DY304380

Overview
NameDY304380
Unique NameDY304380
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1219
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_ARATH (Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.499e-85
Identity = 97/117 (82.91%), Postives = 105/117 (89.74%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGK 988
            LIGLKNIFARQLPNMPKEYIVRL+MDR HKSVMV+RGN+VVGGITYRPY SQKFGEIAFCAITADE VKGYGTRLMNHLKQHAR+VDGLTHFLTYA+ NA GY +  GF K+ +  K
Sbjct:  234 LIGLKNIFARQLPNMPKEYIVRLLMDRKHKSVMVLRGNLVVGGITYRPYHSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFVKQGFTKEIYLEK 350          

HSP 2 Score: 139.428 bits (350), Expect = 1.499e-85
Identity = 92/209 (44.02%), Postives = 112/209 (53.59%), Query Frame = 1
Query:   40 AHSAHLTAPNXXXXXXXXXXXXXXXXXXXXXIHKRKLXXXXXXXX--SEDHAP--HAFPPS-FSADTRDGALTSNDDLESISARGAXXXXXXXXXXXXXXXXXXXXXXXXXX----MRTFTAARLENNNSV-GSARNTKLKTENSTVKIENSDGGKEXXXXXXXXXXXXXXXXXXVLGTAGKEDTVKIFTENIQASGAYSAREELLKRE 636
            +HS+HL A N                     +HKRKL          SEDHAP   +FPPS FSADTRDGALTSND+LESISARGA                              +RTFTAARL++++ V GS+RNTKLKTE+STVK+E+SDGGK+                  + G   K+++VK+  EN Q SGAY AREE LKRE
Sbjct:    3 SHSSHLNAANRSRSSQTPSPSHSASASVTSSLHKRKLAATTAANAAASEDHAPPSSSFPPSSFSADTRDGALTSNDELESISARGADTDSDPDESEDIVVDDDEDEFAPEQDQDSSIRTFTAARLDSSSGVNGSSRNTKLKTESSTVKLESSDGGKDGGSSVVGTGVSGTVGGSSISGLVPKDESVKVLAENFQTSGAYIAREEALKRE 211          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_ORYSJ (Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica GN=GCN5 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 2.954e-59
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGKKNRWQ 1003
            L+GLKNIFARQLPNMPKEYIVRLVMDR+HKS+MVIR N+VVGGITYRPY SQKFGEIAFCAITADE VKGYGTRLMNHLKQHAR+ DGLTHFLTYA+ NA GY +  GF  K+ T  K RWQ
Sbjct:  178 LVGLKNIFARQLPNMPKEYIVRLVMDRTHKSMMVIRNNIVVGGITYRPYTSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDADGLTHFLTYADNNAVGYFVKQGF-TKEITLDKERWQ 298          

HSP 2 Score: 47.3654 bits (111), Expect = 2.954e-59
Identity = 36/92 (39.13%), Postives = 42/92 (45.65%), Query Frame = 1
Query:  361 MRTFTAARLENNNSVGSARNTKLKTENSTVKIENSDGGKEXXXXXXXXXXXXXXXXXXVLGTAGKEDTVKIFTENIQASGAYSAREELLKRE 636
            + TFTAARL+      S R  K   E+STV    +                            GKED   +FT+NIQ SGAYSAREE LKRE
Sbjct:   75 LHTFTAARLDGAPPSSSGRPPK--PESSTVSAAAAAAAAAAAPKPDSASAAAGD---------GKEDPKGLFTDNIQTSGAYSAREEGLKRE 155          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_SCHPO (Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe GN=gcn5 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 6.510e-30
Identity = 66/122 (54.10%), Postives = 85/122 (69.67%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV-VVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGKKNRW 1000
            L GLKNIF +QLP MPKEYI RL+ DR+H S+ +++ N+ VVGGITYRP+  + F EI FCAI ++E V+GYG+ LMNHLK + R    + HFLTYA+  A GY    GF  K+ T  K+ W
Sbjct:  135 LTGLKNIFMKQLPKMPKEYITRLIYDRNHLSMTIVKDNLHVVGGITYRPFEQRGFAEIVFCAIASNEQVRGYGSHLMNHLKDYVRGTTTIQHFLTYADNYAIGYFKKQGF-TKEITLDKSIW 255          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_KLULA (Histone acetyltransferase GCN5 OS=Kluyveromyces lactis GN=GCN5 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 6.510e-30
Identity = 69/122 (56.56%), Postives = 84/122 (68.85%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV-VVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGKKNRW 1000
            L GLKNIF +QLP MPKEYI RLV DRSH S+ V+R  + VVGGITYRP+  ++F EI FCAI++ E V+GYG  LMNHLK + R    + +FLTYA+  A GY    GF  K+ T  KN W
Sbjct:  194 LTGLKNIFQKQLPKMPKEYIARLVYDRSHLSMAVVRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRATSPIKYFLTYADNYAIGYFKKQGF-TKEITLDKNVW 314          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_YEAST (Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae GN=GCN5 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 8.503e-30
Identity = 69/122 (56.56%), Postives = 84/122 (68.85%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV-VVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGKKNRW 1000
            L GLKNIF +QLP MPKEYI RLV DRSH S+ VIR  + VVGGITYRP+  ++F EI FCAI++ E V+GYG  LMNHLK + R    + +FLTYA+  A GY    GF  K+ T  K+ W
Sbjct:  117 LTGLKNIFQKQLPKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFDKREFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSNIKYFLTYADNYAIGYFKKQGF-TKEITLDKSIW 237          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_CANGA (Histone acetyltransferase GCN5 OS=Candida glabrata GN=GCN5 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.111e-29
Identity = 69/122 (56.56%), Postives = 83/122 (68.03%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV-VVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGKKNRW 1000
            L GLKNIF +QLP MPKEYI RLV DRSH S+ VIR  + VVGGITY+P+  ++F EI FCAI++ E V+GYG  LMNHLK + R    + +FLTYA+  A GY    GF  KD T  K  W
Sbjct:  224 LTGLKNIFQKQLPKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYKPFNKRQFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRNTSDIRYFLTYADNYAIGYFKKQGF-TKDITLDKKVW 344          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_ASHGO (Histone acetyltransferase GCN5 OS=Ashbya gossypii GN=GCN5 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.894e-29
Identity = 71/139 (51.08%), Postives = 90/139 (64.75%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV-VVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGKKNRWQRVWLMFNSQTLGKSLI 1051
            L GLKNIF +QLP MPKEYI RLV DRSH S+ VIR  + VVGGITYRP+   +F EI FCAI++ E V+GYG  LMNHLK + R    + +FLTYA+  A GY     F K+ FT +    + VW+ +     G +L+
Sbjct:  130 LTGLKNIFQKQLPKMPKEYIARLVYDRSHLSMAVIRKPLTVVGGITYRPFEKGEFAEIVFCAISSTEQVRGYGAHLMNHLKDYVRATTNIKYFLTYADNYAIGY-----FKKQGFTKEITLDKSVWMGYIKDYEGGTLM 263          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_DEBHA (Histone acetyltransferase GCN5 OS=Debaryomyces hansenii GN=GCN5 PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 4.220e-29
Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV-VVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGKKNRW 1000
            L GLKNIF +QLP MP+EYI RLV DRSH S+ V+R  + VVGGITYRP+ +++F EI FCAI++ E V+GYG  LMNHLK + R    + +FLTYA+  A GY    GF  K+ T  K+ W
Sbjct:  131 LTGLKNIFQKQLPKMPREYISRLVYDRSHLSMAVVRKPLTVVGGITYRPFDNREFAEIVFCAISSTEQVRGYGAHLMNHLKDYCRATSNVKYFLTYADNYAIGYFKKQGF-NKEITLDKSVW 251          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: GCN5_YARLI (Histone acetyltransferase GCN5 OS=Yarrowia lipolytica GN=GCN5 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.094e-28
Identity = 67/139 (48.20%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNV-VVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKKDFTGKKNRWQRVWLMFNSQTLGKSLI 1051
            L GLKNIF +QLP MP+EYI RLV DRSH S+ V+R  + VVGGIT+RP+ ++KF EI FCAI++ E V+GYG  LMNHLK + +    + +FLTYA+  A GY     F K+ F+ + +  + VW+ +     G +L+
Sbjct:  144 LTGLKNIFQKQLPKMPREYIARLVYDRSHVSMAVVRKPLTVVGGITFRPFDTRKFAEIVFCAISSTEQVRGYGAHLMNHLKDYVKATSPVMYFLTYADNYAIGY-----FKKQGFSKEISLDRSVWMGYIKDYEGGTLM 277          
BLAST of DY304380 vs. ExPASy Swiss-Prot
Match: KAT2B_HUMAN (Histone acetyltransferase KAT2B OS=Homo sapiens GN=KAT2B PE=1 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 5.159e-27
Identity = 60/112 (53.57%), Postives = 82/112 (73.21%), Query Frame = 2
Query:  638 LIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRGNVVVGGITYRPYVSQKFGEIAFCAITADETVKGYGTRLMNHLKQHAREVDGLTHFLTYAEQNAGGYLI*TGFYKK 973
            L+GL+N+F+ QLP MPKEYI RLV D  HK++ +I+   V+GGI +R + SQ F EI FCA+T++E VKGYGT LMNHLK++  + D + +FLTYA++ A GY    GF K+
Sbjct:  515 LVGLQNVFSHQLPRMPKEYITRLVFDPKHKTLALIKDGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHD-ILNFLTYADEYAIGYFKKQGFSKE 625          
The following BLAST results are available for this feature:
BLAST of DY304380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
GCN5_ARATH1.499e-8582.91Histone acetyltransferase GCN5 OS=Arabidopsis thal... [more]
GCN5_ORYSJ2.954e-5981.15Histone acetyltransferase GCN5 OS=Oryza sativa sub... [more]
GCN5_SCHPO6.510e-3054.10Histone acetyltransferase gcn5 OS=Schizosaccharomy... [more]
GCN5_KLULA6.510e-3056.56Histone acetyltransferase GCN5 OS=Kluyveromyces la... [more]
GCN5_YEAST8.503e-3056.56Histone acetyltransferase GCN5 OS=Saccharomyces ce... [more]
GCN5_CANGA1.111e-2956.56Histone acetyltransferase GCN5 OS=Candida glabrata... [more]
GCN5_ASHGO1.894e-2951.08Histone acetyltransferase GCN5 OS=Ashbya gossypii ... [more]
GCN5_DEBHA4.220e-2954.92Histone acetyltransferase GCN5 OS=Debaryomyces han... [more]
GCN5_YARLI2.094e-2848.20Histone acetyltransferase GCN5 OS=Yarrowia lipolyt... [more]
KAT2B_HUMAN5.159e-2753.57Histone acetyltransferase KAT2B OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YI15RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304380 ID=DY304380; Name=DY304380; organism=Citrus clementina; type=EST; length=1219bp
CATTGATTCAAGTCCATCTGAAGAGAGATGGATACGCACGCCCACTCCGC
TCACCTAACCGCACCGAACCGCTCCCGCAGCTCACAGACCCCGTCCCCGT
CCCACTCCGCCTCTGCATCCGCCACGTCATCCATTCACAAGCGCAAGCTT
GCAGCAACAGCCGCGGCAGGTGCGTCTGAAGACCACGCGCCGCATGCATT
CCCTCCCTCCTTCTCCGCCGACACTCGTGACGGCGCGTTGACCTCGAATG
ACGACCTCGAGAGCATCTCCGCCCGCGGCGCCGACTCTGACGCTGACGAC
TCCGAGGATGCCGTCGTTGACGACGATGAGGACGAGTTCGAGAACGACAA
CGACTCCTCTATGCGTACTTTCACCGCGGCTCGCCTGGAGAATAATAATT
CCGTCGGCTCGGCAAGAAATACGAAGCTAAAGACGGAGAATTCGACCGTT
AAAATTGAGAATTCCGATGGCGGGAAGGAAGGGGTTACCTCCGGGAGTGG
TGTGCTTGGGTCCACTGCTCTGGCCGGTAGCTCGGTGCTGGGAACTGCAG
GTAAAGAAGACACGGTGAAGATTTTTACAGAGAATATACAAGCTAGTGGA
GCTTATAGTGCAAGAGAGGAGCTCTTGAAGAGAGAGGTTGATAGGATTGA
AGAATATATTTGCAAGGCAACTACCTAACATGCCTAAGGAGTACATTGTG
CGTCTTGTGATGGATAGAAGCCACAAATCGGTTATGGTTATCAGAGGAAA
TGTGGTTGTTGGTGGCATCACATATCGCCCATATGTCAGTCAAAAGTTTG
GGGAGATAGCTTTTTGTGCAATCACAGCTGATGAAACAGTAAAAGGCTAT
GGTACCAGACTGATGAACCATCTAAAACAGCATGCCCGTGAAGTGGATGG
GCTTACGCATTTTCTAACATATGCTGAACAAAATGCCGGGGGGTATTTAA
TTTAAACGGGGTTTTACAAAAAAGATTTTACTGGGAAAAAAAATCGATGG
CAAAGGGTATGGTTAATGTTCAACTCCCAAACCCTTGGAAAAAGTTTAAT
TTTTTATGTTTCGGGAGAGGTTATTTCGGTTTAGGGGTTTTGGGGGTTTG
AAAAAAATTTTAACAGGTTCTTCTCAAATAAAAAAAAAAACTCTAATTTT
TTTTTTTTTTTTTTTCCCTTTTTGAATCTTTTTTTCTCATATTTTTTTTT
TGTGTCTTATTTCTAAATG
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