DY304386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304386 vs. ExPASy Swiss-Prot
Match: UBAX1_ARATH (UBA and UBX domain-containing protein At4g15410 OS=Arabidopsis thaliana GN=At4g15410 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 2.376e-59 Identity = 136/301 (45.18%), Postives = 169/301 (56.15%), Query Frame = 3 Query: 9 EANSSLINSFVEITSSTKDEALFFLESHQWNLDAAVSTFLDNXXXXXXXXXXXXXV--ATLPAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPYELRSRSRPGKKEDKKAATG--TSR-----GGIRTLADLNRTPPGGAXXXXXXXEPQQYYTGGEKSGMLVQDPTKGNQVDEIFNQARQSAVERPDLRASSSSKAFTGTARLLSGETVSSAP----APPPENVSHNITFWRNGFTVDDGPLRGMDDPGNASFLESIMRSECPRGXXXXXXXTRGLVELINKRKEEYS*TTEPP 872 E N +LINSF+EITSS+++EA FFLESH WNLDAAVSTFLDN ++ A PY LRSR G+ ++ + +G +SR G IRT ADLNR+P G E +YYTGG+KSGM+VQDP K VDE+F+QARQSAV+RP + S+S +FTG ARLLSGE VSS+P P+ + H ITFW NGFTV+DGPLRG DP NA+F+ SI RSECP V+L+ +R E + TEPP Sbjct: 4 ETNENLINSFIEITSSSREEANFFLESHTWNLDAAVSTFLDNDAAAAAEPNPTGPPPPSSTIAGAQSPSQSHSPDYTPSETSPSPSRSRSASPSSRAAPYGLRSRGGAGENKETENPSGIRSSRSRQHAGNIRTFADLNRSPADGEGSDSD--EANEYYTGGQKSGMMVQDPKKVKDVDELFDQARQSAVDRPVEPSRSASTSFTGAARLLSGEAVSSSPQQQQQEQPQRIMHTITFWLNGFTVNDGPLRGFSDPENAAFMNSISRSECPSELEPADKKIPVHVDLV-RRGENF---TEPP 298 HSP 2 Score: 34.6538 bits (78), Expect = 2.376e-59 Identity = 20/52 (38.46%), Postives = 27/52 (51.92%), Query Frame = 1 Query: 847 NTLEPPNRRSAFQGVGRTLGGSDS-------SAFCGLNHCPLPVHRVLVGDA 981 N EPP ++ FQGVGRTLG S S ++ +N P P ++V A Sbjct: 293 NFTEPPKPKNPFQGVGRTLGASGSGSSSAPQASSAPMNVAPAPSRGLVVDPA 344
BLAST of DY304386 vs. ExPASy Swiss-Prot
Match: NSF1C_DICDI (NSFL1 cofactor p47 homolog OS=Dictyostelium discoideum GN=nsfl1c PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.623e-18 Identity = 73/220 (33.18%), Postives = 99/220 (45.00%), Query Frame = 3 Query: 318 SRP-GKKEDKKAATGTSRGGIRTLADLNRTPPGGAXXXXXXXEP----QQYYTGGEKSGMLVQDPTK-------GNQVDEIFNQAR--------QSAVERPDLRASSSSKAFTGTARLLSGETVSSAPAPPPEN--VSHNITFWRNGFTVDDGPLRGMDDPGNASFLESIMRSECPRGXXXXXXXTRGL-VELINKRKEEYS*TTEPP-ICFPGCRENFG 905 S+P K KKA G GGIRTL+D N + QQY+TGGEKSG++V+ K G+ V+++F+ A+ + VE+PD S S + A VS P + V +TFW GFT+DDGPLR D+P N L+ I R PR GL V LIN ++Y +P + F G + G Sbjct: 81 SKPVAKTVSKKAPAGGRVGGIRTLSDFNNDDHDDHDHSDGDDDEDDRSQQYFTGGEKSGLVVESAPKKGKNGGSGDIVNDVFDSAKRHGAVASNEKKVEKPD---SFDSVGYQLGATDQGNRNVSKPKEKDPNSQVVEVKVTFWNQGFTIDDGPLRKYDNPENKELLDDIQRGIVPRELQKKATTPNGLSVTLINNHNQDYVEPAKPKYVAFSGGGQTLG 297
BLAST of DY304386 vs. ExPASy Swiss-Prot
Match: UBX1_EMENI (UBX domain-containing protein 1 OS=Emericella nidulans GN=ubx1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.738e-12 Identity = 47/122 (38.52%), Postives = 62/122 (50.82%), Query Frame = 3 Query: 441 EPQQYYTGGEKSGMLVQDPTKGNQVDEIFNQARQSAVERPDLRASSSSKAFTGTARLLSGETVSS-------APAPP--PENVSHNITFWRNGFTVDDGPLRGMDDPGNASFLESIMRSECP 779 E Q ++ GGEKSG+ VQ+P + +I +AR++ + D + FTG AR L GE S PA P P V + FW +GF+VDDG L DDP NA L SI + P Sbjct: 102 ENQDFFAGGEKSGLAVQNPDDLKK--KIIEKARRTQLPASD-DSEPRRNYFTGPARTLGGEDTPSRVIDTPSGPAQPQIPRRVRRTLHFWADGFSVDDGELYRSDDPQNAEILNSIRQGRAP 220 The following BLAST results are available for this feature:
BLAST of DY304386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304386 ID=DY304386; Name=DY304386; organism=Citrus clementina; type=EST; length=1295bpback to top |