DY304311

Overview
NameDY304311
Unique NameDY304311
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1305
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 7.109e-22
Identity = 79/256 (30.86%), Postives = 122/256 (47.66%), Query Frame = 3
Query:  126 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVF 878
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G V + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A ALY  VF
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSVALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGALYEYVF 252          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 7.109e-22
Identity = 78/256 (30.47%), Postives = 122/256 (47.66%), Query Frame = 3
Query:  126 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVF 878
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I I   +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A  LY  VF
Sbjct:   23 MVAFKGVWTQTFWKAVTAEFL--AMLIFVLLSLGSTINWGGAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLSAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGISVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYVF 252          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.284e-22
Identity = 78/256 (30.47%), Postives = 122/256 (47.66%), Query Frame = 3
Query:  126 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVF 878
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A ALY  VF
Sbjct:   26 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGALYEYVF 255          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.068e-21
Identity = 77/256 (30.08%), Postives = 122/256 (47.66%), Query Frame = 3
Query:  126 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVF 878
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  + +V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A  LY  VF
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTMV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYVF 252          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 2.701e-21
Identity = 75/254 (29.53%), Postives = 119/254 (46.85%), Query Frame = 3
Query:  126 ILGFEDIFSVKVWRASMAELLGTAVLVF--ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVF 878
            ++ F+ +++   W+A  AE L T + V      TI     +       +++S                ISGGHINP V+ A   T   S +++  YI+AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W  HW++W GP + A +A ALY  VF
Sbjct:   23 MVAFKGVWTQAFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WANHWIYWVGPIMGAVLAGALYEYVF 252          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.528e-21
Identity = 77/256 (30.08%), Postives = 121/256 (47.27%), Query Frame = 3
Query:  126 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKVF 878
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A  LY  VF
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSLGSTINWGGKENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYVF 252          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.027e-20
Identity = 79/251 (31.47%), Postives = 116/251 (46.22%), Query Frame = 3
Query:  141 DIFSVKVW---RASMAELLGTAVLVFALDTIVI-----SSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALY 866
            D+  +++W   RA +AE + T + ++     VI     SS         L ++                ISGGHINP V+F   L    S  RA +YI+AQC+GGI G   +K +    + H ++  G        G   +V  G  T  AL  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR +G A++      WD HW+FWAGP I  +A A Y
Sbjct:   27 DVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGI----MKHQYNANG--------GGANMVASGYSTGTALGAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAY 260          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.287e-20
Identity = 89/294 (30.27%), Postives = 125/294 (42.52%), Query Frame = 3
Query:   48 QPFATPKQEQRLMDEEKKQNPSTWKKILGFE--DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALY 866
            QP  T  Q  +   + K+  P+ +     FE  ++ S   WRA +AE + T + ++    I + ++    ++PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K              N +AH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HWVFW GP I     ALY
Sbjct:   19 QPIGTSAQSDK---DYKEPPPAPF-----FEPGELSSWSFWRAGIAEFIATFLFLY----ITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALY 272          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.287e-20
Identity = 89/294 (30.27%), Postives = 125/294 (42.52%), Query Frame = 3
Query:   48 QPFATPKQEQRLMDEEKKQNPSTWKKILGFE--DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALY 866
            QP  T  Q  +   + K+  P+ +     FE  ++ S   WRA +AE + T + ++    I + ++    ++PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K              N +AH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HWVFW GP I     ALY
Sbjct:   19 QPIGTSAQSDK---DYKEPPPAPF-----FEPGELSSWSFWRAGIAEFIATFLFLY----ITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALY 272          
BLAST of DY304311 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.901e-20
Identity = 88/292 (30.14%), Postives = 123/292 (42.12%), Query Frame = 3
Query:   48 QPFATPKQEQRLMDEEKKQNPSTWKKILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALY 866
            QP  T  Q     D++ K+ P     +    ++ S   WRA +AE + T + ++    I + ++    ++PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K              N IAH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    + WD HWVFW GP I     ALY
Sbjct:   19 QPIGTSAQS----DKDYKEPPPA--PLFEPGELASWSFWRAGIAEFIATFLFLY----ITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALY 272          
The following BLAST results are available for this feature:
BLAST of DY304311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
AQP4_RAT7.109e-2230.86Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_BOVIN7.109e-2230.47Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP4_NOTAL9.284e-2230.47Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_HUMAN2.068e-2130.08Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_MOUSE2.701e-2129.53Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME3.528e-2130.08Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
PIP26_ORYSJ1.027e-2031.47Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP11_VICFA2.287e-2030.27Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.287e-2030.27Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ARATH3.901e-2030.14Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YF14RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304311 ID=DY304311; Name=DY304311; organism=Citrus clementina; type=EST; length=1305bp
CGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCAG
CCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGAA
ACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTTT
CTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGTG
CTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACAC
AAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACAA
TCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATTA
GTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAGC
CATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCGC
TGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGGC
TGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCGG
CTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTGT
TCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGCT
CTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTCT
GGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCTG
GGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCAT
CTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCGT
GGCATTTGCTTTGTACACTAAGGTCTTTCCAAGTCAGAATTTGCACACCA
TCCAGTGATGTAGCCTTGATTTTCAATCACCCTTATTGGCTTCCTAGGGA
TAAATTGAAGGGGGTTTCCTGGTTTTAAGGGAATTAAAAAGTTGAAAATA
CCTATTGAAAATATAATTTTATTGGTCTCAAAAAAAAAAAAGAGAAAAAA
ATCAAAAAAGAAAAAGGAAATAACAAAAGAAATCAAAAAATAAAATAATG
GGGGGCGCCCCCGCCGTGAAAATTTCCCCCCCTGAGGGGGCCCCCACGGC
GACACCCGCGCCCCCCACCGCCTTTTTCTGTGAAACAATATGGGGTCCCC
CCATAAAGGGGGTGGCCTACAATTATTTAAAAACCCAATCAAGGACACCA
CGCGGCCCGCCGCCCCCTTTTTTTTCAATAACACCACCCCCTTCTTTTTC
GCCCC
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