DY304308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304308 vs. ExPASy Swiss-Prot
Match: YBEG_SCHPO (Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces pombe GN=SPBC1711.16 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.815e-24 Identity = 54/131 (41.22%), Postives = 78/131 (59.54%), Query Frame = 1 Query: 412 IFGKGLGDLYYASNQMDPYXXXXXXXXXXXXXX-MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPL--KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILG 795 +F G Y+ + + DPY M I P D++++ AR ED++SH+EVY+ E ++ NLYVHH ++P FPLC+ WLD + D GN++AVG+ +P IEIWDLD+ID V P +LG Sbjct: 105 MFSNIRGLAYHENGEKDPYITIDPQEQDDLEREEMQILPTDSLLLAARTEDNLSHVEVYVYEPTE---ENLYVHHDFLLPTFPLCLEWLDYKVGTSDNAPGNYVAVGTFDPEIEIWDLDIIDAVYPAAVLG 232 HSP 2 Score: 26.1794 bits (56), Expect = 1.815e-24 Identity = 11/27 (40.74%), Postives = 16/27 (59.26%), Query Frame = 3 Query: 870 HTDSVPGLCLEQGVQNILANASADKTI 950 HTD+V L + N+L + SAD T+ Sbjct: 253 HTDAVLALSSNRNAHNLLVSGSADTTL 279
BLAST of DY304308 vs. ExPASy Swiss-Prot
Match: PWP1_BOVIN (Periodic tryptophan protein 1 homolog OS=Bos taurus GN=PWP1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.074e-19 Identity = 71/240 (29.58%), Postives = 108/240 (45.00%), Query Frame = 1 Query: 427 LGDLYYASNQMDPYXXXXXXXXXXXXXXMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDXXXXXXXXXXXXSRPLNIKRVVIPIPCLVFAWNKESRIFLLMPVLIKQFRIWECGSRKM*SPLGAPYKIRVQPVAWEPPFPPNSFLLGTF*SVPFVMEGGQGEF*HNSWVFQG 1143 LG Y SN DPY + I P+D +IVC R E D +LEV++ + + + YVHH I++ A+PL + WL+ P D GN++AVG+M P IE+WDLD++D ++P LG S + V L +WNK R L +W+ K + L A + +VQ + + PF + + G++ + + E H W F G Sbjct: 115 LGLTVYGSNDQDPYVTLKDTEQYEREDFL-IKPSDNLIVCGRAEQDQCNLEVHVYNQEED---SFYVHHDILLSAYPLSVEWLNFDPSPDDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKKKKKKGKKNSSADGHTDAV------LDLSWNKLVRNVLASASADNTVILWDMSLGKPAASL-AVHTDKVQTLQFH-PFEAQTLISGSYDKSVALYDCRSPEESHRMWRFSG 342
BLAST of DY304308 vs. ExPASy Swiss-Prot
Match: PWP1_YEAST (Periodic tryptophan protein 1 OS=Saccharomyces cerevisiae GN=PWP1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.140e-19 Identity = 46/120 (38.33%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 511 MTINPNDAVIVCARNEDDVSHLEVYI-------------LEESDGGDPN----------LYVHHHIIIPAFPLCMAWLDCPL--KDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILG 795 + + P+D +++ AR EDDVS+L++Y+ +EE D DP+ LYVHH +++PAFPLC+ WLD + E N+ A+G+ +P IEIW+LD +D+ P +ILG Sbjct: 138 LQVYPSDNLVLAARTEDDVSYLDIYVYDDGAGFHSSDIPVEEGDEADPDVARGLVRDPALYVHHDLMLPAFPLCVEWLDYKVGSNSEEAANYAAIGTFDPQIEIWNLDCVDKAFPDMILG 257 HSP 2 Score: 24.6386 bits (52), Expect = 1.140e-19 Identity = 10/27 (37.04%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 870 HTDSVPGLCLEQGVQNILANASADKTI 950 HTD+V + + +++LA+ SAD T+ Sbjct: 285 HTDAVLSMAHNKYFRSVLASTSADHTV 311
BLAST of DY304308 vs. ExPASy Swiss-Prot
Match: PWP1_HUMAN (Periodic tryptophan protein 1 homolog OS=Homo sapiens GN=PWP1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.392e-19 Identity = 70/240 (29.17%), Postives = 108/240 (45.00%), Query Frame = 1 Query: 427 LGDLYYASNQMDPYXXXXXXXXXXXXXXMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDXXXXXXXXXXXXSRPLNIKRVVIPIPCLVFAWNKESRIFLLMPVLIKQFRIWECGSRKM*SPLGAPYKIRVQPVAWEPPFPPNSFLLGTF*SVPFVMEGGQGEF*HNSWVFQG 1143 LG Y SN DPY + I P+D +IVC R E D +LEV++ + + + YVHH I++ A+PL + WL+ P D GN++AVG+M P IE+WDLD++D ++P LG S + V L +WNK R L +W+ K + L A + +VQ + + PF + + G++ + + + H W F G Sbjct: 116 LGLTVYGSNDQDPYVTLKDTEQYEREDFL-IKPSDNLIVCGRAEQDQCNLEVHVYNQEED---SFYVHHDILLSAYPLSVEWLNFDPSPDDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKKKKKKGKKSSSAEGHTDAV------LDLSWNKLIRNVLASASADNTVILWDMSLGKPAASL-AVHTDKVQTLQFH-PFEAQTLISGSYDKSVALYDCRSPDESHRMWRFSG 343
BLAST of DY304308 vs. ExPASy Swiss-Prot
Match: PWP1_MOUSE (Periodic tryptophan protein 1 homolog OS=Mus musculus GN=Pwp1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.328e-19 Identity = 69/240 (28.75%), Postives = 106/240 (44.17%), Query Frame = 1 Query: 427 LGDLYYASNQMDPYXXXXXXXXXXXXXXMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDC-PLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDXXXXXXXXXXXXSRPLNIKRVVIPIPCLVFAWNKESRIFLLMPVLIKQFRIWECGSRKM*SPLGAPYKIRVQPVAWEPPFPPNSFLLGTF*SVPFVMEGGQGEF*HNSWVFQG 1143 LG Y SN DPY + I P D +IVC R E + +LEV++ + + + YVHH I++ A+PL + WL+ P D GN++AVG+M P IE+WDLD++D ++P LG S + V L +WNK R L +W+ K + L A + +VQ + + PF + + G++ + + H W F G Sbjct: 115 LGLTVYGSNDQDPYVTLKDTEQYEHEDFL-IKPTDNLIVCGRAEQEQCNLEVHVYNQEE---ESFYVHHDILLSAYPLSVEWLNFDPSPDASTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKKKKKKGKKSSSAEGHTDAV------LDLSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTA-HTDKVQTLQFH-PFEAQTLISGSYDKSVALYDCRDPSQNHRQWRFSG 342 The following BLAST results are available for this feature:
BLAST of DY304308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304308 ID=DY304308; Name=DY304308; organism=Citrus clementina; type=EST; length=1253bpback to top |