DY304314

Overview
NameDY304314
Unique NameDY304314
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1268
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK2A_MAIZE (Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 6.945e-83
Identity = 148/196 (75.51%), Postives = 161/196 (82.14%), Query Frame = 1 
Query:  382 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            SKARVY+D+NV+RP+EYWDYE+LTVQWGEQDDYEVVRKVGRGKYSEVFEG++  +NE                     LQNLCGGPNI+KLLDIVRDQ SKTPSLIFE+VNNTDFKVLYPTL+DYD+RYYIYELLKALDYCHSQGIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPGK          FKGPEL
Sbjct:    2 SKARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 2.234e-81
Identity = 144/196 (73.47%), Postives = 160/196 (81.63%), Query Frame = 1 
Query:  382 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            SKARVY+D+NV+RP++YWDYESL VQWGEQDDYEVVRKVGRGKYSEVFEG++  +NE                     LQNLCGGPNI+KLLD+VRDQ SKTPSLIFE+VN+TDFKVLYPTL+DYD+RYYIYELLKALD+CHSQGIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPGK          FKGPEL
Sbjct:    2 SKARVYTDVNVIRPKDYWDYESLNVQWGEQDDYEVVRKVGRGKYSEVFEGINMNNNEKCIIKILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK21_ARATH (Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 5.503e-80
Identity = 142/196 (72.45%), Postives = 158/196 (80.61%), Query Frame = 1 
Query:  382 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            SKARVY+++NV+RP++YWDYESL VQWGEQDDYEVVRKVGRGKYSEVFEG++    E                     LQNLCGGPNI+KLLD+VRDQ SKTPSLIFE+VN+TDFKVLYPTL+DYD+RYYIYELLKALD+CHSQGIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPGK          FKGPEL
Sbjct:    2 SKARVYTEVNVIRPKDYWDYESLIVQWGEQDDYEVVRKVGRGKYSEVFEGINVNSKEKCIIKILKPVKKKKIRREIKILQNLCGGPNIVKLLDVVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK23_ARATH (Probable casein kinase II subunit alpha OS=Arabidopsis thaliana GN=At2g23080 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 3.020e-78
Identity = 141/196 (71.94%), Postives = 154/196 (78.57%), Query Frame = 1 
Query:  382 SKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            SKARVY+D+NVVRP+EYWDYESL VQWG QDDYEVVRKVGRGKYSEVFEG +   NE                     LQNLCGGPNI+KL DIVRD+ SKTPSL+FE VN+ DFKVLYPTL+DYD+RYYIYELLKALD+CHSQGIMHRDVKPHNVMI+H+ RKLRLIDWGLAEFYHPGK          FKGPEL
Sbjct:    2 SKARVYTDVNVVRPKEYWDYESLVVQWGHQDDYEVVRKVGRGKYSEVFEGKNVNTNERCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLYDIVRDEHSKTPSLVFEFVNSVDFKVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHQLRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK21_RAT (Casein kinase II subunit alpha OS=Rattus norvegicus GN=Csnk2a1 PE=1 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 7.204e-72
Identity = 128/197 (64.97%), Postives = 150/197 (76.14%), Query Frame = 1 
Query:  379 PSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            PS+ARVY+D+N  RPREYWDYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPG+          FKGPEL
Sbjct:    6 PSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK21_MOUSE (Casein kinase II subunit alpha OS=Mus musculus GN=Csnk2a1 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 7.204e-72
Identity = 128/197 (64.97%), Postives = 150/197 (76.14%), Query Frame = 1 
Query:  379 PSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            PS+ARVY+D+N  RPREYWDYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPG+          FKGPEL
Sbjct:    6 PSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK21_HUMAN (Casein kinase II subunit alpha OS=Homo sapiens GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 7.204e-72
Identity = 128/197 (64.97%), Postives = 150/197 (76.14%), Query Frame = 1 
Query:  379 PSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            PS+ARVY+D+N  RPREYWDYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPG+          FKGPEL
Sbjct:    6 PSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK21_CHICK (Casein kinase II subunit alpha OS=Gallus gallus GN=CSNK2A1 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 7.204e-72
Identity = 128/197 (64.97%), Postives = 150/197 (76.14%), Query Frame = 1 
Query:  379 PSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            PS+ARVY+D+N  RPREYWDYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPG+          FKGPEL
Sbjct:    6 PSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK21_BOVIN (Casein kinase II subunit alpha OS=Bos taurus GN=CSNK2A1 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 7.204e-72
Identity = 128/197 (64.97%), Postives = 150/197 (76.14%), Query Frame = 1 
Query:  379 PSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            PS+ARVY+D+N  RPREYWDYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPG+          FKGPEL
Sbjct:    6 PSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
[Close]
BLAST of DY304314 vs. ExPASy Swiss-Prot
Match: CSK21_XENLA (Casein kinase II subunit alpha OS=Xenopus laevis GN=csnk2a1 PE=2 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 1.605e-71
Identity = 127/197 (64.47%), Postives = 150/197 (76.14%), Query Frame = 1 
Query:  379 PSKARVYSDINVVRPREYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEXXXXXXXXXXXXXXXXXXXXXLQNLCGGPNIIKLLDIVRDQQSKTPSLIFEHVNNTDFKVLYPTLSDYDVRYYIYELLKALDYCHSQGIMHRDVKPHNVMIEHEQRKLRLIDWGLAEFYHPGKNI------INFKGPEL 951
            PS+ARVY+D+N  RPR+YWDYES  V+WG QDDY++VRK+GRGKYSEVFE ++ T+NE                     L+NL GGPNII L DIV+D  S+TP+L+FEHVNNTDFK LY TL+DYD+R+Y+YE+LKALDYCHS GIMHRDVKPHNVMI+HE RKLRLIDWGLAEFYHPG+          FKGPEL
Sbjct:    6 PSRARVYTDVNTHRPRDYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
The following BLAST results are available for this feature:
BLAST of DY304314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CSK2A_MAIZE6.945e-8375.51Casein kinase II subunit alpha OS=Zea mays GN=ACK2... [more]
CSK22_ARATH2.234e-8173.47Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
CSK21_ARATH5.503e-8072.45Casein kinase II subunit alpha-1 OS=Arabidopsis th... [more]
CSK23_ARATH3.020e-7871.94Probable casein kinase II subunit alpha OS=Arabido... [more]
CSK21_RAT7.204e-7264.97Casein kinase II subunit alpha OS=Rattus norvegicu... [more]
CSK21_MOUSE7.204e-7264.97Casein kinase II subunit alpha OS=Mus musculus GN=... [more]
CSK21_HUMAN7.204e-7264.97Casein kinase II subunit alpha OS=Homo sapiens GN=... [more]
CSK21_CHICK7.204e-7264.97Casein kinase II subunit alpha OS=Gallus gallus GN... [more]
CSK21_BOVIN7.204e-7264.97Casein kinase II subunit alpha OS=Bos taurus GN=CS... [more]
CSK21_XENLA1.605e-7164.47Casein kinase II subunit alpha OS=Xenopus laevis G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAQ8YF17RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304314 ID=DY304314; Name=DY304314; organism=Citrus clementina; type=EST; length=1268bp
AAAAAAACAATAAACATGATTGAAATAAAAATCGATTCCCCGTTCCGGCT
AACACTCTTTTTGGGTAAATAGATGGCCATAAGGCCTTTCCAGTTCACAA
TCCATCGCAACAACTACAAAAACACAACTCTCTTTTCATCTTTCTTTGCC
ATTTCATCAAACACATCATCGTCAAGAACAACATCGGTGTCAAAGATTCT
CTTTTCTCCATTATCTCAATCTTCTCGTATATTCACCCCTTTCGGCACTC
TTCGCGGACTCGCCTCCAGCGCGTCTCTATCCCACGCGCGACACCAACAT
CAACGGTTAAGGCAGTTGGCCACGCCGCCGGACACGCTGGCTCAAAAGAT
CGGAAAATCGGTTCGGCGCTCAGGCGCGCCCTCCAAAGCTAGGGTTTATT
CCGATATTAATGTGGTTCGCCCCAGAGAGTACTGGGACTACGAGTCCCTC
ACCGTTCAGTGGGGGGAGCAGGATGATTACGAGGTGGTGAGAAAGGTTGG
GAGGGGGAAATATAGTGAAGTGTTTGAAGGCGTGCACTGCACTGATAATG
AAAAGTGTATTATTAAGATTCTTAAGCCTGTTAAGAAGAAGAAGATTAAG
AGGGAGATAAAAATACTTCAGAATCTTTGTGGTGGACCGAATATTATCAA
GTTGCTTGATATTGTACGAGACCAGCAATCAAAGACCCCAAGTCTTATAT
TTGAACATGTGAATAATACAGATTTTAAAGTGCTTTATCCAACACTCTCG
GACTATGATGTTCGGTATTACATCTATGAACTTCTAAAGGCATTGGATTA
CTGCCACTCACAAGGCATAATGCATCGAGATGTGAAGCCCCATAATGTGA
TGATTGAACATGAGCAAAGGAAACTTCGTCTTATAGATTGGGGTCTTGCA
GAGTTTTATCATCCTGGCAAAAATATAATAAACTTTAAAGGTCCTGAGCT
TTCTGGTTGAACCTGCAGAATATGATTAATTCTTTAAAACTTAGGAAGTC
CTGGGTTTGTAGGTTTCCTGGAAATGATATTTCCTAAAGGAACCCTTTCT
TCCTTGGGGCCTTAAAAAATTTAGAAACATTTTGGTCCCAAATTGGGCAA
AGGGGCTTGGGGGAACAAATAAAATTAAAAAATCATAAACCTGAAAAAAA
TAAAACAAAAAAAAAAAAGCCTAAAAATCCCCCCCCTTTTTGGCCCCCCC
CCTCCCTGTGGGGGGAAAAAAGGGCAAAACACCCCGGGGAAAAAAACCCC
AAAGGGGGTCCCAAAAAA
back to top