DY304407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 1.362e-38 Identity = 87/159 (54.72%), Postives = 120/159 (75.47%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVAREGAIPPLVALSQSGTNRAKQKV 482 LS +EENKI IG+SGAI PLV LL NG RGKKDA+TAL++L +ENK VQ+GA++ L++LM D ++ MVDK+ V++ L T+ E + ++ +EGGIP+LVE++E+G+ R KE A A LLQ+ S + +V +EGA+PPLVALSQSGT RA++KV Sbjct: 651 LSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKV 808
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 3.710e-36 Identity = 84/158 (53.16%), Postives = 113/158 (71.52%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVAREGAIPPLVALSQSGTNRAKQK 479 LS +EE K IG +GAI PLV LL +G + GKKDA+TAL++L ENK + ++AGA++ LVELM D + MV+K+ V++ L T+ E K ++ EEGGIPVLVE++E+G+ R KE A A LLQ+C S + V REG IPPLVAL++SGT R K+K Sbjct: 532 LSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM-DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEK 688
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 1.010e-33 Identity = 84/159 (52.83%), Postives = 114/159 (71.70%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGA-IPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVAREGAIPPLVALSQSGTNRAKQK 479 LS L+ N+ IG+S A I LV+LL G RGKKDA++AL++L +NK R VQA A+K LVEL+ D MVDK+ +++ L + E + ++V EGGIP+LVE +++G+QR KE A ++LLQ+C S + TLV +EGAIPPLVALSQSGT RAK+K Sbjct: 582 LSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEK 739
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 6.129e-31 Identity = 73/161 (45.34%), Postives = 109/161 (67.70%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSN-MVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVAREGAIPPLVALSQSGTNRAKQKVI 485 LS +ENKI+IG SGAIP LV LLENG RGKKDA+TAL++LC NK RAV+AG + LV++++D + + MVD++ ++S+L +AK+++V+ +P L+ I++ R +E A AILL +C+ + R GA+ PL+ LS++GT R K+K I Sbjct: 441 LSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAI 601
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 8.004e-31 Identity = 74/159 (46.54%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSS-NMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVAREGAIPPLVALSQSGTNRAKQK 479 LS +ENKI+IG SGAI LV LL+ G VRGKKDA+TAL++LC + NK RAV+AG +KPLV+++ D SS M D++ ++S+L + AKT+++ IP L++ ++ R +E A AILL +C+ + R GA+ PL+ LS+ GT RAK+K Sbjct: 452 LSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRK 610
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.042e-30 Identity = 76/159 (47.80%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVARE-GAIPPLVALSQSGTNRAKQK 479 LS ++ENK+ IG +GAI L+SLLE G RGKKDA+TA+++LC + NK RAV+ G + PL L+ D MVD++ ++++L T E KT++ E IPVLVEII G+ R +E A AIL +C + + R VARE GA L L+++GT+RAK+K Sbjct: 455 LSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYLCIGN-IERLNVAREVGADVALKELTENGTDRAKRK 612 HSP 2 Score: 68.9366 bits (167), Expect = 7.045e-11 Identity = 43/145 (29.66%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 21 ENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVY---RTLVAREGAIPPLVAL 446 +N++ I +GAIP LV LL + R ++ + TAL +L + NK V AGA+ +VE++ + S + +A + L + E K ++ G I L+ ++E GT+R K+ A + +C +Y ++ + G + PL L Sbjct: 378 DNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLC----IYQGNKSRAVKGGIVDPLTRL 518
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 7.012e-27 Identity = 62/158 (39.24%), Postives = 104/158 (65.82%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVAREGAIPPLVALSQSGTNRAKQK 479 LS ++ENK+ IG +GAIPPLV+LL G RGKKDA+TAL++LC + NK +AV+AG + L+ L+ + S MVD+S ++++L + + K+ + +PVLV+ I G+ R KE + A+L+ +C + + + G + L+ ++++GT+R K+K Sbjct: 467 LSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRK 624
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.196e-26 Identity = 63/158 (39.87%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVAREGAIPPLVALSQSGTNRAKQK 479 LS ++ENK+ IG GAIPPLV LL G RGKKDA+TAL++LC + NK +A++AG + L L+ + S MVD++ ++++L + E K + +P LVE I G+ R +E A A+L+ +C + + G + PL+ L+ +GT+R K+K Sbjct: 462 LSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRK 619 HSP 2 Score: 70.4774 bits (171), Expect = 2.421e-11 Identity = 64/219 (29.22%), Postives = 105/219 (47.95%), Query Frame = 3 Query: 21 ENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVY---RTLVAREGAIPPLV-ALSQSGTNRAKQKVIIFRFFFLCLWSVIESLPAADMAGNEIIPRSCALFSIVFDFQQTRTLFCHVTAACLSFNLC 665 +N++ I +GAIP LV LL R ++ + TAL +L + NK V AGA+ +V+++ S + +A + L + E K ++ G IP LV ++ GTQR K+ A L +C +Y + R G IP L L++ G+ + L + +++ S P G II S A+ S+V +F +T + AA + +LC Sbjct: 385 DNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLC----IYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEA--------LAILAILSSHP----EGKAIIGSSDAVPSLV-EFIRTGSPRNRENAAAVLVHLC 586
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 4.545e-26 Identity = 64/158 (40.51%), Postives = 99/158 (62.66%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVYRTLVAREGAIPPLVALSQSGTNRAKQK 479 LS L+ENK+ IG S IPPLV LL++G +RGKKDA TAL++L NK RA+ AG ++PL+ L+ D + M+D++ ++ LL + E + ++ + I LVE I GT + KE A ++LL++ + + + G LV ++ SGTNRA++K Sbjct: 489 LSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRK 646
BLAST of DY304407 vs. ExPASy Swiss-Prot
Match: SL11_ORYSJ (Protein spotted leaf 11 OS=Oryza sativa subsp. japonica GN=SPL11 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 3.601e-23 Identity = 62/162 (38.27%), Postives = 101/162 (62.35%), Query Frame = 3 Query: 6 LSQLEENKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVC--EESVVYRTLVAREGAIPPLVALSQSGTNRAKQKVI 485 LS ++E K+ IG GAIP LV LL G RGKKDA+ AL++LC + NK RA++AG + ++ L+ + + ++D++ ++S+L + E K ++ +PVLVE+I GT R +E A A++L +C E +V+ G + PL L+ +GT+R K+K + Sbjct: 477 LSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAV 638 HSP 2 Score: 71.633 bits (174), Expect = 1.087e-11 Identity = 46/149 (30.87%), Postives = 80/149 (53.69%), Query Frame = 3 Query: 24 NKILIGRSGAIPPLVSLLENGGVRGKKDASTALYSLCSGKENKIRAVQAGAMKPLVELMADFSSNMVDKSAYVMSLLVTLSEAKTSLVEEGGIPVLVEIIEVGTQRQKEIAVAILLQVCEESVVY---RTLVAREGAIPPLVALSQSGT 461 N+I I +GAIP L+SLL + +R ++ A TAL +L ++NK + +GA+ +V ++ + S + +A + L + E K ++ G IP LV ++ G+QR K+ A A L +C +Y + R G +P ++ L + T Sbjct: 401 NRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLC----IYQGNKGRAIRAGLVPLIMGLVTNPT 545 The following BLAST results are available for this feature:
BLAST of DY304407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304407 ID=DY304407; Name=DY304407; organism=Citrus clementina; type=EST; length=1262bpback to top |