DY304404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3B_RAT (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus GN=Idh3B PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 5.459e-83 Identity = 160/277 (57.76%), Postives = 201/277 (72.56%), Query Frame = 1 Query: 64 ITRNVFRALAQGAQ--LSKGLHSSAVNADKNQQTEKEGRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEV-NPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 +TR V A GA L + A + + Q EG T++PGDGVGPEL+++V+EVFKAA +PV+F+ SEV N LE V++S+ NK+ I G + TP + GEL + +M+LR LDL+ANVVHVKSLP K+RHN++D +IIREQTEGEYS+LEHE GV+ECLKI+T KS+RIAKFAFDYA K GR KVTAVHKANIMKLGDGLFL+ CEE+A+LYP+I FE MI+DNC +Q+V NP FDV V PN Y +I+DNLA+GLV Sbjct: 10 LTRAVLGARNSGAWRGLRTAASAQAASQSQAQDVRVEGAFPVTMLPGDGVGPELMHAVKEVFKAAAVPVEFKEHHLSEVQNMASEEKLEQVLSSMKENKVAIIGKIYTP-MEYKGELASYDMQLRRKLDLFANVVHVKSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESARGVIECLKIVTRTKSQRIAKFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLV 285
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3B_BOVIN (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos taurus GN=IDH3B PE=2 SV=2) HSP 1 Score: 308.531 bits (789), Expect = 5.459e-83 Identity = 159/277 (57.40%), Postives = 203/277 (73.29%), Query Frame = 1 Query: 64 ITRNVFRALAQGA--QLSKGLHSSAVNADKNQQTEKEGRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEV-NPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 +TR + A GA L + A + + + EG T++PGDGVGPEL+++V+EVFKAA++PV+F+ SEV N LE V++S+ NK+ I G + TP + GEL + +M+LR LDL+ANVVHVKSLP K+RHN++D +IIREQTEGEYS+LEHE GV+ECLKI+T KS+RIAKFAFDYA K GR KVTAVHKANIMKLGDGLFL+ CEE+A+LYP+I FEKMI+DNC +Q+V NP FDV V PN Y +I+DNLA+GLV Sbjct: 10 LTRALVAAPNPGAWRSLCTSTVAQASSRTQGEDVRVEGAFPVTMLPGDGVGPELMHAVKEVFKAASVPVEFQEHHLSEVQNMASEEKLEQVLSSMKENKVAIIGKIHTP-MEYKGELASYDMRLRRKLDLFANVVHVKSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESARGVIECLKIVTRTKSQRIAKFAFDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFEKMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLV 285
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3B_CAEEL (Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C37E2.1 PE=1 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 2.074e-82 Identity = 158/264 (59.85%), Postives = 198/264 (75.00%), Query Frame = 1 Query: 130 AVNADKNQQ---------TEKEGRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEVNPTLSAPLEDVVNSIARNK-ICIKGILATPDFSHT-GELQTLNMKLRNALDLYANVVHVKSLPNVKSRHN-DVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 AVNA ++Q TE ++K T+IPGDGVGPEL+Y+VQ++ K IP++FE F SEV+ T S+ +E+ V SI RN + +KG + HT GELQ LNM+LR +LDL+ANVVH+K+L +K+RH +D +I+REQTEGEYS+LEHE VPGV+ECLKI T K+ERIAKFAFDYA K GRKKVTAVHKANIMKLGDGLFLR+CE +AK YP+I FE MI+DN +Q+VS P FDV V PN Y +I+DNLA+GLV Sbjct: 19 AVNAASSRQYSITAPRPPTELNQKLKVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYTRSSSIENAVESIGRNNNVALKGAIEESAVLHTEGELQGLNMRLRRSLDLFANVVHIKTLDGIKTRHGKQLDFVIVREQTEGEYSSLEHELVPGVIECLKISTRTKAERIAKFAFDYATKTGRKKVTAVHKANIMKLGDGLFLRTCEGVAKQYPKIQFESMIIDNTCMQLVSKPEQFDVMVMPNLYGNIIDNLAAGLV 282
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3B_MACFA (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Macaca fascicularis GN=IDH3B PE=2 SV=2) HSP 1 Score: 306.22 bits (783), Expect = 2.709e-82 Identity = 159/277 (57.40%), Postives = 202/277 (72.92%), Query Frame = 1 Query: 64 ITRNVFRALAQGAQ--LSKGLHSSAVNADKNQQTEKEGRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEV-NPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 +TR + A GA LS + A + + + EG T++PGDGVGPEL+++V+EVFKAA +PV+F+ SEV N LE V++S+ NK+ I G + TP + GEL + +M+LR LDL+ANVVHVKSLP +RHN++D +IIREQTEGEYS+LEHE GV+ECLKI+T AKS+RIAKFAFDYA K GR KVTAVHKANIMKLGDGLFL+ CEE+A+LYP+I FE MI+DNC +Q+V NP FDV V PN Y +I+DNLA+GLV Sbjct: 10 LTRALVSAGNPGAWRGLSTSAAAHAASRSQAEDVRVEGSFPVTMLPGDGVGPELMHAVKEVFKAAAVPVEFQEHHLSEVQNMASEEKLEQVLSSMKENKVAIIGKIHTP-MEYKGELASYDMRLRRKLDLFANVVHVKSLPGYMTRHNNLDLVIIREQTEGEYSSLEHESARGVIECLKIVTRAKSQRIAKFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLV 285
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3B_HUMAN (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Homo sapiens GN=IDH3B PE=1 SV=2) HSP 1 Score: 305.449 bits (781), Expect = 4.621e-82 Identity = 159/277 (57.40%), Postives = 202/277 (72.92%), Query Frame = 1 Query: 64 ITRNVFRALAQGAQ--LSKGLHSSAVNADKNQQTEKEGRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEV-NPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 +TR + A GA LS + A + + + EG T++PGDGVGPEL+++V+EVFKAA +PV+F+ SEV N LE V++S+ NK+ I G + TP + GEL + +M+LR LDL+ANVVHVKSLP +RHN++D +IIREQTEGEYS+LEHE GV+ECLKI+T AKS+RIAKFAFDYA K GR KVTAVHKANIMKLGDGLFL+ CEE+A+LYP+I FE MI+DNC +Q+V NP FDV V PN Y +I+DNLA+GLV Sbjct: 10 LTRALVSAGNPGAWRGLSTSAAAHAASRSQAEDVRVEGSFPVTMLPGDGVGPELMHAVKEVFKAAAVPVEFQEHHLSEVQNMASEEKLEQVLSSMKENKVAIIGKIHTP-MEYKGELASYDMRLRRKLDLFANVVHVKSLPGYMTRHNNLDLVIIREQTEGEYSSLEHESARGVIECLKIVTRAKSQRIAKFAFDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLV 285
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3B_PONAB (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Pongo abelii GN=IDH3B PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 1.487e-80 Identity = 157/277 (56.68%), Postives = 200/277 (72.20%), Query Frame = 1 Query: 64 ITRNVFRALAQGAQ--LSKGLHSSAVNADKNQQTEKEGRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEV-NPTLSAPLEDVVNSIARNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 +TR + A GA LS + A + + + EG T++PGDGVGPEL+++V+EVFKAA +PV+F+ SEV N LE V++S+ NK+ I G + TP + GEL + +M+LR LDL+ANVVHVKSLP +RHN++D +IIREQTEGE S+LEHE GV+ECLKI+T AKS+RIAKFAFDYA K GR KV AVHKANIMKLGDGLFL+ CEE+A+LYP+I FE MI+DNC +Q+V NP FDV V PN Y +I+DNLA+GLV Sbjct: 10 LTRALVSAGNPGAWRGLSTSAAAHAASRSQAEDVRVEGSFPVTMLPGDGVGPELMHAVKEVFKAAAVPVEFQEHHLSEVQNMASEEKLEQVLSSMKENKVAIIGKIHTP-MEYKGELASYDMRLRRKLDLFANVVHVKSLPGYMTRHNNLDLVIIREQTEGECSSLEHESARGVIECLKIVTRAKSQRIAKFAFDYATKKGRSKVIAVHKANIMKLGDGLFLQCCEEVAELYPKIKFETMIIDNCCMQLVQNPYQFDVLVMPNLYGNIIDNLAAGLV 285
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3G_BOVIN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos taurus GN=IDH3G PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 4.960e-68 Identity = 138/242 (57.02%), Postives = 177/242 (73.14%), Query Frame = 1 Query: 169 GRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEVNPTLSAPLEDVVNSIA---RNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 GR T+IPGDG+GPEL+ V+ VF+ A +PVDFE EV+ + +A ED+ N+I RN++ +KG + T + + ++ N LR +LDLYANV+H KSLP V +RH D+D +I+RE TEGEYS+LEHE V GVVE LKIIT AKS RIA++AF A + GRKKVTAVHKANIMKLGDGLFL+ C E+A YP+ITFE MI+DN T+Q+VS P FDV V PN Y +IV+N+ +GLV Sbjct: 52 GRHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFE-----EVHVSSTADEEDIRNAIMAIRRNRVALKGNIET-NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHRDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFQLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLV 287
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3G_MACFA (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 6.478e-68 Identity = 138/242 (57.02%), Postives = 177/242 (73.14%), Query Frame = 1 Query: 169 GRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEVNPTLSAPLEDVVNSIA---RNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 GR T+IPGDG+GPEL+ V+ VF+ A +PVDFE EV+ + +A ED+ N+I RN++ +KG + T + + ++ N LR +LDLYANV+H KSLP V +RH D+D +I+RE TEGEYS+LEHE V GVVE LKIIT AKS RIA++AF A + GRKKVTAVHKANIMKLGDGLFL+ C E+A YP+ITFE MI+DN T+Q+VS P FDV V PN Y +IV+N+ +GLV Sbjct: 15 GRHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFE-----EVHVSSNADEEDIRNAIMAIRRNRVALKGNIET-NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLV 250
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3G_HUMAN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo sapiens GN=IDH3G PE=1 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 6.478e-68 Identity = 138/242 (57.02%), Postives = 177/242 (73.14%), Query Frame = 1 Query: 169 GRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEVNPTLSAPLEDVVNSIA---RNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 GR T+IPGDG+GPEL+ V+ VF+ A +PVDFE EV+ + +A ED+ N+I RN++ +KG + T + + ++ N LR +LDLYANV+H KSLP V +RH D+D +I+RE TEGEYS+LEHE V GVVE LKIIT AKS RIA++AF A + GRKKVTAVHKANIMKLGDGLFL+ C E+A YP+ITFE MI+DN T+Q+VS P FDV V PN Y +IV+N+ +GLV Sbjct: 53 GRHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFE-----EVHVSSNADEEDIRNAIMAIRRNRVALKGNIET-NHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFENMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLV 288
BLAST of DY304404 vs. ExPASy Swiss-Prot
Match: IDH3G_RAT (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Rattus norvegicus GN=Idh3g PE=2 SV=2) HSP 1 Score: 256.914 bits (655), Expect = 1.885e-67 Identity = 137/242 (56.61%), Postives = 176/242 (72.73%), Query Frame = 1 Query: 169 GRIKCTLIPGDGVGPELVYSVQEVFKAANIPVDFESFFFSEVNPTLSAPLEDVVNSIA---RNKICIKGILATPDFSHTGELQTLNMKLRNALDLYANVVHVKSLPNVKSRHNDVDCIIIREQTEGEYSALEHEGVPGVVECLKIITAAKSERIAKFAFDYAVKMGRKKVTAVHKANIMKLGDGLFLRSCEEMAKLYPRITFEKMILDNCTLQMVSNPNPFDVRVTPNPYRHIVDNLASGLV 885 GR T+IPGDG+GPEL+ V+ VF+ A +PVDFE EV+ + +A ED+ N+I RN++ +KG + T + ++ N LR +LDLYANV+H KSLP V +RH D+D +I+RE TEGEYS+LEHE V GVVE LKIIT AKS RIA++AF A + GRKKVTAVHKANIMKLGDGLFL+ C E+A YP+ITF+ MI+DN T+Q+VS P FDV V PN Y +IV+N+ +GLV Sbjct: 53 GRHTVTMIPGDGIGPELMLHVKSVFRHACVPVDFE-----EVHVSSNADEEDIRNAIMAIRRNRVALKGNIET-NHDLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVAARYPQITFDSMIVDNTTMQLVSRPQQFDVMVMPNLYGNIVNNVCAGLV 288 The following BLAST results are available for this feature:
BLAST of DY304404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304404 ID=DY304404; Name=DY304404; organism=Citrus clementina; type=EST; length=1292bpback to top |