DY304376

Overview
NameDY304376
Unique NameDY304376
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length844
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_PEA (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Pisum sativum GN=ACCA PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 5.947e-68
Identity = 126/202 (62.38%), Postives = 156/202 (77.23%), Query Frame = 3
Query:  243 ISHSSLAFTGASASDLFRSSKSDVNGMPLKALGRARFGSKSRGFAVS--AKLRKVKKHDYPWPKDPKDVDPNVKGGVLTHLSHFKPLKEKPKPVTLDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGRTYMF 842
            ++ SS    G++ASDL RSS +   G+PL+ LGRA    K R   VS  AKLRKVK+ +YPW  +P   DPN+KGG L HLS F+PLK+ PKPV L+FEKPL+ + KKI D RK+A  TG+D SDQI++LE KYQ+AL +LYT+LTPIQRV +ARHPNRPTFLDH++N+TEKFVELHGDR GYDDPAI  G+G +DG+TYMF
Sbjct:    1 MASSSATLVGSTASDLLRSSTTGFTGVPLRTLGRAGLVLKRRDLTVSVTAKLRKVKRREYPWSSNP---DPNMKGGRLRHLSTFQPLKQPPKPVILEFEKPLINMEKKINDFRKVAEKTGVDLSDQILALEAKYQKALVELYTNLTPIQRVTVARHPNRPTFLDHMYNMTEKFVELHGDREGYDDPAIAAGLGSIDGKTYMF 199          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_SYNP6 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=accA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.366e-24
Identity = 49/111 (44.14%), Postives = 81/111 (72.97%), Query Frame = 3
Query:  510 KPVTLDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGRTYMF 842
            KP+ L+FEKPLV L ++I  +R +A+D  +D S QI  LE +  Q  ++++++L+P QR+ +ARHP RP+ LD++  I+++++ELHGDR G DD A++ G+G +DG+  +F
Sbjct:    8 KPILLEFEKPLVELEERITQIRTLAADNQVDVSGQIQQLEARAIQLRREIFSNLSPAQRIQVARHPRRPSTLDYIQAISDEWIELHGDRNGSDDLALVGGVGALDGQPVVF 118          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_SYNE7 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Synechococcus elongatus (strain PCC 7942) GN=accA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.366e-24
Identity = 49/111 (44.14%), Postives = 81/111 (72.97%), Query Frame = 3
Query:  510 KPVTLDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGRTYMF 842
            KP+ L+FEKPLV L ++I  +R +A+D  +D S QI  LE +  Q  ++++++L+P QR+ +ARHP RP+ LD++  I+++++ELHGDR G DD A++ G+G +DG+  +F
Sbjct:    8 KPILLEFEKPLVELEERITQIRTLAADNQVDVSGQIQQLEARAIQLRREIFSNLSPAQRIQVARHPRRPSTLDYIQAISDEWIELHGDRNGSDDLALVGGVGALDGQPVVF 118          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_NOSP7 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=accA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.270e-24
Identity = 50/107 (46.73%), Postives = 78/107 (72.90%), Query Frame = 3
Query:  510 KPVTLDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGR 830
            KP+ LDFEKPL  L+ +I  +R++A + G+D S QI  LE +  Q  ++++T L+P QR+ +ARHP RP+ LD++  I+++++ELHGDR G DDPA++ GIG + G+
Sbjct:    7 KPLLLDFEKPLAELATRIDQIRQLAEENGVDVSGQIRQLEARAMQLREEIFTSLSPSQRLQVARHPRRPSTLDYIQAISDEWMELHGDRCGGDDPALVGGIGRLSGQ 113          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_ACAM1 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Acaryochloris marina (strain MBIC 11017) GN=accA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.270e-24
Identity = 47/103 (45.63%), Postives = 75/103 (72.82%), Query Frame = 3
Query:  522 LDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGR 830
            LDFEKPL  L  +I  +R ++   G+D +DQI  LE + +Q  +++++ LTP+Q + +ARHP RP+ LD++  I+++++ELHGDR GYDDPAI+ G+G + G+
Sbjct:   11 LDFEKPLAELEDRIEQIRSLSEQNGVDVTDQIAQLEGRAEQLRQEIFSSLTPMQELQLARHPRRPSTLDYIHAISDEWMELHGDRRGYDDPAIVGGVGRIGGQ 113          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_CYAP4 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=accA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.616e-23
Identity = 49/107 (45.79%), Postives = 77/107 (71.96%), Query Frame = 3
Query:  510 KPVTLDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGR 830
            KP+ L+FEKPL  L  +I  VR+ +++ G+D SDQI  LEN   Q  +++++ LTP Q++ +ARHP RP+ LD++  I+++++ELHGDR G DDPAI+ G+  + G+
Sbjct:    6 KPILLEFEKPLAELEAQINQVRQKSAELGVDVSDQIRELENNSTQLRQEIFSKLTPSQKLQLARHPRRPSTLDYIQAISDEWMELHGDRYGSDDPAIVAGVARLAGQ 112          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_CYAA5 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Cyanothece sp. (strain ATCC 51142) GN=accA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.616e-23
Identity = 48/111 (43.24%), Postives = 76/111 (68.47%), Query Frame = 3
Query:  498 KEKPKPVTLDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGR 830
            K + +   LDFEKPL  L  +I  +R +A +  +D S+QI  LE++ Q   +++++ LTP QR+ +ARHP RP+ LD++ +I +++ ELHGDR GYDDPA++ G+  + GR
Sbjct:    3 KNERRTFLLDFEKPLWELEARIEQIRHLAEENNVDVSEQIAQLESRAQNLRQEIFSSLTPSQRLQLARHPRRPSTLDYIQSIADEWFELHGDRGGYDDPALVGGVARLGGR 113          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_CYAP8 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Cyanothece sp. (strain PCC 8801) GN=accA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23
Identity = 47/111 (42.34%), Postives = 76/111 (68.47%), Query Frame = 3
Query:  498 KEKPKPVTLDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGR 830
            K + +   LDFEKPL  L  +I  +R++A +  +D S+QI  LE + ++  +++++ LTP QR+ +ARHP RP+ LD++  I +++ ELHGDR GYDDPA++ G+  + GR
Sbjct:    3 KNERRTFLLDFEKPLWELEARINQIRELAEENNVDVSEQIAQLERRAEELRQEIFSTLTPSQRLQLARHPRRPSTLDYIQAIADEWFELHGDRGGYDDPALVGGVARLGGR 113          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_TRIEI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Trichodesmium erythraeum (strain IMS101) GN=accA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.939e-23
Identity = 48/113 (42.48%), Postives = 80/113 (70.80%), Query Frame = 3
Query:  495 LKEKPKPVTLDFEKPLVGLSKKIMDVRKMASD-TGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGR 830
            + +  + + LDFEKPL  L  +I  +R++A D + +D S+QI  LE K  Q  +++++ L+P+Q++ +ARHP RPT LD++  I+++++ELHGDR G DDPAI+ G+  ++GR
Sbjct:    1 MPKSERKILLDFEKPLAELENRINQIRELAKDCSSVDVSEQIYQLEAKATQLRQEIFSSLSPVQKLQLARHPRRPTSLDYIQAISDEWIELHGDRGGSDDPAIVGGLARVNGR 113          
BLAST of DY304376 vs. ExPASy Swiss-Prot
Match: ACCA_ANAVT (Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=accA PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.939e-23
Identity = 47/107 (43.93%), Postives = 77/107 (71.96%), Query Frame = 3
Query:  510 KPVTLDFEKPLVGLSKKIMDVRKMASDTGLDFSDQIVSLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIITGIGGMDGR 830
            KP+ LDFEKPL  L+ +I  +R++A + G+D S +I  LE +  Q  +++++ L+P QR+ +ARHP RP+ LD++  I+++++ELHGDR G DDPA+I G+  + G+
Sbjct:    7 KPLLLDFEKPLAELANRIDQIRQLAEENGVDVSGEIRKLETRAMQLREEIFSTLSPSQRLQVARHPRRPSTLDYIQAISDEWMELHGDRCGGDDPALIGGVARLGGK 113          
The following BLAST results are available for this feature:
BLAST of DY304376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
ACCA_PEA5.947e-6862.38Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_SYNP62.366e-2444.14Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_SYNE72.366e-2444.14Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_NOSP75.270e-2446.73Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_ACAM15.270e-2445.63Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_CYAP42.616e-2345.79Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_CYAA52.616e-2343.24Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_CYAP87.610e-2342.34Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_TRIEI9.939e-2342.48Acetyl-coenzyme A carboxylase carboxyl transferase... [more]
ACCA_ANAVT9.939e-2343.93Acetyl-coenzyme A carboxylase carboxyl transferase... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YI10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304376 ID=DY304376; Name=DY304376; organism=Citrus clementina; type=EST; length=844bp
CCTCTATCTCGTTTGCTTAATAATACTCGTCTTCTCCACTGTCGCCTTCC
TCTCTTCATAAAAATTTTACGCCTCCGCGCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCGCTCTCTCTCGCTCTCTCGCTGTCTGAAGATCTCAAATTCTC
TGTCACTTTTCTGATTTGATTTCTTGGAGCTTAATTCAAAAATTGAGCTC
TTGCTGAAAGGAATTGAATAGTAGATTTGGAGAATGGCTACGATTTCACA
TTCTTCGCTTGCATTTACCGGAGCTTCAGCTTCGGATCTTTTTCGGAGCT
CCAAAAGCGATGTGAATGGTATGCCTCTGAAAGCCCTAGGGAGGGCCAGA
TTTGGGAGTAAGAGCAGGGGATTCGCTGTGAGTGCAAAGCTTAGGAAAGT
GAAGAAGCACGACTATCCTTGGCCCAAGGACCCCAAGGATGTTGATCCTA
ATGTGAAAGGCGGAGTACTTACTCATCTTTCACATTTCAAGCCGTTGAAG
GAGAAGCCGAAGCCTGTAACTTTGGATTTTGAGAAGCCGCTTGTTGGTCT
CTCAAAGAAGATCATGGATGTGCGGAAGATGGCAAGTGATACTGGTTTGG
ACTTCAGTGATCAGATTGTATCATTGGAAAATAAGTATCAACAGGCTCTA
AAGGATTTATACACGCATCTGACCCCTATACAACGTGTGAATATTGCAAG
GCATCCCAACAGACCCACTTTCCTCGATCATGTGTTTAACATTACCGAGA
AGTTCGTGGAGCTTCACGGAGATCGAGCAGGGTATGATGATCCTGCTATA
ATAACTGGTATAGGAGGCATGGATGGTAGAACGTACATGTTTAG
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