DY304318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.651e-88 Identity = 105/151 (69.54%), Postives = 114/151 (75.50%), Query Frame = 3 Query: 282 LKQMSHLDNIPSTPGKFKMDKSPYFNRLRFHSSLAKLTFWSXXXXXXXXXXXXRSP-SSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARRALLERSGI 731 +KQMSHLD+IPSTPGKFK PYF+R R+ SS+AKL FWS RSP SSNP ADPSRRSLRTY WGGPA+EK G SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLK+AR+ALLERSG+ Sbjct: 1 MKQMSHLDDIPSTPGKFK----PYFHRTRWQSSVAKLAFWSLVFVGLIFIFFYRSPVSSNP---ADPSRRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGV 144 HSP 2 Score: 149.443 bits (376), Expect = 7.651e-88 Identity = 83/125 (66.40%), Postives = 94/125 (75.20%), Query Frame = 2 Query: 731 FIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFNGKKGT*PARRSLMAAT*KNPGKKMGQNL*PPFKGIYLLN 1105 F+VEGDIND ALLKKLF+VV FTHVMHLAAQAGVRYAM+NP+SYVHSNIAG V+LLEV K ANPQPAI WA +SVYG NTKVPF+ K T SL AAT KK G+ + + IY L+ Sbjct: 145 FVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRT-DQPASLYAAT-----KKAGEEIAHTYNHIYGLS 263
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.160e-86 Identity = 102/149 (68.46%), Postives = 113/149 (75.84%), Query Frame = 3 Query: 291 MSHLDNIPSTPGKFKM-DKSPYF-NRLRFHSSLAKLTFWSXXXXXXXXXXXXRSPSSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARRALLERSGI 731 MSHLD+IPSTPGKFKM DKSP+F +R R+ SS+AKL FWS RSP SNP D SRRSLRTY WGGPA+EK NG+SVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYD SLK++R+ALLERSG+ Sbjct: 1 MSHLDDIPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNP----DSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGV 145 HSP 2 Score: 149.443 bits (376), Expect = 3.160e-86 Identity = 83/125 (66.40%), Postives = 94/125 (75.20%), Query Frame = 2 Query: 731 FIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFNGKKGT*PARRSLMAAT*KNPGKKMGQNL*PPFKGIYLLN 1105 FIVEGDIND++LLKKLF+VV FTHVMHLAAQAGVRYAM+NP SYVHSNIAG V+LLEV K ANPQPAI WA +SVYG NTKVPF+ K T SL AAT KK G+ + + IY L+ Sbjct: 146 FIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRT-DQPASLYAAT-----KKAGEEIAHTYNHIYGLS 264
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 4.129e-83 Identity = 100/150 (66.67%), Postives = 111/150 (74.00%), Query Frame = 3 Query: 291 MSHLDNIPSTPGKFKMDKSPYFNRLRFHSSLAKLTFWSXXXXXXXXXXXXRSPSS-NPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXX--NGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARRALLERSGI 731 MS LD+IPS+PGKFKM+KS Y +RLRF SSL K F+S RSP S NP +DPSRRSLRT +GGPA+EK NGI+VLVTGAAGFVGTHVSAALKRRGDGV+GLDNFNDYYDPSLK+ARRALLERSGI Sbjct: 1 MSRLDDIPSSPGKFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPSSPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGI 150 HSP 2 Score: 145.976 bits (367), Expect = 4.129e-83 Identity = 80/125 (64.00%), Postives = 93/125 (74.40%), Query Frame = 2 Query: 731 FIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFNGKKGT*PARRSLMAAT*KNPGKKMGQNL*PPFKGIYLLN 1105 FIVEGDIND+ LL+KLF +VSFTHVMHLAAQAGVRYAM+NP+SYVHSNIAG V+LLE+ K NPQPAI WA +SVYG NTKVPF+ K T SL AAT KK G+ + + IY L+ Sbjct: 151 FIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKT-DQPASLYAAT-----KKAGEEIAHTYNHIYGLS 269
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.894e-69 Identity = 81/125 (64.80%), Postives = 92/125 (73.60%), Query Frame = 2 Query: 731 FIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFNGKKGT*PARRSLMAAT*KNPGKKMGQNL*PPFKGIYLLN 1105 F+VEGDIND LL+KLFDVV FTHVMHLAAQAGVRYAMQNP SYV+SNIAG V+LLEV K ANPQPAI WA +SVYG N+KVPF+ K T SL AAT KK G+ + + IY L+ Sbjct: 150 FVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRT-DQPASLYAAT-----KKAGEGIAHTYNHIYGLS 268 HSP 2 Score: 138.658 bits (348), Expect = 4.894e-69 Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 3 Query: 291 MSHLDNIPSTPGKFKMDKSPYFNRLRFHS--SLAKLTFWSXXXXXXXXXXXXRSPSSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARRALLERSGI 731 MSHLD++PSTPGK+K DK P + L H L+KLT W+ SP +P S+ +GG +EK G++VLVTGA+GFVGTHVS AL+RRGDGVLGLDNFN YYDP LK+AR+ LLERSG+ Sbjct: 1 MSHLDDLPSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPSRRNLNDSSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGV 149
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.350e-53 Identity = 75/125 (60.00%), Postives = 90/125 (72.00%), Query Frame = 2 Query: 731 FIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFNGKKGT*PARRSLMAAT*KNPGKKMGQNL*PPFKGIYLLN 1105 FIVEGD+ND LL+KLFDVV FTH++HLAAQAGVRYAM+NP SY+ SNIAG V+LLEV K ANPQPAI WA +SVYG NT+ PF+ + T SL AAT KK G+ + + IY L+ Sbjct: 166 FIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSEEHRT-DQPASLYAAT-----KKAGEEIAHTYNHIYGLS 284 HSP 2 Score: 96.6709 bits (239), Expect = 1.350e-53 Identity = 53/97 (54.64%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 441 RSPSSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARRALLERSGI 731 RS S L S+ S S+ GG A+EK +G+SVLVTGAAGFVG+H S AL++RGDGVLG DNFNDYYDPSLK+AR+ LLE+ + Sbjct: 74 RSFLSTGLFSSSSSSSSI-----GGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQV 165
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 6.041e-34 Identity = 79/138 (57.25%), Postives = 96/138 (69.57%), Query Frame = 2 Query: 683 PFFEESKASAFGAKWNFIVEGDINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFNGKKGT*PARRSLMAAT*KNPGKKMGQNL*PPFKGIY 1096 P + ++ S ++ F+VEGD+ND LL KLFDVV+FTHVMHLAAQAGVRYA++NP SYVHSNIAGLV+LLE+ K ANPQPAI WA +SVYG N KVPF+ T SL AAT KK G+ + + IY Sbjct: 126 PSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRT-DQPASLYAAT-----KKAGEEITHTYNHIY 257 HSP 2 Score: 110.538 bits (275), Expect = 2.154e-23 Identity = 67/142 (47.18%), Postives = 82/142 (57.75%), Query Frame = 3 Query: 312 PSTPGKFKMDKSPYFNRL--RFHSSLAKLTFWSXXXXXXXXXXXXRSPSSNPLPSADPSRRSLRTYDWGGPAFEKXXXXXXXXXXXNGISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARRALLERSGI 731 PSTPGKFK+D+S NR R +S + + W+ + S S S T WGG +EK GISVLVTGA GFVG+HVS AL++RGDGV+GLDNFN+YYDPSLK+ARR+LL GI Sbjct: 10 PSTPGKFKIDRS---NRQLHRCFASTSTMFLWALFLIAL-------TASYLSFQSFVDSGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGI 141
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 6.152e-19 Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 749 INDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPF 985 + D A L + ++ ++HLAAQAGVRY+++NP +YV +N+ G ++LE+ K P+ + A +S+YG N K+PF Sbjct: 62 LEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPKHLM-LASTSSIYGANEKIPF 139 HSP 2 Score: 51.9878 bits (123), Expect = 6.152e-19 Identity = 24/49 (48.98%), Postives = 32/49 (65.31%), Query Frame = 3 Query: 579 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARRALLERS 725 L+TG AGF+G HV+ L G V+G D YYD +LK+ R A+L+RS Sbjct: 4 LITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRS 52
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.288e-18 Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 803 VMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFN 988 V++LAAQAGVRY+++NP +Y+ SNI G +++LE + N Q I +A +SVYG NT PF+ Sbjct: 79 VVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQNLI-YASSSSVYGANTSKPFS 139 HSP 2 Score: 51.9878 bits (123), Expect = 2.288e-18 Identity = 21/45 (46.67%), Postives = 34/45 (75.56%), Query Frame = 3 Query: 570 ISVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKAR 704 + +L+TG AGF+G+H++ L ++G V+G+D+ NDYY SLK+ R Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDR 45
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.438e-17 Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 3 Query: 579 LVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKKARRALLERSGILSLKV 746 LVTGAAGF+G HVS L G V+G+DN NDYYD SLK+AR LL + G K+ Sbjct: 4 LVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKI 59 HSP 2 Score: 48.1358 bits (113), Expect = 1.438e-17 Identity = 28/81 (34.57%), Postives = 45/81 (55.56%), Query Frame = 2 Query: 746 DINDMALLKKLFDVVSFTHVMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFN 988 D+ D + LF F V + VRY+++NP++Y SN+ G +++LE G N + +A +SVYG N K+PF+ Sbjct: 60 DLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILE-GCRHNKIQHLLYASSSSVYGLNRKMPFS 139
BLAST of DY304318 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 7.358e-16 Identity = 26/62 (41.94%), Postives = 43/62 (69.35%), Query Frame = 2 Query: 803 VMHLAAQAGVRYAMQNPNSYVHSNIAGLVSLLEVGKIANPQPAIGWAKFNSVYGPNTKVPFN 988 ++HL AQAGVRY++QNP +Y+ SN G +++ E + + + + +A +SVYG N K+PF+ Sbjct: 85 IVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDIEKVV-YASSSSVYGGNRKIPFS 145 HSP 2 Score: 49.2914 bits (116), Expect = 7.358e-16 Identity = 23/51 (45.10%), Postives = 36/51 (70.59%), Query Frame = 3 Query: 573 SVLVTGAAGFVGTHVSAALKRRGDG--VLGLDNFNDYYDPSLKKARRALLE 719 ++LVTG+AGF+G H+S L + V+G+DN N+YY+P LK+ R +L+ Sbjct: 5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILK 55 The following BLAST results are available for this feature:
BLAST of DY304318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304318 ID=DY304318; Name=DY304318; organism=Citrus clementina; type=EST; length=1281bpback to top |