DY304418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304418 vs. ExPASy Swiss-Prot
Match: POF21_ARATH (Probable transcription factor PosF21 OS=Arabidopsis thaliana GN=POSF21 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 5.415e-62 Identity = 138/217 (63.59%), Postives = 149/217 (68.66%), Query Frame = 3 Query: 3 LLSMYLDMDKFNASTATSGFQVXXXXXXXXXXXXXXXXXXXXXXXXENVGVGSTERPRIRHQHSQSMDGSTSIKPEMLMSASDEXXXXXXXXXXXXXXXXXXXXIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAMPNGGPMMNYPSF 653 LLSMYLDMDKFN+S ATS QV +N ERPRIRHQHSQSMDGS +I EMLMS +++ IDPKRAKRIWANRQSAARSKERK RYI ELERKVQTLQTEAT+LSAQLTLLQRDTNGLT EN+ELKLRLQTMEQQVHLQD LN+ALKEEIQHLKVLTGQ P+ +NY SF Sbjct: 98 LLSMYLDMDKFNSS-ATSSAQVGEPSGTAWKNETMMQTGTGSTSNPQNTVNSLGERPRIRHQHSQSMDGSMNIN-EMLMSGNEDDSAIDAKKSMSATKLAELALIDPKRAKRIWANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVENNELKLRLQTMEQQVHLQDELNEALKEEIQHLKVLTGQVAPSA---LNYGSF 309
BLAST of DY304418 vs. ExPASy Swiss-Prot
Match: RF2A_ORYSJ (Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 9.581e-51 Identity = 118/217 (54.38%), Postives = 132/217 (60.83%), Query Frame = 3 Query: 3 LLSMYLDMDKFNASTATSGFQVXXXXXXXXXXXXXXXXXXXXXXXXENVGVGSTERPRIRHQHSQSMDGSTSIKPEMLMSAS---DEXXXXXXXXXXXXXXXXXXXXIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAMPNGGPMMNY 644 L SM+LD++K N++ S + R +HQHS SMD S SIK E L+ AS + +DPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEAT+LSAQL LLQRDT+GLT ENSELKLRLQTMEQQVHLQDALND LK E+Q LKV TGQ GG MMN+ Sbjct: 85 LFSMFLDVEKLNSTCGASS------------EAEAESSSAGAAAAVAAAAAAAAHGARPKHQHSLSMDESMSIKAEELVGASPGTEGMSSAEAKKAVSAAKLAELALVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLALLQRDTSGLTTENSELKLRLQTMEQQVHLQDALNDTLKSEVQRLKVATGQMANGGGMMMNF 289
BLAST of DY304418 vs. ExPASy Swiss-Prot
Match: RF2B_ORYSJ (Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.826e-40 Identity = 89/147 (60.54%), Postives = 104/147 (70.75%), Query Frame = 3 Query: 171 PRIRHQHSQSMDGSTSIKPEMLMSASDEXXXXXXXXXXXXXXXXXXXXIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQ 611 PR +H+HS S+DGS +A+ IDPKRAKRI ANRQSAARSKERK RYI ELERKVQTLQTEAT+LSAQLTL QRDT GL+AEN+ELK+RLQ MEQQ L+DALNDALK+E++ LK+ TG+ Sbjct: 83 PRPKHRHSSSVDGSGFFAAARKDAAASLAEVMEAKKAMTPEQLSDLAAIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQELERLKLATGE 229 The following BLAST results are available for this feature:
BLAST of DY304418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304418 ID=DY304418; Name=DY304418; organism=Citrus clementina; type=EST; length=655bpback to top |