DY304344

Overview
NameDY304344
Unique NameDY304344
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1286
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: Y2881_DICDI (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum GN=DDB_G0288155 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.631e-45
Identity = 88/186 (47.31%), Postives = 127/186 (68.28%), Query Frame = 1
Query:  187 VGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEE 744
            +G  ++ TG  L R GC++QG+Y + E+L+RH  L    D AP V + +F+AP+ASIIGDV +G+ SSIWY  VLRGDVNSI +G  T + D ++VH + +   G   PT IGD V +G  +++H  T+  E+F+G G+TL DG VVE++G + AGSL+     I SGE WGG+PAKF+R++T ++
Sbjct:   10 LGEVVKNTGLILHRTGCKMQGDYAYVEKLNRHTRLTAFGDNAPIVGQKSFIAPNASIIGDVVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDRTVVHCSSNGPLGP-KPTQIGDKVYIGPGSIVHAATILGESFIGTGSTLCDGSVVEKNGFLEAGSLLTAGKTIKSGEYWGGSPAKFIRQVTKDD 194          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: UMP7_ARATH (Uncharacterized protein At5g63510, mitochondrial OS=Arabidopsis thaliana GN=At5g63510 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.555e-32
Identity = 72/155 (46.45%), Postives = 100/155 (64.52%), Query Frame = 1
Query:  313 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSAPII 777
            P V  DA+VAP+  + G V V  GSS+W G VLRGD+N I+VG  +N+Q+  +VH A S+ +G    T I   VTVG  ++L  CT+E E  +G  + L++G +VE   ++ AGS+V    RIPSGE+WGGNPA+F+R LT+EE   I + A  I
Sbjct:   66 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAATIIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVVPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAI 220          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: UMP8_ARATH (Uncharacterized protein At3g48680, mitochondrial OS=Arabidopsis thaliana GN=At3g48680 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.691e-32
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 1
Query:  313 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSAPII 777
            P V  DA+VAP+  + G V V  GSS+W G VLRGD+N I+VG  +N+Q+  +VH A S+ +G    T I   VTVG  ++L  CT+E E  +G  + L++G +VE   ++ AGS++    RIPSGE+WGGNPA+F+R LT+EE   I + A  I
Sbjct:   70 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPECIIGQHSILMEGSLVETRSILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAI 224          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: YRDA_SHIFL (Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.656e-31
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 1
Query:  304 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA-KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSAPIIPTW 786
            D  P + +   +  S+ +IGDV++     IW   V+RGDV+ + +G+ TNIQD S++HV  KS+ +    P TIG++VTVGH  +LHGCT+ +   VGMG+ LLDG +VE   M+ AGSLV QN R+ SG ++ G+P K +R L+DEE A +  SA     W
Sbjct:   10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKW 171          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: YRDA_ECOLI (Protein yrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.656e-31
Identity = 72/162 (44.44%), Postives = 103/162 (63.58%), Query Frame = 1
Query:  304 DKAPAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVA-KSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSAPIIPTW 786
            D  P + +   +  S+ +IGDV++     IW   V+RGDV+ + +G+ TNIQD S++HV  KS+ +    P TIG++VTVGH  +LHGCT+ +   VGMG+ LLDG +VE   M+ AGSLV QN R+ SG ++ G+P K +R L+DEE A +  SA     W
Sbjct:   10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKW 171          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: Y304_METJA (Uncharacterized protein MJ0304 OS=Methanocaldococcus jannaschii GN=MJ0304 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 5.327e-30
Identity = 65/150 (43.33%), Postives = 96/150 (64.00%), Query Frame = 1
Query:  319 VDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSA 768
            + K+  +A  A I+GDV +G  SS+WY  V+RGDV+ I +G+ +NIQD  +VH +K        PT IGD V++GH AV+HGC +ED   VGM AT+L+G  +  + ++ A +LV QN  IP   +  G P + +R+LT+EEI  I ++A
Sbjct:    2 ISKNVRIAKGAVIVGDVTIGDYSSVWYNAVIRGDVDKIIIGNYSNIQDCCVVHCSKG------YPTIIGDYVSIGHGAVIHGCRIEDNVLVGMNATILNGAKIGENCIIGANALVTQNKEIPPNSLVLGVPGRVVRELTEEEIKSIKENA 145          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: Y3753_PSEAE (Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa GN=PA3753 PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 9.402e-27
Identity = 56/147 (38.10%), Postives = 95/147 (64.63%), Query Frame = 1
Query:  328 DAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQSA 768
            D+++APSA++IG V++  G+S+W+G VLRGD   I +G  +N+QD S++H           P T+G  VTVGH+A+LHGC+V D + VG+ A +L+G  + ++ ++ A +L+ +   IP G +  G+P K +R+L++ +   +  SA
Sbjct:   15 DSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMHTDMG------YPLTLGKGVTVGHNAMLHGCSVGDYSLVGINAVILNGAKIGKYCIIGANALIPEGKEIPDGSLVMGSPGKVVRELSEPQKKMLEASA 155          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: PAAY_ECOLI (Phenylacetic acid degradation protein paaY OS=Escherichia coli (strain K12) GN=paaY PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.450e-24
Identity = 56/150 (37.33%), Postives = 90/150 (60.00%), Query Frame = 1
Query:  313 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEIAFISQ 762
            P V +++FV P+A +IGDV +G+G  +     LRGD   I V  G NIQDN ++H            T +G++  +GHSA+LHGC +   A VGM A ++DG V+  + +V A + V+    +P+  +  G+PAK +R+L+++E+A+  Q
Sbjct:   11 PVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQ------DTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQ 154          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: YTOA_BACSU (Uncharacterized transferase ytoA OS=Bacillus subtilis GN=ytoA PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.697e-23
Identity = 56/144 (38.89%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  313 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEE 744
            P +   AF+A +A+I GDV +G  SSIW+  V+RGDV    +G+  NIQD S +H + +          I D+ T+GH   LH   +   A +GMG+ +LDG  +     + AGSLV     IP G +  G PAK +R LT+E+
Sbjct:   10 PDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSPNKT------LLIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEED 147          
BLAST of DY304344 vs. ExPASy Swiss-Prot
Match: CAIE_SALTY (Carnitine operon protein caiE OS=Salmonella typhimurium GN=caiE PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.903e-21
Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  313 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLRKLTDEEI 747
            P V  DAFV PSA +IGDV VG G  I     LRGD   + + +G+N+QD  ++H            T + +N  +GH A+LHGC V  +A VGM + ++DG V+    +VAA S V+   +  + ++  G+PA+ LR++TD+E+
Sbjct:   11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLRQVTDQEL 149          
The following BLAST results are available for this feature:
BLAST of DY304344 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
Y2881_DICDI2.631e-4547.31Uncharacterized protein DDB_G0288155 OS=Dictyostel... [more]
UMP7_ARATH2.555e-3246.45Uncharacterized protein At5g63510, mitochondrial O... [more]
UMP8_ARATH5.691e-3245.81Uncharacterized protein At3g48680, mitochondrial O... [more]
YRDA_SHIFL1.656e-3144.44Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=... [more]
YRDA_ECOLI1.656e-3144.44Protein yrdA OS=Escherichia coli (strain K12) GN=y... [more]
Y304_METJA5.327e-3043.33Uncharacterized protein MJ0304 OS=Methanocaldococc... [more]
Y3753_PSEAE9.402e-2738.10Uncharacterized protein PA3753 OS=Pseudomonas aeru... [more]
PAAY_ECOLI7.450e-2437.33Phenylacetic acid degradation protein paaY OS=Esch... [more]
YTOA_BACSU3.697e-2338.89Uncharacterized transferase ytoA OS=Bacillus subti... [more]
CAIE_SALTY5.903e-2138.62Carnitine operon protein caiE OS=Salmonella typhim... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YH01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304344 ID=DY304344; Name=DY304344; organism=Citrus clementina; type=EST; length=1286bp
CTGAACGGTACCGTTCTGGCTCCAGCTTCTTTTCCTCATCAGTCAGTCAT
CACACACACAACACACCTCGCTCAAACTTAAGAAACCCAAAACCTCACTG
AACTTGAGCTCCAAAAGTATCGACACTCAGTCACCGATCCCCAAAGCCAA
CAAGAGATGGGAACCCTAGGGCGAGCAGTTTACACCGTTGGCTTCTGGAT
TCGCGAAACCGGTCAGGCCCTTGATCGCCTCGGCTGCCGTCTCCAAGGCA
ACTACTACTTCCAAGAGCAACTGTCTAGGCATCGAACTCTCATGAACATA
TTTGATAAAGCTCCCGCAGTCGACAAGGATGCATTTGTTGCTCCAAGTGC
CTCTATCATTGGTGATGTTCAAGTGGGAAGAGGGTCATCTATTTGGTATG
GATGTGTTTTGAGAGGGGATGTGAATAGCATCAGTGTTGGATCAGGAACA
AATATACAGGACAACTCCCTTGTGCATGTTGCGAAGTCTAATCTAAGTGG
GAAGGTGCTACCGACTACTATTGGGGACAATGTTACTGTAGGCCATAGTG
CTGTTTTACATGGCTGTACTGTTGAGGACGAGGCCTTTGTTGGCATGGGA
GCAACACTACTTGATGGTGTTGTTGTTGAGAGACATGGCATGGTTGCTGC
TGGATCTCTTGTGAGGCAGAATACCAGGATCCCTTCTGGAGAGGTATGGG
GAGGCAATCCAGCAAAGTTCCTGAGAAAGCTCACTGATGAAGAAATAGCC
TTTATTTCCCAGTCAGCCCCAATTATTCCAACTTGGCACAAGTTCATGCA
GCTGAAAATGCCAAGTCCCTCGATGAGATTGAATTTGAGAAAGTTCCTCG
CAAGAAGTTTGCCCGTCCGGATGAGGAAAACGACTCCATGGTCGGGGTTT
GTTCGTGAAACTCCCCCAGAAAATTATTTGTTCCTGAAAACCTCAAAAGA
TCCCAAATTCTTTGCAAAAATAAAATTTTTTCCAAGGTATTTTTTTTTCG
AGTTTGGAATCCTGGAATTTTGAAATCCAGGAAAAATTTGTTTGTTTCCG
TGCCAAAAACACTGGAGAAAAGGGGGGCCATCCTTTTTTCCCCAAATAAA
ACCCAAAAATGGTTAAAAAAAGAATCCGGGGGCCCCCCTTTTTAAGTGGG
CCCCCCTTTTTTACCCTTTCCCCCCCCCCCCCCCTTCTCTTGGGGAGCGG
TTTAAAAAAAAAAACCAATTTTTTCTTCTCCCCTCCCCCCCCCAAAAAAA
CCAAAGGGGCCCCCCCCCCCCCACCCCCCAGACTGA
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