DY304329

Overview
NameDY304329
Unique NameDY304329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1268
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSI (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. indica GN=OsI_011697 PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 3.279e-24
Identity = 70/163 (42.94%), Postives = 99/163 (60.74%), Query Frame = 1
Query:  592 FLVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWVSSN--APRESVTLTSTRINAAGNVAIGGL-RD*RGPVHFCPS*WAKNPNRP-LPAQIGFPKKMGSLVWVCRKQVRASF 1068
            FL +VPIL  HV  ++  V  E AA +YEF IRQ V+ RTV VS S+DCP+FDL+LL++G+   VAS++PN+P L+    WV +++ +   P E +T T   IN+A N+A+     D    V+F  S  A+ P+ P +PA++  P   G LVW   K   ASF
Sbjct:  121 FLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGAEGPDAPSIPARMVQPTD-GKLVWFLDK-ASASF 281          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 9.540e-24
Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 1
Query:  592 FLVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWVSSN--APRESVTLTSTRINAAGNVAIGGL-RD*RGPVHFCPS*WAKNPNRP-LPAQIGFPKKMGSLVWVCRKQVRASF 1068
            FL +VPIL  HV  ++  V  E AA +YEF IRQ V+ RTV VS S+DCP+FDL+LL++G+   VAS++PN+P L+    WV +++ +   P E +T T   IN+A N+A+     D    V+F  S   + P+ P +PA++  P   G LVW   K   ASF
Sbjct:  121 FLSKVPILNGHVYSINDNVTVEDAATDYEFVIRQLVKIRTVGVSESNDCPKFDLILLSIGSDGHVASLFPNHPALELKDDWVTYITDSPVPPPERITFTLPVINSASNIAVVATGEDKAKAVYFAISDGTEGPDAPSIPARMVQPTD-GKLVWFLDK-ASASF 281          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.246e-23
Identity = 68/163 (41.72%), Postives = 94/163 (57.67%), Query Frame = 1
Query:  592 FLVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWV--SSNAPRESVTLTSTRINAAGNVAIGGLRD*RG-PVHFCPS*WAKNPNRP--LPAQIGFPKKMGSLVWVCRKQVRAS 1065
            FL +VPIL  HV  ++     E AA +YEF IRQ V+ RT+ VS S+DCP+FDL+LL++G+   VAS++PN+P L+    W+ ++  S   P E +T T   IN+A N+AI    D +   VH   S  A  P  P  LPA++  P   G LVW   K   +S
Sbjct:  104 FLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTD-GKLVWFLDKSAASS 265          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.246e-23
Identity = 68/163 (41.72%), Postives = 94/163 (57.67%), Query Frame = 1
Query:  592 FLVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWV--SSNAPRESVTLTSTRINAAGNVAIGGLRD*RG-PVHFCPS*WAKNPNRP--LPAQIGFPKKMGSLVWVCRKQVRAS 1065
            FL +VPIL  HV  ++     E AA +YEF IRQ V+ RT+ VS S+DCP+FDL+LL++G+   VAS++PN+P L+    W+ ++  S   P E +T T   IN+A N+AI    D +   VH   S  A  P  P  LPA++  P   G LVW   K   +S
Sbjct:  104 FLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTD-GKLVWFLDKSAASS 265          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.426e-19
Identity = 58/157 (36.94%), Postives = 87/157 (55.41%), Query Frame = 1
Query:  595 LVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWV--SSNAPRESVTLTSTRINAAGNVAIGGLRD*R-GPVHFC-PS*WAKNPNRPLPAQIGFPKKMGSLVWVCRKQ 1053
            L +V + P H+  ++  V  E AA  YEF+IRQ VR RTV  S +SD P+FDL+LL +G+   VAS++PN+P L+    WV ++  S   P E +T T   IN+A NV +    + +   +H         + +  LPA++  P   G+L+W   KQ
Sbjct:  101 LSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSPRFDLILLGMGSDGHVASLFPNHPALEVKDDWVTFLTDSHKPPPERITFTLPVINSAANVVVVATGESKANAIHLAIDDLPLPDSSLSLPARLVHPSN-GNLIWFMDKQ 256          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.688e-12
Identity = 37/111 (33.33%), Postives = 67/111 (60.36%), Query Frame = 1
Query:  592 FLVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWV--SSNAPRESVTLTSTRINAAGNVAI 918
            FL +VPI    V  ++  +  E AA++YE  ++Q V+   + +S S+  P+FD++LL +G    +AS++P +P++ E+ +WV ++  S   P E +T T   IN++  VA+
Sbjct:  162 FLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAM 272          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.688e-12
Identity = 37/111 (33.33%), Postives = 67/111 (60.36%), Query Frame = 1
Query:  592 FLVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWV--SSNAPRESVTLTSTRINAAGNVAI 918
            FL +VPI    V  ++  +  E AA++YE  ++Q V+   + +S S+  P+FD++LL +G    +AS++P +P++ E+ +WV ++  S   P E +T T   IN++  VA+
Sbjct:  162 FLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAM 272          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.879e-12
Identity = 39/111 (35.14%), Postives = 66/111 (59.46%), Query Frame = 1
Query:  592 FLVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWVSSN--APRESVTLTSTRINAAGNVAI 918
            FL +VPI P +V  ++  +  E+AA++YE  ++  V    + VS S+  P+FDL+LL +G    VAS++P + +  E  +WV  +S +   P E +T T   IN++ +VA+
Sbjct:  170 FLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVAL 280          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.158e-11
Identity = 35/110 (31.82%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  595 LVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWV--SSNAPRESVTLTSTRINAAGNVAI 918
            L +VPI  + +  ++  +  E AA+ YE  ++Q V    V +S  +  P+ DL+LL +G    VAS++P +PV+ E+ +WV+++  S   P E +T T   +N++ ++A+
Sbjct:  166 LSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIAL 275          
BLAST of DY304329 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 4.158e-11
Identity = 35/110 (31.82%), Postives = 65/110 (59.09%), Query Frame = 1
Query:  595 LVQVPILPAHVIPVSHGVPGESAANNYEFSIRQQVRKRTVPVSPSSDCPQFDLVLLTLGTRCDVASIYPNNPVLQEDSQWVAWV--SSNAPRESVTLTSTRINAAGNVAI 918
            L +VPI  + +  ++  +  E AA+ YE  ++Q V    V +S  +  P+ DL+LL +G    VAS++P +PV+ E+ +WV+++  S   P E +T T   +N++ ++A+
Sbjct:  166 LSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIAL 275          
The following BLAST results are available for this feature:
BLAST of DY304329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
6PGL1_ORYSI3.279e-2442.94Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL1_ORYSJ9.540e-2442.33Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]
6PGL2_ORYSJ1.246e-2341.72Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL2_ORYSI1.246e-2341.72Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL1_ARATH1.426e-1936.94Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL4_ORYSJ1.688e-1233.33Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI1.688e-1233.33Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH2.879e-1235.14Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ4.158e-1131.82Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI4.158e-1131.82Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ8YG09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304329 ID=DY304329; Name=DY304329; organism=Citrus clementina; type=EST; length=1268bp
CCGTTCTTGAGAACCGTGGACTGGTCAAAATGGCATGTGTTTTGGGCTGA
AGAGAACGTGGTTCCTAAGAGACATCCCGATAGCTTCTACAGACAAGCCC
AGGAAGCATTCATCTCAAAGGTTCTACTGTTATTTATCCACTTATTTACT
CTTCATGCGTTGCTTGCGTCGTTGATTGATAGAAACGGAATGTATGGCTT
TGGTTTTCCCCTTGCATTGCATGCAAATTAGGAGGGTAATGATATAAGCT
TACGTATGCTGTGTCTGTGTCCTAAACCAATCATAGAGAACCGCTGTTCT
GAACAAATTCAATTGTTACTGTAACCACTTAAAAATTCTGGAAATTGACT
AGTGCATAGTGCAAGTATACGTACAGCAATATTAGTATTACAATACCCAC
CGGAAAAGTCTTCGGTGCTCTAACTAAGCTAATAATAATGAGAGAGAGCA
ACAGATTTGCTTTACTCCGTAGTGGTCATTGAGTCATCAAAAACTTGCTG
ACACGTATTGAACTGTTGTAAATATTTGTCTTAGGGCCCATTAAACTTGG
ACGGCCCACCACCGACCTTTGACAATCTATCATCATTTCTTTTCTTGGTG
CAGGTACCCATACTGCCGGCTCACGTTATTCCTGTGAGCCACGGCGTACC
GGGAGAATCAGCTGCCAATAACTACGAGTTCTCCATCAGGCAACAGGTTA
GAAAGCGGACGGTTCCTGTTTCTCCATCGAGCGACTGTCCCCAATTCGAC
CTTGTTCTCTTAACTCTGGGGACCCGCTGCGACGTGGCATCTATTTACCC
CAATAACCCGGTCCTCCAGGAGGACTCTCAATGGGTTGCCTGGGTCTCCT
CTAACGCTCCCAGGGAGAGCGTGACACTCACCTCTACCCGTATAAACGCT
GCTGGCAACGTGGCTATTGGTGGCCTCCGGGATTGACGTGGCCCCGTCCA
TTTTTGCCCTTCATGATGGGCCAAAAACCCCAATAGACCCCTCCCAGCCC
AAATTGGGTTCCCCAAAAAAATGGGAAGCCTCGTTTGGGTTTGCCGGAAG
CAAGTGCGGGCTTCCTTTTTTCTCCCCGCGGGCAGGGGGAAACACCTGGC
CCCCTACCTTGAAATTCTCTTAATCCTCTCCTTATTCTCAAAAAAAATTT
AAACGGGGAAAAAGAGGGGAAATTTTTTCCCAAAAAAAAAATAAACCTTT
TTACCCTATTTCTCTCCCTTCTTTTTTTTTTTTAAATTTAAAGGAATATA
ATATTACAAAATAATAAT
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