DY304398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304398 vs. ExPASy Swiss-Prot
Match: Y3893_DICDI (Probable E3 ubiquitin-protein ligase DDB_G0283893 OS=Dictyostelium discoideum GN=DDB_G0283893 PE=3 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 1.680e-52 Identity = 115/326 (35.28%), Postives = 183/326 (56.13%), Query Frame = 1 Query: 1 WSLGLKLPSVPHILSMLRGLSMGHLATQRCIDEGGILPLLHALEGVSGEN-EIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRV----------------------NLGGGTSGSARGECVY---TTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVPIAQYVRYVDQYWDNLNALGRADGSRLRLLTYDICLMLARFATGASFSAKNKGGGKRKQLQVSAFY 900 W L+ P++P +L +L+GL+MGH TQ E ++ +H LE +G + +IG+ AENLL++++ +G+ + VS R ++ E A + RE +L+ LG+ Q+ G+ I+ + CMVCREGYS +PTD+LG+Y++SKR+ +L +SG G +Y TTV++FN IHF CH++A +AD ++K PK+EWEGA LRN ++ CN LFPV P + + Y D++W NLN + R +G + R+L++D+ +L R A SFS +KGGGK ++++ + Sbjct: 5350 WLSSLEKPALPFVLVLLKGLAMGHEPTQNMTLESNLIKRIHILEETAGTSAKIGSLAENLLESIA----EGNEKTSKIVSDTRKESKMEKLSHAQKHREDVLKQLGLAQQ-----GKHIMAN--VVPGSIEDLDDDEGFTCMVCREGYSFKPTDVLGIYTFSKRIPLTSVGETTCPPSSTTNVAASLSLSPSSSGGGGGGALYYGFTTVTHFNFIHFNCHRDATKADRSMKVPKEEWEGAALRNQQTKCNGLFPVLPPKMNSDAFTPYSDKFWVNLNNISRVEGPKFRILSHDLKFLLIRLAKDESFSTDSKGGGKESNIRIAPMF 5664
BLAST of DY304398 vs. ExPASy Swiss-Prot
Match: UBR4_RAT (E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus GN=Ubr4 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 1.057e-38 Identity = 105/296 (35.47%), Postives = 150/296 (50.68%), Query Frame = 1 Query: 1 WSLGLKLPSVPHILSMLRGLSMGHLATQRCIDEGGILPLLHALEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVPIAQYVRYVDQYWDNLNALGRADGSRLRLLTYDICLMLARFATGASFSAKNKGGGKRKQLQV 888 W L P++P IL +LRGL+M H ATQ I I L H LE VS + IG AENLL+ L + +K+ R TR E +R+A+ R++ L LGM ++ G+ VV + C +CREGY +PT +LG+Y+++KRV L R + Y+TVS+FNI+H+ CH A R L ++EWE A L+N + CN L PV GP VP + + + ++ L +L +DI L+ RFA SFSA GGG+ + + Sbjct: 4721 WKKFLSRPALPFILRLLRGLAMQHPATQVLIGTDSITSL-HKLEQVSSDEGIGTLAENLLEALREHPD-----VNKKIDAARRETRAEKKRMAMAMRQKALGTLGMT---TNEKGQ--VVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVAL-EEMENKPRKQQGYSTVSHFNIVHYDCHLAAVR----LARGREEWESAALQNANTKCNGLLPVWGPHVPESAFATCLARHNTYLQECTGQREPTYQLNIHDIKLLFLRFAMEQSFSADTGGGGRESNIHL 5000
BLAST of DY304398 vs. ExPASy Swiss-Prot
Match: UBR4_MOUSE (E3 ubiquitin-protein ligase UBR4 OS=Mus musculus GN=Ubr4 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.057e-38 Identity = 105/296 (35.47%), Postives = 150/296 (50.68%), Query Frame = 1 Query: 1 WSLGLKLPSVPHILSMLRGLSMGHLATQRCIDEGGILPLLHALEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVPIAQYVRYVDQYWDNLNALGRADGSRLRLLTYDICLMLARFATGASFSAKNKGGGKRKQLQV 888 W L P++P IL +LRGL+M H ATQ I I L H LE VS + IG AENLL+ L + +K+ R TR E +R+A+ R++ L LGM ++ G+ VV + C +CREGY +PT +LG+Y+++KRV L R + Y+TVS+FNI+H+ CH A R L ++EWE A L+N + CN L PV GP VP + + + ++ L +L +DI L+ RFA SFSA GGG+ + + Sbjct: 4707 WKKFLSRPALPFILRLLRGLAMQHPATQVLIGTDSITSL-HKLEQVSSDEGIGTLAENLLEALREHPD-----VNKKIDAARRETRAEKKRMAMAMRQKALGTLGMT---TNEKGQ--VVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVAL-EEMENKPRKQQGYSTVSHFNIVHYDCHLAAVR----LARGREEWESAALQNANTKCNGLLPVWGPHVPESAFATCLARHNTYLQECTGQREPTYQLNIHDIKLLFLRFAMEQSFSADTGGGGRESNIHL 4986
BLAST of DY304398 vs. ExPASy Swiss-Prot
Match: UBR4_HUMAN (E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens GN=UBR4 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.803e-38 Identity = 104/296 (35.14%), Postives = 150/296 (50.68%), Query Frame = 1 Query: 1 WSLGLKLPSVPHILSMLRGLSMGHLATQRCIDEGGILPLLHALEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVPIAQYVRYVDQYWDNLNALGRADGSRLRLLTYDICLMLARFATGASFSAKNKGGGKRKQLQV 888 W L P++P IL +LRGL++ H TQ I I P LH LE VS + IG AENLL+ L + +K+ R TR E +R+A+ R++ L LGM ++ G+ VV + C +CREGY +PT +LG+Y+++KRV L R + Y+TVS+FNI+H+ CH A R L ++EWE A L+N + CN L PV GP VP + + + ++ L +L +DI L+ RFA SFSA GGG+ + + Sbjct: 4710 WKKFLSRPALPFILRLLRGLAIQHPGTQVLIGTDSI-PNLHKLEQVSSDEGIGTLAENLLEALREHPD-----VNKKIDAARRETRAEKKRMAMAMRQKALGTLGMT---TNEKGQ--VVTKTALLKQMEELIEEPGLTCCICREGYKFQPTKVLGIYTFTKRVAL-EEMENKPRKQQGYSTVSHFNIVHYDCHLAAVR----LARGREEWESAALQNANTKCNGLLPVWGPHVPESAFATCLARHNTYLQECTGQREPTYQLNIHDIKLLFLRFAMEQSFSADTGGGGRESNIHL 4989
BLAST of DY304398 vs. ExPASy Swiss-Prot
Match: POE_DROME (Protein purity of essence OS=Drosophila melanogaster GN=poe PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.866e-35 Identity = 99/287 (34.49%), Postives = 148/287 (51.57%), Query Frame = 1 Query: 22 PSVPHILSMLRGLSMGHLATQRCIDEGGILPLLHALEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVPIAQYVRYVDQYWDNLNALGRADGSRLRLLTYDICLMLARFATGASFSAKNKGGGKRKQL 882 PS+ +IL L GLS H ATQ I + I+P++H LE VS + +G+ AENLL+ LS D +V +R TR E +RLA+ RE+ L LGMR ++ G+ V A+ C +CREGY+ +P +LG+Y+++KR N+ S R YTTV++FN++H CH A R L + EWE A+L+N + CN L P+ GP+V A + + ++ + + +D+ L+L RFA SF GGG + + Sbjct: 4845 PSLKYILRFLTGLSNHHEATQVAISKD-IIPIIHRLEQVSSDEHVGSLAENLLEALST-----DSATAARVQQVRDFTRAEKKRLAMATREKQLDALGMR---TNEKGQ--VTAKGSILQKIEKLRDETGLTCFICREGYACQPDKVLGIYTFTKRCNVEEFELKS-RKTIGYTTVTHFNVVHVDCHTSAIR----LTRGRDEWERASLQNANTRCNGLLPLWGPAVGEAAFSACMTRHSSYMQESTQRCDISYTSSVHDLKLLLVRFAWERSFHDDAGGGGPQSNM 5115
BLAST of DY304398 vs. ExPASy Swiss-Prot
Match: POE_DROPS (Protein purity of essence OS=Drosophila pseudoobscura pseudoobscura GN=poe PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 4.156e-35 Identity = 99/287 (34.49%), Postives = 147/287 (51.22%), Query Frame = 1 Query: 22 PSVPHILSMLRGLSMGHLATQRCIDEGGILPLLHALEGVSGENEIGARAENLLDTLSNKEGKGDGFLEEKVSMLRHATRDEMRRLALRKREQLLQGLGMRQELASDGGERIVVAQPIXXXXXXXXXXXXXXACMVCREGYSLRPTDLLGVYSYSKRVNLGGGTSGSARGECVYTTVSYFNIIHFQCHQEAKRADAALKNPKKEWEGATLRNNESLCNSLFPVRGPSVPIAQYVRYVDQYWDNLNALGRADGSRLRLLTYDICLMLARFATGASFSAKNKGGGKRKQL 882 PS+ +IL L GLS H ATQ I + I+P++H LE VS + +G+ AENLL+ LS D +V +R TR E +RLA+ RE+ L LGMR ++ G+ V A+ C +CREGY+ +P +LG+Y+++KR N+ S R YTTV++FN++H CH A R L + EWE A+L+N + CN L P+ GPSV + + ++ + + +D+ L+L RFA SF GGG + + Sbjct: 4904 PSLKYILRFLTGLSNHHEATQVAISKD-IIPIIHRLEQVSSDEHVGSLAENLLEALST-----DAATAARVQQVRDFTRAEKKRLAMATREKQLDALGMR---TNEKGQ--VTAKGSILQKIEKLRDETGLTCFICREGYACQPEKVLGIYTFTKRCNVEEFELKS-RKTIGYTTVTHFNVVHVDCHTSAIR----LTRGRDEWERASLQNANTRCNGLLPLWGPSVLETTFSASMTRHSSYMQESTQRCDISYTSSIHDLKLLLVRFAWERSFHDDAGGGGPQSNM 5174 The following BLAST results are available for this feature:
BLAST of DY304398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304398 ID=DY304398; Name=DY304398; organism=Citrus clementina; type=EST; length=1273bpback to top |