DY304401

Overview
NameDY304401
Unique NameDY304401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1262
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.465e-31
Identity = 68/154 (44.16%), Postives = 90/154 (58.44%), Query Frame = 2
Query:  578 EKLPD----LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELIPXXXXXXXXXXXXMLTKGQNSLEMFSQQTSSTD-LKRQGQIFLVSQWKKKAP 1024
            +++PD    L    FVLVHG GFGAWCWYK +A LEE G     +DLTG G +  DTN +++L +Y KPL D LE LP+ EKVILVGH  GGA ISYA+E  P            M++ GQ   ++FS++  S +   ++ Q  +    K K P
Sbjct:   84 KQVPDFSESLIVKKFVLVHGEGFGAWCWYKMVASLEESGLSPVTVDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRPFDVFSEELGSAERFMKESQFLIYGNGKDKPP 237          

HSP 2 Score: 22.7126 bits (47), Expect = 2.465e-31
Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 3
Query: 1005 NGKKKPPTAY*SLKNHL 1055
            NGK KPPT +   K H+
Sbjct:  231 NGKDKPPTGFMFEKPHM 247          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.303e-20
Identity = 45/86 (52.33%), Postives = 54/86 (62.79%), Query Frame = 2
Query:  605 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAM 862
            HFV VHG   GAWCWYK   LL+  GFK T++DLTGAGI   D+N +    QY +PL   L  LP   KVILVGH  GG  ++ A+
Sbjct:   12 HFVFVHGASHGAWCWYKLTTLLDAAGFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVILVGHSIGGGSVTEAL 97          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.416e-19
Identity = 42/86 (48.84%), Postives = 53/86 (61.63%), Query Frame = 2
Query:  605 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAM 862
            HFV VHG   GAWCWYK   LL   GFK T++DLTGAGI+  D+N +     Y +PL   L  LP   K++LVGH  GG  ++ A+
Sbjct:   13 HFVFVHGASHGAWCWYKLTTLLVAAGFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIVLVGHSIGGGSVTEAL 98          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.382e-19
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 2
Query:  596 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELIP 874
            +  HFVLVHGG  GAW WYK   LLE  G KVTA+DL+ AGI+    + I +   Y +PL + +  +P  EKV+L+GH FGG  +  AME  P
Sbjct:    9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYP 101          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.326e-17
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 2
Query:  605 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELIP 874
            HFV VHG G GAWCWY+ +A L   G + TA+D+  AG H    + + SL +Y +PL D +      E+++LVGH  GG  ++ AME  P
Sbjct:    7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFP 96          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.326e-17
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 2
Query:  605 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELIP 874
            HFV VHG G GAWCWY+ +A L   G + TA+D+  AG H    + + SL +Y +PL D +      E+++LVGH  GG  ++ AME  P
Sbjct:    7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFP 96          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 1.791e-14
Identity = 41/89 (46.07%), Postives = 51/89 (57.30%), Query Frame = 2
Query:  599 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAME 865
            T HFVL+H    GAW W+K    LE  G KVTA+D+  +GI       I S  +Y +PL  FLEKLP  EKVI+VG    G  I+ A +
Sbjct:    3 TAHFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVIIVGESCAGLNIAIAAD 91          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.340e-14
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 2
Query:  605 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFL-EKLPDAEKVILVGHDFGGACISYAMELIP 874
            HF+LVHG   GAWCWY+ +A L   G + TA+D+  +G H    + + +  +Y +PL D +       E+++LVGH  GG  ++ AME  P
Sbjct:   10 HFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFP 100          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.340e-14
Identity = 35/91 (38.46%), Postives = 53/91 (58.24%), Query Frame = 2
Query:  605 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFL-EKLPDAEKVILVGHDFGGACISYAMELIP 874
            HF+LVHG   GAWCWY+ +A L   G + TA+D+  +G H    + + +  +Y +PL D +       E+++LVGH  GG  ++ AME  P
Sbjct:   10 HFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFP 100          
BLAST of DY304401 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.991e-14
Identity = 42/87 (48.28%), Postives = 51/87 (58.62%), Query Frame = 2
Query:  605 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAME 865
            HFVL+H    GAW W+K   LLE  G KVTA+DL  +G+       I S  +Y +PL  FLE LP  EKVILVG   GG  I+ A +
Sbjct:    5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAAD 91          
The following BLAST results are available for this feature:
BLAST of DY304401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
Y1399_ARATH2.465e-3144.16Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PPD_ARATH8.303e-2052.33Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
PPD_RAPSA2.416e-1948.84Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PNAE_RAUSE5.382e-1948.39Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
PIR7A_ORYSJ1.326e-1743.33Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI1.326e-1743.33Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
HNL_MANES1.791e-1446.07Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
PIR7B_ORYSJ2.340e-1438.46Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI2.340e-1438.46Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
HNL_HEVBR3.991e-1448.28Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ8YJ15RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304401 ID=DY304401; Name=DY304401; organism=Citrus clementina; type=EST; length=1262bp
ACTTGAAGCAGTTCCAGGCCATCACATTCACATCCCCTAAATTTCACCTG
ACTTTCCTCTTTCTTTCTCTCTGCAAATACATTTAAACGGAGTGGCGTAG
TAGTATTAATTATAATTGTAATCAATTTGCATATACATGTGTATATCTTT
ATTTATCTCTTGACATGCACCAGCGAAAATGGGAAATTTTTGCACATGTT
TGGTACCCAAAACACCTCCTGTGAAGGGAAAACAGAGCCAGAGACCTGCA
AAGAGGTTGACAAACCCGGGTGGCCCTGCTACTGTGGCTAACACCAGCAA
CAGGTGGAGTAGAATCCGATCGGGTTCACGCAAGGAGAAAGAGAATTTTG
ATGATGCTTTGATCCAAGAGCAGGCTTTGGCTGCTGCTATCTTGTTTCGT
CAGCACCAGCAACAGCAGAATGGATTGGGATTGCCCTTTGATCGCTCTGC
TTCTTTGAGATATCCTAACGGTTCCAGCTCCAAAAAGACCCAGCTCCCCC
GCAGCTCCAGTTCCCGTGCCCGCTCCCTCACTGACCCCCTTTTGCAGCCT
CACCAGCTTCTTAACCTCAACCGGGATGAGAAGCTCCCTGATCTAGAAAC
CAACCATTTTGTCCTTGTCCATGGAGGAGGCTTTGGTGCTTGGTGTTGGT
ATAAAACTATAGCACTTTTAGAAGAAGGTGGCTTCAAAGTTACTGCCATT
GACTTGACTGGTGCAGGGATTCACTCATTTGATACGAATGGCATTACCAG
CCTGTCGCAATATGTGAAGCCACTTACTGATTTTCTTGAAAAACTCCCTG
ATGCAGAGAAGGTGATTTTGGTTGGACATGATTTTGGTGGAGCGTGTATA
TCATACGCTATGGAGTTAATTCCTTTTTAAATCTCCTAGGCTGTTTTTAT
TGCAGCAGCAATGTTGACTAAAGGACAAAATTCTCTTGAAATGTTCTCTC
AACAGACAAGCTCCACTGATTTGAAGCGACAGGGTCAAATATTTTTGGTA
AGCCAATGGAAAAAAAAAGCCCCCCACTGCCTATTGATCCTTGAAAAATC
ATTTGTTGAAAAAAATTGGTTGTTCCACCCAAAATTCCTGCAAAAGGGAA
TAACCAAATTAACTTTCGGTTTTAATTGGAAAAAACAATCCCCCCTTTTG
GTCTCCCCTTTTTTTGGGAAAAAAACCTATTTCTTCTTCTCCTGAAAAAG
TGAAAAAAAAATATGGAAAAATTCTTTGTGGAGAGGGGGCCGAAATTTTT
TCCTTATATATA
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