DY304330

Overview
NameDY304330
Unique NameDY304330
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1311
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5A_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform OS=Arabidopsis thaliana GN=B'ALPHA PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 1.907e-55
Identity = 108/162 (66.67%), Postives = 127/162 (78.40%), Query Frame = 1
Query:  421 MFKKIMKG--RKPSKSDPNDQSLYGF--PQRN-PIANVVVNHSSRAXXXXXXXXXXXXXXVVATPPPMFSIEPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHENTG 891
            MFKKIMKG  RK SK++ ND S+YGF  P R+ P +N++VNH+SR                   PPPM+S+EPLPLFRDV VSERQ+LFLRKLQ+CCFQ DF D++K+ REKEIKRQTLLELVDFIQSG+ K+TE CQEEM+KMIS+NIFRCLPPASHENTG
Sbjct:    1 MFKKIMKGANRKASKAEANDSSMYGFDPPGRSGPGSNMIVNHASRGSLVPSSPNSMAA--ATTQPPPMYSVEPLPLFRDVSVSERQSLFLRKLQICCFQFDFTDTLKNAREKEIKRQTLLELVDFIQSGAGKLTEVCQEEMVKMISVNIFRCLPPASHENTG 160          

HSP 2 Score: 27.7202 bits (60), Expect = 1.907e-55
Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  909 LKKNDPYLEPSWP 947
            L++ +PYLEPSWP
Sbjct:  166 LEEEEPYLEPSWP 178          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5B_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform OS=Arabidopsis thaliana GN=B'BETA PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 5.634e-51
Identity = 117/195 (60.00%), Postives = 136/195 (69.74%), Query Frame = 1
Query:  421 MFKKIMKG--RKPSKSDPNDQSLYGFP----QRNPIANVVVNHSSRAXXXXXXXXXXXXXXVVATPPP--MFSIEPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHENTGPRNC*P*RR---MIPTWNPLGLFGSLVYEV 972
            MFKKIMKG  RKPSKS+ N+ S YG      +  P +NVVV+H+SR               V ATPPP  + S+EPLPLFRDVPVSERQ LFLRKLQ CCF  DF D++K+ R+KEIKRQTLLELVDFIQSGS+KI+E+CQEEMIKMIS+NIFR LPPASHENTG     P      + P+W  L     LVYE+
Sbjct:    1 MFKKIMKGGHRKPSKSEANEPSSYGIGLPDNRSGPGSNVVVSHASRGALVNSSPSP-----VTATPPPPPLGSVEPLPLFRDVPVSERQTLFLRKLQNCCFLFDFTDTIKNARDKEIKRQTLLELVDFIQSGSSKISESCQEEMIKMISVNIFRSLPPASHENTGQEPADPEEEEPYLEPSWPHL----QLVYEL 186          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5E_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform OS=Arabidopsis thaliana GN=B'EPSILON PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.318e-26
Identity = 73/168 (43.45%), Postives = 92/168 (54.76%), Query Frame = 1
Query:  421 MFKKIMK--GRKPSKSDPNDQSLYGFPQRNPIANVVVNHSSRAXXXXXXXXXXXXXXVVATPP-----PMFSIEP----LPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHENTG 891
            MF KI+K   +K +KSD + Q        N   N VV  S                    +P      PMF+  P    LPL +DV  S+R  LF++K  +C    DF+D++   REKEIKRQTLLELVDF+ S S K+ E  Q E+I+M+S NIFRCLPPA HENTG
Sbjct:    1 MFNKIIKLGQKKFNKSDQHHQDNNN-NNNNTSTNTVVRGSRTTTPAPSSVSNGESQTTAQSPSQTPNHPMFTTTPILEVLPLLKDVSSSDRPLLFMKKAHMCSCHCDFSDTLIMPREKEIKRQTLLELVDFLHSSSGKVNETMQSELIRMVSANIFRCLPPAYHENTG 167          

HSP 2 Score: 23.483 bits (49), Expect = 1.318e-26
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  912 KKNDPYLEPSWP 947
            ++ +PYLEP WP
Sbjct:  176 EEEEPYLEPWWP 187          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5G_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform OS=Arabidopsis thaliana GN=B'GAMMA PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 1.708e-23
Identity = 65/158 (41.14%), Postives = 87/158 (55.06%), Query Frame = 1
Query:  445 RKPSKSDPNDQSLYGFPQRNP--IANVVVNHSSRAXXXXXXXXXXXXXXVVATPPPMFS---------IEPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHEN 885
            RKPSKS  ND +  G    N   I N  ++  S+                V  P    S          E LP FRDVP SE+ NLF++KL +CC   DFND  K++REKEIKRQTLLELVD+I + S K+++   +E+ K+  +N+FR  P A+HE+
Sbjct:   11 RKPSKSSHNDSNPNGEGGVNSYYIPNSGISSISKPSSKSSASNSNGANGTVIAPSSTSSNRTNQVNGVYEALPSFRDVPTSEKPNLFIKKLSMCCVVFDFNDPSKNLREKEIKRQTLLELVDYIATVSTKLSDAAMQEIAKVAVVNLFRTFPSANHES 168          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5T_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform OS=Arabidopsis thaliana GN=B'THETA PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.467e-22
Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 1
Query:  619 EPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHEN 885
            E LP F+DVP +E+QNLF+RKL +CC   DF+D  K+V+EK+IKRQTLLELVD++ S + K +E   +E+++M+S+NIFR L P   EN
Sbjct:   71 EALPGFKDVPNAEKQNLFVRKLSLCCVVFDFSDPTKNVKEKDIKRQTLLELVDYVASPNGKFSETVIQEVVRMVSVNIFRTLNPQPREN 159          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5Z_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform OS=Arabidopsis thaliana GN=B'ZETA PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 6.440e-22
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 1
Query:  619 EPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHEN 885
            E LP FRDVP+SE+ NLF+ KL +CC   DF+D  K+++EKEIKRQTLLELVD++ S   K  +   +E+ KM+++N+FR  P A+HE+
Sbjct:  101 EALPSFRDVPISEKPNLFIGKLSMCCVVFDFSDPSKNLKEKEIKRQTLLELVDYVASVGFKFNDVSMQELTKMVAVNLFRTFPSANHES 189          

HSP 2 Score: 20.7866 bits (42), Expect = 6.440e-22
Identity = 6/9 (66.67%), Postives = 8/9 (88.89%), Query Frame = 3
Query:  921 DPYLEPSWP 947
            +P LEP+WP
Sbjct:  201 EPSLEPAWP 209          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5I_ARATH (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform OS=Arabidopsis thaliana GN=B'IOTA PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.015e-20
Identity = 62/183 (33.88%), Postives = 90/183 (49.18%), Query Frame = 1
Query:  421 MFKKIMKGRKPSKSDPNDQSLYGFPQRNPIANVVVNHSSRAXXXXXXXXXXXXXXVVATPPP--MFSIEPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHENTGPRNC*P*RRMIPTWNPLGLFGSLV 963
            MFK+ +  + P KS  +D          P+++ V    +                  A  P   +  IEPL  F+DVP SE+ NLF+ K+ +CC   DF+D  K+  EK++KRQTLLEL+DF+ SGS K TE     M +M ++N+FR  PP    ++G  N        P W  L +   L+
Sbjct:    1 MFKQFLS-KLPRKSSKSDSGELNRSSSGPVSSPVQRSGTSGGGSGPVRSNSGKRMSSAVFPASVVAGIEPLVPFKDVPSSEKLNLFVSKVSLCCVTFDFSDPGKNSIEKDVKRQTLLELLDFVASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSSSGGENDDDEPMFDPAWPHLQIVYDLL 182          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5N_ARATH (Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform OS=Arabidopsis thaliana GN=B'ETA PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.773e-20
Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = 1
Query:  619 EPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHEN 885
            E LP F+DVP +E+QNLF++KL +C    DF D  K+++EK+IKRQTLLELVD++ S + K +E   +E+++M+S NIFR L P   EN
Sbjct:   92 EALPSFKDVPNTEKQNLFIKKLNLCRVVFDFTDPTKNIKEKDIKRQTLLELVDYVNSPNGKFSEVGIQEVVRMVSANIFRTLNPQPREN 180          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5E_MOUSE (Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform OS=Mus musculus GN=Ppp2r5e PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 2.822e-18
Identity = 51/118 (43.22%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  616 IEPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHENTGPRNC*P*RRMIPTWNPLGLFGSLVYE 969
            + PLPL +DVP SE+  LFL+KLQ CC   DF D++  ++ KE KR TL ELVD+I      +TE    E+++M+S NIFR LPP+      P    P   +  +W  L     LVYE
Sbjct:   45 LTPLPLLKDVPTSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSNEFDPEEDEP--TLEASWPHL----QLVYE 156          
BLAST of DY304330 vs. ExPASy Swiss-Prot
Match: 2A5E_RABIT (Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform (Fragment) OS=Oryctolagus cuniculus GN=PPP2R5E PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.814e-18
Identity = 51/118 (43.22%), Postives = 68/118 (57.63%), Query Frame = 1
Query:  616 IEPLPLFRDVPVSERQNLFLRKLQVCCFQLDFNDSMKSVREKEIKRQTLLELVDFIQSGSAKITENCQEEMIKMISINIFRCLPPASHENTGPRNC*P*RRMIPTWNPLGLFGSLVYE 969
            + PLPL +DVP SE+  LFL+KLQ CC   DF D++  ++ KE KR TL ELVD+I      +TE    E+++M+S NIFR LPP+      P    P   +  +W  L     LVYE
Sbjct:   45 LTPLPLLKDVPSSEQPELFLKKLQQCCVIFDFMDTLSDLKMKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSNEFDPEEDEP--TLEASWPHL----QLVYE 156          
The following BLAST results are available for this feature:
BLAST of DY304330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
2A5A_ARATH1.907e-5566.67Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5B_ARATH5.634e-5160.00Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5E_ARATH1.318e-2643.45Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5G_ARATH1.708e-2341.14Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5T_ARATH2.467e-2255.06Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5Z_ARATH6.440e-2252.81Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5I_ARATH3.015e-2033.88Serine/threonine protein phosphatase 2A 57 kDa reg... [more]
2A5N_ARATH8.773e-2051.69Serine/threonine protein phosphatase 2A 59 kDa reg... [more]
2A5E_MOUSE2.822e-1843.22Serine/threonine-protein phosphatase 2A 56 kDa reg... [more]
2A5E_RABIT4.814e-1843.22Serine/threonine-protein phosphatase 2A 56 kDa reg... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YG10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304330 ID=DY304330; Name=DY304330; organism=Citrus clementina; type=EST; length=1311bp
TTTTTTTTTCTGTCGACAGTATTCGTCTCTCTTTCTCTGCCATCGGATTA
ATCATCTCCGTCAGATCAGCTGACCGATATTCCGTTGATCTGACCGCAGA
TGAGTTCCTATTCCGATCAATCAACGGTTACATTTATGCAAAAACCGGTA
CAATTCTTCTCTGATTTCTTTCTCAGATCCGCTCCAATTTGACAGAATCA
AAATCTCATTCAATTCCTTTGCTTCGTCTCTTTCTTTTATTATTATTATC
ATTATTATTATTATTATTATTTCTTCTTCTTCTTATTATTATTATTATTT
TTCCATGCTCACTAATCCATCAAAGCTCATTTTTACCAGCCAATTACAAT
CAAAATCACTATTCAGCGGTCAGGTGTTGTCGCTACTAGTTTTTAAAATT
AGGGTTTTGTTCATACTTCAATGTTTAAGAAAATCATGAAAGGGCGTAAG
CCCTCTAAATCGGATCCTAATGATCAATCTCTTTACGGCTTCCCCCAACG
AAACCCTATCGCTAATGTAGTAGTAAATCACTCTTCTCGGGCCGGGCCGG
GGCTGCCCAGCCCCAATAGTGGTAGCCCCGCTTCGGTGGTGGCCACTCCG
CCGCCTATGTTTAGTATTGAACCGCTGCCGCTGTTTCGAGACGTGCCCGT
ATCTGAGCGCCAGAATTTGTTCCTGCGAAAGCTGCAAGTTTGTTGCTTTC
AGCTGGACTTTAATGACTCTATGAAAAGTGTTCGCGAAAAGGAGATTAAG
AGACAGACGTTACTGGAGCTTGTTGATTTTATTCAATCTGGGTCCGCCAA
AATTACTGAGAATTGTCAAGAGGAGATGATTAAAATGATTTCCATTAACA
TTTTTCGCTGTTTGCCTCCGGCTTCTCATGAGAATACTGGCCCAAGAAAT
TGTTGACCCTGAAGAAGAATGATCCCTACTTGGAACCCTCTTGGCCTCTT
TGGCAGCCTGGTTTATGAAGTGGCTTTTGAAAAATGGAAGTGGCTTCCGA
ATCCAGATAACAAGAATTGGCAAACCGGTAATATTGATTCATTCCTTTTT
TGTGTTGAAATTTGCTGGGATTTTGGTTGGAATTCTGAGGGAACCCCCAA
AAGAAAAAAGAAATTAATTTAAAAAACAAATTTCCTGCCCTCTCGGAATT
TTTGGGGGAAGGGTTCTTATGGGGGGCAAAAGAGCGCCCTCTTTTTTTTA
ATAAAAAGGGGGAAATATTTTATAAAAAAATATTATTTTCCTTTGGGGGG
TTTTTTTTAAATTTTTTTAGAAAAAAAAAAGTGGGAAAAAGGAGGACGCC
ACCACACGGGG
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