT4I1_DANRE (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 3.123e-30 Identity = 90/275 (32.73%), Postives = 141/275 (51.27%), Query Frame = 2 Query: 125 AVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSV----ASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPETEILGLNFLR--RGGHYMTLHGETAAFADHYGLPLGL 886 A V+ ++G +VL N +P + PNEV+V+ A +NP+D MR GYG + +PL PLILGRD+SGE+ G V+ G +V+ A+ P +G+ A++ V+S +E++ KP S+ H +A++IP+ A TAW A+ +++ F++ A G HV+ TC + V GA+ VDY++ +E +K KFD +LD+IG ETE L+ L+ G ++TL D GL G+ Sbjct: 31 AWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWK-QGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQMVKAWGAHVTVTCSQNAERLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILDSIGG-ETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGM 303
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: RT4I1_DICDI (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 7.450e-24 Identity = 76/259 (29.34%), Postives = 131/259 (50.58%), Query Frame = 2 Query: 155 EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL--PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA----LKCAARMSEGQRXXXXXXXXXXXXXXXQF--SVASGCHVSATCGSKSIDRVLAAG-AEQAVDYSSKDIELAIKGKFDAVLDTI----GAPETEILGLNFLRRGGHYMTLHGETAAFADHYGLPLGLPI 892 ++LE + ++ VP ++VL++ + SINPLD MR GY SI + L P+ILGR+ SGE+ +G SV +G +V+ A P ++ G++ +Y + E E++ KP ++TH +++IPFA+LTAW A L +++ + Q + VS TC K +++ + +DY++ I KFD + + E E ++ L+ GG+ + +G F+D G+ GLP+ Sbjct: 14 DLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSIVDLKLKLPIILGRECSGEIVEIGDSVWDYEIGDQVWSASPPFSM-GSHCEYITVDESEISLKPKNLTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTKILVNGGNGSVGFFILQLLKKHLNVNQVSTTCNIKHFEKLKKLTLVNETIDYNNLKINDNDNNKFDLIFNCYDGGKNQNENEKKCIDALKDGGNLIGFNGPLVKFSDKDGVLSGLPM 271
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 8.237e-23 Identity = 72/247 (29.15%), Postives = 126/247 (51.01%), Query Frame = 2 Query: 122 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFS--VASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETEILGLNFLRRGGHYMTLHG 841 +A V +GG +VL++ N+ VP++K ++VL++ A ++NP+D + R G ++ P LP + G D++G V VG++V+ L G EV+ + A+ G+ A+Y + E L KP ++ A A+ +P A TA L S G+ Q + V V+AT ++ ++ V + GA+ A+DY+ ++IE + K+D V D IG + + ++ GG + L G Sbjct: 79 KAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATDSP-LPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGL-VRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIE-DLPDKYDVVFDAIGMCDKAV---KVIKEGGKVVALTG 319
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.315e-20 Identity = 62/197 (31.47%), Postives = 101/197 (51.27%), Query Frame = 2 Query: 146 GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM-----SEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD 721 GG + L+ V VPD K +E+L++ A ++NP+D +++ G R + P I G D++GEV G++V G +V L A G A+YAV E+ +P V+ A+ +A+P AALTA +AL A + E + Q + HV+ATCG++++D V GA++ +DY + + Sbjct: 16 GGTDALK-HVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRKFPTIPGTDVAGEVVQAGSAVNRFKTGDKVVAVL-SHATGGALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLGNTHVTATCGARNLDFVKGLGADEVLDYKTPE 210
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.608e-18 Identity = 72/247 (29.15%), Postives = 123/247 (49.80%), Query Frame = 2 Query: 122 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDYSSKD----IELAIKGK---FDAVLDTIGAPETEILGLNFLRRGGHYMTL 835 RA+ + FGGPEVL+++ +V VP + ++VL++ A +NP++T +RSG Y R +P LP G D++G + +VG V + G VF + V G YA++A+ ++D + P P ++ +A+ TA RAL +AR G+ Q + A G V T GS+ + VL GA + ++ + I++++ K D +++ + A E L L GG + + Sbjct: 9 RAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSR---KPALPYTPGSDVAGIIESVGDKVSAFKKGDRVFCY---STVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKMSVGDKDKGVDVIIEML-ANENLSNDLKLLSHGGRVVVV 248
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.608e-18 Identity = 70/250 (28.00%), Postives = 116/250 (46.40%), Query Frame = 2 Query: 122 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETEIL-----------GLNFLRRGGHYMTL 835 RA+ + FGGPEVL+++ +V VP K ++VL++ +A +NP+DT +RSG +PLLP G D++G + AVG SV + G VF + G YA+YA+ ++ + P + +AI TA+RAL +A + G+ Q + A G V T ++ + VL GA + ++ D D + ++G +++ LN L GG + + Sbjct: 9 RAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHN--IKPLLPYTPGFDVAGIIEAVGESVSAFKKGDRVFTT---RTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEEGQKIVLENGAHKVFNHKEADY-------IDKIKKSVGEKGVDVIIEMLANVNLSNDLNLLSHGGRVIVV 246
BLAST of DY304297 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.100e-18 Identity = 65/197 (32.99%), Postives = 99/197 (50.25%), Query Frame = 2 Query: 122 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDY 709 RA+ + FGGPEVL+V+ +V VP K ++VL++ A INP++T +RSG I PLLP G D++G V ++G V + G VF + + G YA+YA+ S+ + P + +AI TA RAL +AR G+ Q + A G V T G++ + VL GA + ++ Sbjct: 9 RAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRI--PLLPYTPGTDVAGVVESIGNDVSAFKKGDRVFTT---STISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGTEEGQKVVLQNGAHEVFNH 200 The following BLAST results are available for this feature:
BLAST of DY304297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304297 ID=DY304297; Name=DY304297; organism=Citrus clementina; type=EST; length=1285bpback to top |