DY304388

Overview
NameDY304388
Unique NameDY304388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1261
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN2_BOVIN (Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.883e-72
Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I  GQK+MEK
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITFGQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN2_RAT (Erlin-2 OS=Rattus norvegicus GN=Erlin2 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 2.460e-72
Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I  GQK+MEK
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPHAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN2_PONAB (Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 2.460e-72
Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I  GQK+MEK
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN2_MOUSE (Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 2.460e-72
Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I  GQK+MEK
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN2_HUMAN (Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 2.460e-72
Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGH+GVY+RGGALL + + PGFHL LP IT Y+ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D T  APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V++I  GQK+MEK
Sbjct:   24 HKIEEGHIGVYYRGGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNFLVPNAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVYIELFDQIDENLKLALQQDLTSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERL2B_XENLA (Erlin-2-B OS=Xenopus laevis GN=erlin2-B PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 7.156e-72
Identity = 134/213 (62.91%), Postives = 167/213 (78.40%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGHVGVY+RGGALL T + PGFHL LP IT ++ VQ TLQTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDK  I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D    APGI I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K AI EAEK A V++I  GQK+MEK
Sbjct:   24 HKIEEGHVGVYYRGGALLTTTSGPGFHLMLPFITSFKSVQSTLQTDEVKNVPCGTSGGVMIYFDRIEVVNYLISSAVYDIVKNYTADYDKALIFNKIHHELNQFCSVHNLQEVYIELFDQIDEDLKLALQKDLNLMAPGIIIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKAIIEAEKVAQVAQIKYGQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN2_XENTR (Erlin-2 OS=Xenopus tropicalis GN=erlin2 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 9.346e-72
Identity = 132/213 (61.97%), Postives = 168/213 (78.87%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGHVGVY+RGGALL + + PGFHL LP IT ++ VQ T+QTD+V ++PCGT GGVMI F++IEVVN L    VY+ +++Y   YDKT I++KIHHE+NQFCS H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRN+E ME E+T++LIA +KQKV EKEAET +K AI EAEK A V++I  GQK+MEK
Sbjct:   24 HKIEEGHVGVYYRGGALLTSTSGPGFHLMLPFITSFKSVQSTMQTDEVKNVPCGTSGGVMIYFDRIEVVNYLIPSAVYDIVKNYTADYDKTLIFNKIHHELNQFCSVHNLQEVYIELFDQIDENLKLALQKDLNSMAPGLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLIAAQKQKVVEKEAETERKKAIIEAEKVAQVAEIKYGQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN1_MOUSE (Erlin-1 OS=Mus musculus GN=Erlin1 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 5.129e-70
Identity = 128/213 (60.09%), Postives = 165/213 (77.46%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V+KI   QK+MEK
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNTMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKRAVIEAEKIAQVAKIRFQQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN1_PONAB (Erlin-1 OS=Pongo abelii GN=ERLIN1 PE=2 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 6.698e-70
Identity = 128/213 (60.09%), Postives = 165/213 (77.46%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V+KI   QK+MEK
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEK 236
[Close]
BLAST of DY304388 vs. ExPASy Swiss-Prot
Match: ERLN1_HUMAN (Erlin-1 OS=Homo sapiens GN=ERLIN1 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 6.698e-70
Identity = 128/213 (60.09%), Postives = 165/213 (77.46%), Query Frame = 1 
Query:  214 HQIPEGHVGVYWRGGALLETITHPGFHLKLPLITHYEPVQVTLQTDQVTDIPCGTKGGVMINFEKIEVVNRLRKEYVYETLRDYGVQYDKTWIYDKIHHEINQFCSSHSLQQVYIDVFDQIDEKMKDALQVDCTRYAPGIEIISVRVTKPTIPDRIRRNFEQMEEERTRVLIAIEKQKVAEKEAETSKKMAISEAEKNANVSKILMGQKLMEK 852
            H+I EGH+ VY+RGGALL + + PG+H+ LP IT +  VQ TLQTD+V ++PCGT GGVMI  ++IEVVN L    V++ +R+Y   YDKT I++KIHHE+NQFCS+H+LQ+VYI++FDQIDE +K ALQ D    APG+ I +VRVTKP IP+ IRRNFE ME E+T++LIA +KQKV EKEAET +K A+ EAEK A V+KI   QK+MEK
Sbjct:   24 HKIEEGHLAVYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDLNLMAPGLTIQAVRVTKPKIPEAIRRNFELMEAEKTKLLIAAQKQKVVEKEAETERKKAVIEAEKIAQVAKIRFQQKVMEK 236
The following BLAST results are available for this feature:
BLAST of DY304388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
ERLN2_BOVIN1.883e-7261.97Erlin-2 OS=Bos taurus GN=ERLIN2 PE=2 SV=1[more]
ERLN2_RAT2.460e-7261.97Erlin-2 OS=Rattus norvegicus GN=Erlin2 PE=1 SV=1[more]
ERLN2_PONAB2.460e-7261.97Erlin-2 OS=Pongo abelii GN=ERLIN2 PE=2 SV=1[more]
ERLN2_MOUSE2.460e-7261.97Erlin-2 OS=Mus musculus GN=Erlin2 PE=1 SV=1[more]
ERLN2_HUMAN2.460e-7261.97Erlin-2 OS=Homo sapiens GN=ERLIN2 PE=1 SV=1[more]
ERL2B_XENLA7.156e-7262.91Erlin-2-B OS=Xenopus laevis GN=erlin2-B PE=2 SV=1[more]
ERLN2_XENTR9.346e-7261.97Erlin-2 OS=Xenopus tropicalis GN=erlin2 PE=2 SV=1[more]
ERLN1_MOUSE5.129e-7060.09Erlin-1 OS=Mus musculus GN=Erlin1 PE=2 SV=1[more]
ERLN1_PONAB6.698e-7060.09Erlin-1 OS=Pongo abelii GN=ERLIN1 PE=2 SV=2[more]
ERLN1_HUMAN6.698e-7060.09Erlin-1 OS=Homo sapiens GN=ERLIN1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YJ02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304388 ID=DY304388; Name=DY304388; organism=Citrus clementina; type=EST; length=1261bp
AGCAAATTCTCTCGCGCACATTTTGGCAACAGTTGAAACCCCGCCATGGA
TCCACAGCAACAAGGAGTAGGCGCTACACAGGCACAGCCTCGGCCTCAGC
CTCAGCCTGGCGATTCGTCTGCTATACTCGCCGTGTTCCTCACTTTCATC
GCTATTGTCTCACTGATATTGATCCCATCATCGTCATCCATCAAAAGTAG
CCTGGCCATTTTGCACCAAATTCCAGAAGGCCACGTTGGAGTATATTGGA
GAGGAGGTGCCCTTCTAGAGACAATTACACACCCAGGCTTCCATCTGAAG
TTGCCTTTGATAACACACTACGAGCCTGTTCAAGTGACCCTTCAGACAGA
TCAGGTTACTGACATTCCATGTGGGACCAAAGGGGGTGTAATGATCAACT
TTGAGAAGATAGAGGTTGTTAACCGGCTTCGTAAGGAATATGTGTACGAG
ACTCTGCGCGACTATGGCGTGCAATATGACAAGACATGGATATATGACAA
GATTCATCATGAGATCAATCAGTTCTGTAGTTCTCATAGTCTGCAACAAG
TCTATATTGATGTGTTTGATCAGATTGACGAAAAGATGAAGGATGCTCTT
CAGGTTGACTGCACGCGTTATGCTCCAGGCATTGAAATTATCAGTGTGCG
TGTTACAAAGCCTACTATTCCAGATAGAATCAGAAGAAATTTTGAACAAA
TGGAAGAGGAACGTACTAGGGTGTTAATTGCTATTGAGAAACAGAAAGTA
GCTGAGAAAGAGGCAGAGACAAGCAAAAAGATGGCTATCAGTGAAGCTGA
GAAGAATGCCAATGTTAGCAAGATCCTTATGGGACAGAAGTTGATGGAAA
AAGGACAGTGCTCGGAAGCAGGAGGAAAATGACAAATCAATGTACTTGGC
TCGTCAAAGGGCCTGGGGCAAAGCTGATTTCCAACGCCTACTGAAAGAAG
CAAAGGCAAACAAGCTGAAGCTTACTCCTGAAAATCCTGGAACTTGAATT
TATTGAGGGCCAAACCTGAAAAAACAAAAATTTTCCTTTGGTGAAAAGGG
TGCCTTACCATGATTTTTGGAACAAAGAAACTGCCTAGGGGAAATTTCCT
TCTCAAAAAAATTCCCCCAAAATTTACTCTCCAATAAAAGGGGAATCCGC
CCAAAATTGCCTTAAAAATGGCTAATTTTTTTGGGTTTTTGGTTTTTTTG
TGGGGGTGGGCCCCATATTAGAGGGGGTGGCGCCACCAAACCCCTTACTT
TTTGGTCTTTT
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