DY304307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 2.162e-57 Identity = 123/239 (51.46%), Postives = 167/239 (69.87%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETL 767 DNR++IG SGA+ LV LL +D TQE++VTALLNLS+++NNK I +AGAI+ L++VL+ G+ +K+N+A L SL++IEENK IG GAI PLV LL G+ RGKKDA T L+ L ++NK V +GAVR L+ ++ GM +KA+ VL+ LA I EGR AI +E GI LVE +E GS +GKE A LLQL S + ++++EG +PPLVALSQ+G+ RA+ K +TL Sbjct: 574 DNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKVQTL 811
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 1.073e-56 Identity = 128/249 (51.41%), Postives = 166/249 (66.67%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTG-TETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ 794 DNR++I A+P+LV LL +D Q +VT LLNLS+++NNK+LI +GAI L++VLKTG E +K N+A L SL++IEE K+ IG GAI PLV LL GS GKKDA T L+ L +NK + + AGAVR LV ++ GM EKA+VVL+ LA + EG+ AI EE GI LVE +E GS +GKE A LLQLC S K ++REG IPPLVAL+++G+ R K KA+ LL Y + RQ Sbjct: 454 DNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM-DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQ 701
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 4.220e-53 Identity = 122/248 (49.19%), Postives = 164/248 (66.13%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGA-IPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPR 791 +NRV IG GA+ L+ LL + TQEH+VTALLNLS+ E NK +I GAI+ LV+VL TG + +K+N+A +L SL++++ N+ IG A I LV+LL G+ RGKKDA + L+ L NK R V A AV+ LV +L E M +KA+ +L+ L+ + EGR+AIV E GI LVE ++ GS +GKE A LLQLC S K L+++EG IPPLVALSQ+G+ RAK KA+ LL + R R Sbjct: 505 ENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLE-MVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQR 751
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 5.511e-53 Identity = 115/245 (46.94%), Postives = 156/245 (63.67%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLRE 785 DNRV I E+GA+P LV LL DP TQEHSVTALLNLS++E NK I +AGAI +V VLK G+ +++NAA L SL++I+ENK +IGA GAI L+SLL G+ RGKKDA T ++ LC + NK RAV G V PL +L G GM ++A+ +L++L+ EG+ AI E I LVE I GS + +E A L LC +++ + G L L++ G+ RAK KA +LL +++ Sbjct: 378 DNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLELIQQ 622
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.773e-51 Identity = 118/262 (45.04%), Postives = 162/262 (61.83%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLL---GYLREPRQEGPSSSP*ENA 827 DNRV I E+GA+P LV LL D QEHSVTALLNLS+ ENNK I +AGAI +V VLK G+ +++NAA L SL++I+ENK +IGA GAIPPLV LL G+ RGKKDA T L+ LC + NK +A+ AG + L +L G GM ++A+ +L++L+ EG+ I + + +LVE I GS + +E A L+ LC+ ++ + G + PL+ L+ G+ R K KA LL L E ++E S P E A Sbjct: 385 DNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAEQQKETAVSQPEEEA 646
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 3.950e-51 Identity = 117/247 (47.37%), Postives = 159/247 (64.37%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCS-DPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLA-GQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLRE 785 DNR+LI E+GA+P LV LL D TQE++VT +LNLS++E+NK LI AGA+ S+V VL+ G+ +++NAA L SL+L +ENK IGA GAI LV LL YGS RGKKDA T L+ LC + NK RAV AG V+PLV ML E MA++A+ +LS+LA + AI+ N I L++ ++ + +E A LL LC + + R G + PL+ LS+ G+ RAK KA +LL LR+ Sbjct: 374 DNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRK 620
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 3.344e-50 Identity = 114/249 (45.78%), Postives = 156/249 (62.65%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLA-GQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ 794 DNR+LI E+GA+P LV LL D TQE+++T +LNLS++ENNK LI AGA+ S+V VL+ GT +++NAA L SL+L +ENK IG GAIP LV LL G+ RGKKDA T L+ LC NK RAV AG V LV ML+ M ++A+ +LS+LA + + AIV+ N + AL+ ++ + +E A LL LC + + R G + PL+ LS+ G+ R K KA +LL LR+ Q Sbjct: 364 DNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLRKACQ 612
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 5.902e-47 Identity = 107/248 (43.15%), Postives = 157/248 (63.31%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ 794 +NRVLI +GA+P LV LL D QE++VT LLNLS+ E NK LI+N GAI +++ +L+ G +++N+A AL SL++++ENK +IG IPPLV LL +G+ RGKKDALT L+ L NK RA+ AG V+PL+ +L + GM ++A+ +L LLA EGR+AI + + I LVE I G+ K KE A LL+L + + ++ G LV ++ +G+ RA+ KA L+ + + Q Sbjct: 412 ENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSEQ 659
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 1.113e-45 Identity = 109/260 (41.92%), Postives = 159/260 (61.15%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCA--ESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLL----GYLREPRQEGPSSS 812 +NR+ I E+GA+P L+ LL SD TQEH+VTALLNLS+HE+NK I ++GA+ S+V+VLK G+ +++NAA L SL++I+E K +IG GAIP LV LL GS RGKKDA L+ LC + NK RA+ AG V ++G++ + ++AM +LS+L+ EG+ AI + LVE I G+ + +E A +L LC+ + + G + PL L+ G+ R K KA LL +L + ++E S S Sbjct: 400 NNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSRFLVQQQEEQESQS 659 HSP 2 Score: 69.3218 bits (168), Expect = 5.219e-11 Identity = 56/181 (30.94%), Postives = 84/181 (46.41%), Query Frame = 3 Query: 243 ETSKQNAACALMSLALIEE--NKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYL 779 +T +Q +A A + L N+ I GAIP L+SLL R ++ A+T L L + NK +S+GAV +V +L E A L L+ I E + I I ALV + +GS +GK+ A L LC N+G +R G +P ++ L + +A +L L Sbjct: 380 DTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQ-GNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSIL 559
BLAST of DY304307 vs. ExPASy Swiss-Prot
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 1.113e-45 Identity = 109/260 (41.92%), Postives = 159/260 (61.15%), Query Frame = 3 Query: 51 DNRVLIGESGAVPALVPLLKCSDPWTQEHSVTALLNLSLHENNKTLITNAGAIKSLVYVLKTGTETSKQNAACALMSLALIEENKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCA--ESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLL----GYLREPRQEGPSSS 812 +NR+ I E+GA+P L+ LL SD TQEH+VTALLNLS+HE+NK I ++GA+ S+V+VLK G+ +++NAA L SL++I+E K +IG GAIP LV LL GS RGKKDA L+ LC + NK RA+ AG V ++G++ + ++AM +LS+L+ EG+ AI + LVE I G+ + +E A +L LC+ + + G + PL L+ G+ R K KA LL +L + ++E S S Sbjct: 400 NNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSRFLVQQQEEQESQS 659 HSP 2 Score: 69.3218 bits (168), Expect = 5.219e-11 Identity = 56/181 (30.94%), Postives = 84/181 (46.41%), Query Frame = 3 Query: 243 ETSKQNAACALMSLALIEE--NKSSIGACGAIPPLVSLLIYGSSRGKKDALTTLYKLCSLKQNKERAVSAGAVRPLVGMLAGQGEGMAEKAMVVLSLLAGIAEGREAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVKNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYL 779 +T +Q +A A + L N+ I GAIP L+SLL R ++ A+T L L + NK +S+GAV +V +L E A L L+ I E + I I ALV + +GS +GK+ A L LC N+G +R G +P ++ L + +A +L L Sbjct: 380 DTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQ-GNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSIL 559 The following BLAST results are available for this feature:
BLAST of DY304307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304307 ID=DY304307; Name=DY304307; organism=Citrus clementina; type=EST; length=1228bpback to top |