DY304423

Overview
NameDY304423
Unique NameDY304423
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1275
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304423 vs. ExPASy Swiss-Prot
Match: RDS1_SCHPO (Protein rds1 OS=Schizosaccharomyces pombe GN=rds1 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 1.243e-55
Identity = 113/207 (54.59%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:  404 YNTNGMLTQP-EPAPYIPAGGLGTNGSLPRYMVESDFDYESITLGLYQEWIELDTFNNGLATFSEEDFIAAGLTAEDRELIRFMAQQEEGHATLLTNMLGHTAPPQCTYNYPYTTVREFLDFNQKLTRYGESGVWGFINHLDSREVGQLLAQSIATEGRQQMAFRQMSGLFPLPVYFETGIPHSWAWTFLCSLNFPLALPTPTPSRK 1021
            Y   G   Q   PA + PAGG+ TN S P Y   SDFDY+S++L LY E+IE D FN GL  FS+ +F  AG+ AE R LIRFMAQQE GH  L+TNMLG  AP  C+Y Y + TV  F+DF Q LT++ ESGV+GF+ HLDSR    LL QSI TE RQQM+ RQ+ GLFP PV+FETGIP S+AW    SL  P  +  P  + K
Sbjct:   41 YTATGSFNQSIMPANFTPAGGIDTNDSSPTYHPFSDFDYQSLSLALYHEYIEYDLFNYGLTKFSDAEFDEAGIDAEYRHLIRFMAQQEIGHIELVTNMLGPNAPKACSYQYNFDTVGSFIDFAQTLTKWSESGVYGFLPHLDSRAAAALLLQSITTEARQQMSLRQLQGLFPYPVWFETGIPQSFAW----SLIAPFIVGCPAENEK 243
The following BLAST results are available for this feature:
BLAST of DY304423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RDS1_SCHPO1.243e-5554.59Protein rds1 OS=Schizosaccharomyces pombe GN=rds1 ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ8YK14RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304423 ID=DY304423; Name=DY304423; organism=Citrus clementina; type=EST; length=1275bp
CACGATGTTCTCCAAGTCAATCGTCGCCTCAGCCCTGCTTGTAGGTGCTG
CATGTGCCGCTCCTGCTCCTCAGGACATCTACGCCTCTCAGGCCACCTCT
GAGTATGGCAGCCAGGTTTCTGGCTACACCGGTGCCAACGCCCCTTACAA
GTCGGACGCTGCCTCCGTCGACCTTGAGAACATTGCCACCTCTTTCGGCA
CCAACTCTCAGGTCAATGCCATCCCTACCCAGGCTCCCAATGGTACCATG
TCCGGAGCTGCTGCCCCTCTCCGTAGCAGCTTGGTCACTGGCTCGACCTC
TCACGGTCCCTACTCTGGCACTCCCACCACCGTCGGAGCTGTCACCACTG
CTACCCTCGGCCTGACCGTTTCTGCCATGGGCCCTAACCCCACTGCCACC
TACTACAACACCAACGGCATGCTCACTCAGCCCGAGCCTGCCCCCTACAT
CCCTGCTGGTGGTCTTGGTACCAACGGGTCTCTTCCTCGCTACATGGTTG
AGTCCGACTTCGACTACGAGTCAATCACCCTTGGTCTTTACCAGGAGTGG
ATCGAGCTCGACACCTTCAACAACGGTCTCGCTACCTTCTCTGAGGAGGA
CTTCATTGCTGCCGGTCTCACTGCTGAGGACCGTGAGCTCATTCGCTTCA
TGGCCCAGCAAGAGGAGGGTCACGCTACTCTCTTGACCAACATGCTCGGT
CACACCGCACCTCCCCAGTGCACCTACAACTACCCTTACACCACTGTCCG
TGAGTTCCTCGACTTCAACCAGAAGCTCACCCGCTACGGTGAGTCTGGTG
TTTGGGGCTTCATCAACCACCTCGACAGCCGTGAGGTCGGTCAGCTCCTT
GCTCAGTCCATCGCCACCGAGGGCCGCCAGCAGATGGCTTTCCGCCAGAT
GAGCGGTCTCTTCCCCCTGCCCGTCTACTTCGAGACCGGTATTCCCCATT
CTTGGGCCTGGACTTTTCTTTGCTCCCTAAATTTCCCCCTTGCCCTGCCA
ACACCCACTCCTTCTCGCAAGGGCAAAACTTTCCCGCCCTCCCCCATTCG
TCCACCCACCCCCAACATTAACCCGTTTGGCCCGCCCAACCAAAACCTGC
TGCTTTTTTGAGGGTTCCTCGGGAATAAACCCCCCTTTTTCCCAACCCCC
CCCCACTTCCCCACCAATTTCCCCCCCAAAAAAAAGGAGAAAAAACGTCC
GCCCCCAAACACTTGGTAAAACCTCTCCCCTGGGGGGGGTTTTCCAAGGG
CGCCTTTTGGGTGGTGTTCCCCCCC
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