DY304393
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PAT16_SOLTU (Patatin-16 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 6.720e-16 Identity = 55/220 (25.00%), Postives = 106/220 (48.18%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL-VMNNPTAAAVTHVLHNKRDFPS 882 VLSID L LE Q++ + A++AD+FD+I GT G LL +M+ + + RP A + + +FN+ F R++ GK + +VL+E + + + FD+ ++ P +F++++ ++SP + +++ C +T+A P+ F P FA +++G K VDG + + +P +V+ ++ P+ Sbjct: 31 VLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF----RKYDGKYLMQVLQEKLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFATNTINGDKYELNLVDGAVATVADPALLSVSVATRRAQEDPA 241
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PT3K1_SOLTU (Patatin-3-Kuras 1 OS=Solanum tuberosum GN=pat3-k1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.335e-15 Identity = 52/208 (25.00%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGLVMNNPTAAAVT 849 VLSID L LE Q++ + A++AD+FD+I GTG G LL +M+ + + RP A+D + ++F +GF + ++ GK + +VL+E + + + FD+ ++ P +F++++ +++P + +++ C +T+A P+ F P FA + +G + VDG + +P+ +++ Sbjct: 19 VLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTGTGGLLTAMITTPNENNRPFAAAKDIIPFYFDHGPKIFE---PSGFHLVEPKYDGKYLMQVLQEKLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKTPELDAKMYDICYSTAAAPTYFPPHYFATNTSNGDQYDFNLVDGDVAAVDPSLLSIS 218
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PATD2_SOLTU (Patatin group D-2 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.335e-15 Identity = 52/197 (26.40%), Postives = 94/197 (47.72%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL 816 VLSID L LE Q++ + A++AD+FD+I GT G LL SM+ + + RP A + + +FN+ F ++ GK + +VL+E + + + FD+ ++ P +F+++D ++SP + +++ C +T+A P+ F P F +++G K VDG + Sbjct: 31 VLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIFNSSTGQFF---GPKYDGKYLMQVLQENLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSDLAKSPELDAKMYDICYSTAAAPTYFPPHYFTTNTINGDKYEFNLVDGAV 219
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PT1K2_SOLTU (Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.430e-15 Identity = 54/220 (24.55%), Postives = 105/220 (47.73%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL-VMNNPTAAAVTHVLHNKRDFPS 882 VLSID L LE Q++ + A++AD+FD+I GT G LL +M+ + + RP A + + +FN+ F ++ GK + +VL+E + + + FD+ ++ P +F++++ ++SP + +++ C +T+A P+ F P FA +++G K VDG + + +P +V+ ++ P+ Sbjct: 19 VLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF---GPKYDGKYLMQVLQEKLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFATNTINGDKYKFNLVDGAVATVADPALLSVSVATRRAQEDPA 230
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PATA3_SOLTU (Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.430e-15 Identity = 54/220 (24.55%), Postives = 105/220 (47.73%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL-VMNNPTAAAVTHVLHNKRDFPS 882 VLSID L LE Q++ + A++AD+FD+I GT G LL +M+ + + RP A + + +FN+ F ++ GK + +VL+E + + + FD+ ++ P +F++++ ++SP + +++ C +T+A P+ F P FA +++G K VDG + + +P +V+ ++ P+ Sbjct: 31 VLSIDGGGVKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF---GPKYDGKYLMQVLQEKLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFATNTINGDKYEFNLVDGAVATVADPALLSVSVATRRAQEDPA 242
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PAT02_SOLTU (Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.430e-15 Identity = 54/220 (24.55%), Postives = 105/220 (47.73%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL-VMNNPTAAAVTHVLHNKRDFPS 882 VLSID L LE Q++ + A++AD+FD+I GT G LL +M+ + + RP A + + +FN+ F ++ GK + +VL+E + + + FD+ ++ P +F++++ ++SP + +++ C +T+A P+ F P FA +++G K VDG + + +P +V+ ++ P+ Sbjct: 31 VLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF---GPKYDGKYLMQVLQEKLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFATNTINGDKYEFNLVDGAVATVADPALLSVSVATRRAQEDPA 242
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PAT01_SOLTU (Patatin-01 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.430e-15 Identity = 54/220 (24.55%), Postives = 105/220 (47.73%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL-VMNNPTAAAVTHVLHNKRDFPS 882 VLSID L LE Q++ + A++AD+FD+I GT G LL +M+ + + RP A + + +FN+ F ++ GK + +VL+E + + + FD+ ++ P +F++++ ++SP + +++ C +T+A P+ F P FA +++G K VDG + + +P +V+ ++ P+ Sbjct: 31 VLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF---GPKYDGKYLMQVLQEKLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFATNTINGDKYEFNLVDGAVATVADPALLSVSVATRRAQEDPA 242
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PAT08_SOLTU (Patatin-08 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.267e-14 Identity = 51/197 (25.89%), Postives = 94/197 (47.72%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL 816 VLSID L LE Q++ + A++AD+FD+I GT G LL SM+ + + RP A + + +FN+ F ++ GK + +VL+E + + + FD+ ++ P +F++++ ++SP + +++ C +T+A P+ F P F +++G K VDG + Sbjct: 31 VLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIFNSSTGQFF---GPKYDGKYLMQVLQENLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFTTNTINGDKYEFNLVDGAV 219
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PAT05_SOLTU (Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.162e-14 Identity = 55/220 (25.00%), Postives = 104/220 (47.27%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL-VMNNPTAAAVTHVLHNKRDFPS 882 VLSID L LE Q++ + A++AD+FD+I GT G LL +M+ + + RP A+D + + +FN+ F ++ GK + +VL+E + + + FD+ ++ P +F++++ ++SP + ++ C +T+A P+ F P FA + +G K VDG + + +P +V+ + P+ Sbjct: 31 VLSIDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIFNSSTGQFF---GPKYDGKYLMQVLQEKLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFATNTSNGDKYEFNLVDGAVATVADPALLSVSVATRRAEEDPA 242
BLAST of DY304393 vs. ExPASy Swiss-Prot
Match: PATA2_SOLTU (Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.823e-14 Identity = 53/220 (24.09%), Postives = 104/220 (47.27%), Query Frame = 1 Query: 235 VLSIDXXXXXXXXXXXXLIHLEDQIRLKTGDPHAQIADFFDIIAGTGIGALLASMLVADDGSGRPLFTARDALDLITRRNSELFNAGFSAGFLRRKRRFSGKSMDKVLKEIFMRDDGKVLTLKDTCKPLLVPCFDLNSSAPFVFSRADASESPSFNFELWKACRATSATPSMFKP--FALTSVDG-KTSCTAVDGGL-VMNNPTAAAVTHVLHNKRDFPS 882 VLSID L LE Q++ + A++AD+FD+I GT G LL +M+ + + RP A + + +FN+ F ++ GK + +VL+E + + + FD+ ++ P +F++++ ++SP + +++ C + +A P+ F P FA +++G K VDG + + +P +V+ ++ P+ Sbjct: 31 VLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF---GPKYDGKYLMQVLQEKLGE-----TRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSAAAAPTYFPPHYFATNTINGDKYEFNLVDGAVATVADPALLSVSVATRRAQEDPA 242 The following BLAST results are available for this feature:
BLAST of DY304393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304393 ID=DY304393; Name=DY304393; organism=Citrus clementina; type=EST; length=1185bpback to top |