DY304312

Overview
NameDY304312
Unique NameDY304312
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1258
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304312 vs. ExPASy Swiss-Prot
Match: GP107_HUMAN (Protein GPR107 OS=Homo sapiens GN=GPR107 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 4.530e-26
Identity = 65/170 (38.24%), Postives = 96/170 (56.47%), Query Frame = 2
Query:  482 YSLFFANCV----PETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPFQVLGNVTPVVI 976
            YSL+F  C+    P  + + ++  E+   + D    YLSAG   LP L+   +  +     IWI+I    +  V +IH +M  L   K+L+L+  A D HY+   G P  GW V++YI   ++  LLF  I LIGTGW+F+K  L +++KK+ MIVIP QVL NV  ++I
Sbjct:  221 YSLYFHKCLGKELPSDKFTFSLDIEITEKNPDS---YLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIII 387          
BLAST of DY304312 vs. ExPASy Swiss-Prot
Match: GP107_MOUSE (Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.248e-25
Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = 2
Query:  482 YSLFFANCV-----PETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPFQVLGNVTPVVI 976
            YSL+F  C      P  Q S ++   +          YLSAG   LP L+   ++ +     IWI+I    +  V +IH +M  L   K+L+L+  A D HY+   G P  GW V++YI   ++  LLF  I LIGTGW+F+K  L +++KK+ MIVIP QVL NV  ++I
Sbjct:  219 YSLYFHKCSGNNVKPGEQASFSLNIAI---TEKNPNSYLSAGEIPLPKLYVSMALFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIII 386          
BLAST of DY304312 vs. ExPASy Swiss-Prot
Match: GP108_HUMAN (Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 8.275e-20
Identity = 59/170 (34.71%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  479 EYSLFFANC---VPETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPFQVLGNVTPVVI 976
            +YSL F NC   VP  +   ++   +   + DG   +LSA    L  L+   S  ++     W+ I   N  SV +IH +M  L   K+++L+  + + +++   G P  G  V++YI   ++  LLF  I LIG+GW+F+K  L ++EKKV  IVIP QVL NV  ++I
Sbjct:  219 QYSLNFHNCNNSVPGKEHPFDITVMIREKNPDG---FLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLMAALAFTKSISLLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWAFIKYVLSDKEKKVFGIVIPMQVLANVAYIII 385          
BLAST of DY304312 vs. ExPASy Swiss-Prot
Match: GP108_BOVIN (Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.005e-19
Identity = 57/170 (33.53%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  479 EYSLFFANC---VPETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPFQVLGNVTPVVI 976
            +Y+L F NC   VP  +   ++   +   + +G   YLSA    L  L+   S  ++G    W+ I   N  +V +IH +M  L   K+++L+  + + +++   G P  G  V+ YI   ++  LLF  I LIG+GW+F+K  L ++EKK+  IVIP QVL NV  +V+
Sbjct:  224 QYNLNFHNCDNSVPGREQPFDITVMIREKNPEG---YLSAAEIPLFKLYMVMSACFLGAGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYVLSDKEKKIFGIVIPLQVLANVAYIVM 390          
BLAST of DY304312 vs. ExPASy Swiss-Prot
Match: GP108_RAT (Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.561e-18
Identity = 56/170 (32.94%), Postives = 91/170 (53.53%), Query Frame = 2
Query:  479 EYSLFFANC---VPETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPFQVLGNVTPVVI 976
            +YSL F NC   +P  +   ++   +   + +G   +LSA    L  L+   S  ++     W+ +   N  SV +IH +M  L   K+++L+  + + +++   G P  G  V+ YI   ++  LLF  I LIG+GW+F+K  L ++EKK+  IVIP QVL NV  +VI
Sbjct:  252 QYSLNFHNCYNTIPGQEQPFDLTVMIREKNPEG---FLSAAEIPLFKLYLIMSACFLAAGIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVI 418          
BLAST of DY304312 vs. ExPASy Swiss-Prot
Match: GP108_MOUSE (Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.561e-18
Identity = 56/170 (32.94%), Postives = 91/170 (53.53%), Query Frame = 2
Query:  479 EYSLFFANC---VPETQVSMNVKTEVYNLDRDGSRDYLSAGLTQLPSLFFFFSVLYIGFFGIWIYICLTNKRSVHRIHLVMGILLIMKALNLICAAEDKHYVKVTGTP-HGWDVLFYIFQFIRVVLLFTVIVLIGTGWSFLKPFLQEREKKVLMIVIPFQVLGNVTPVVI 976
            +YSL F NC   +P  +   ++   +   + +G   +LSA    L  L+   S  ++     W+ +   N  SV +IH +M  L   K+++L+  + + +++   G P  G  V+ YI   ++  LLF  I LIG+GW+F+K  L ++EKK+  IVIP QVL NV  +VI
Sbjct:  245 QYSLNFHNCHNSIPGQEQPFDLTVMIREKNPEG---FLSAAEIPLFKLYLIMSACFLAADIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVI 411          
The following BLAST results are available for this feature:
BLAST of DY304312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GP107_HUMAN4.530e-2638.24Protein GPR107 OS=Homo sapiens GN=GPR107 PE=2 SV=1[more]
GP107_MOUSE2.248e-2538.01Protein GPR107 OS=Mus musculus GN=Gpr107 PE=2 SV=2[more]
GP108_HUMAN8.275e-2034.71Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=2[more]
GP108_BOVIN7.005e-1933.53Protein GPR108 OS=Bos taurus GN=GPR108 PE=2 SV=1[more]
GP108_RAT1.561e-1832.94Protein GPR108 OS=Rattus norvegicus GN=Gpr108 PE=2... [more]
GP108_MOUSE1.561e-1832.94Protein GPR108 OS=Mus musculus GN=Gpr108 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ8YF15RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304312 ID=DY304312; Name=DY304312; organism=Citrus clementina; type=EST; length=1258bp
ATTCCTCACACCCCTCCTTGCATTTTTAACACTAGATCGCCTTCACAACA
ATTCTCCCGCGGACTTAACCCCACCGGCCAAAATGGCGAAAATACCCTTA
CTCCTCCCACTCTCCGTCCTCCTCCTCTCTCTCCTCTCCCTCTCCACCGC
CGAGATCAAATCCCTAACAATCACGGCCGACTCCCGCCCGATGATCCTCT
TTGAAAAATTCGGATTCACTCACACCGGCCACGTCAACATCTCCGTCAGC
TCCGTCTCAGTCGCCTCCTCCTCCGCTGCTCCTAACCCTAACCCTTCCCG
CCTTGGCTTCTTCCTCCTCTCCGAAGAATCCCTCCTCCAAGTCCTCGTCG
AGATCCAACAAAACCCTAACTTCTGTGTCCTCGATTCTCATTACATTCTC
CGTCTGTTCAACTTCCGCGAGCTCTCCCCGCCGCCGCACTCTCGCTTCGA
ACAATCATACCCGGTCACCGCTCCCAATGAGTACTCCCTCTTCTTCGCCA
ATTGCGTGCCCGAGACTCAGGTCTCCATGAACGTCAAGACCGAAGTCTAC
AATTTAGACCGGGATGGTTCGCGGGATTACCTCTCCGCCGGTCTGACTCA
GTTACCTTCGTTGTTTTTCTTCTTCTCGGTTTTGTACATCGGCTTTTTCG
GAATCTGGATCTACATTTGCTTGACGAATAAGCGATCCGTTCATCGGATT
CATTTGGTGATGGGGATTTTGCTCATAATGAAAGCTTTGAACTTGATTTG
CGCAGCCGAGGATAAGCATTACGTGAAAGTCACGGGGACGCCGCACGGAT
GGGACGTTTTGTTTTACATATTCCAGTTTATTCGTGTCGTTTTGCTCTTC
ACGGTGATCGTTTTGATCGGGACCGGGTGGTCGTTTTTAAAGCCGTTTTT
GCAAGAGAGGGAGAAGAAGGTGTTGATGATTGTGATTCCGTTTCAAGTTC
TGGGCAACGTTACACCAGTTGTGATTGGGTGAAACTGGGCCCTTTTATAA
AGGATTTGGTGGAATTGAAATCAGGGTTTTTTTGTTTGGTGAATTTTATT
TTGGCGTTTGTGCAAATTTTTTTCCCCAATTCGGTTGGTTCATTTTGGCC
CCTTTGAAAAAAAAGCTCAAAAAAACTGAACCAGAAAGGGCGGCAGAAGG
GATATTTTGCCCAAACCGCGGACTCTTTTTTTTAAGGGCGCCTTTTTTTT
CTCTATTTTTGTTTTTGTATTTTTGGTTTTTTTCCTTTTGTTTTTCTTCT
TTCCTCCC
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