DY304425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3H_ARATH (Ataxin-3 homolog OS=Arabidopsis thaliana GN=At3g54130 PE=2 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 4.366e-97 Identity = 174/207 (84.06%), Postives = 187/207 (90.34%), Query Frame = 2 Query: 323 MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGR-VPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFPKECPI-SSSDSSNGYGQGLSPENAERITKS 937 ME SNGGMLYHEVQES LCAVHCVNTVLQGPFFSEFDLAA+A+DLD ERQVMLEG V + GDFL EESHNVSL GDFSIQVLQKALEVWDLQVIPLNCP AEPAQIDPELE+AFICHLHDHWFCIRKVNGEWYNFDSL AAP+HLSKFYLSA+LDSLKG GWSIFIVKGNFP+ECP+ SSS++SN +GQ LSPE+AERI K+ Sbjct: 1 MERTSNGGMLYHEVQESNLCAVHCVNTVLQGPFFSEFDLAAVAADLDGKERQVMLEGAAVGGFAPGDFLAEESHNVSLGGDFSIQVLQKALEVWDLQVIPLNCPDAEPAQIDPELESAFICHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKFYLSAFLDSLKGAGWSIFIVKGNFPQECPMSSSSEASNSFGQWLSPEDAERIRKN 207
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3_ORYSJ (Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica GN=Os01g0851400 PE=3 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 9.125e-87 Identity = 157/213 (73.71%), Postives = 178/213 (83.57%), Query Frame = 2 Query: 332 ASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASS--GDFLTEE--SHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFPKECPISSSDSSNGYGQGLSPENAERITKSCNKRKGP 958 ASNGG+LYHEVQE KLCAVHCVNT LQGPFFSEFDL+ALA DLD+ ERQVM EG AA++ GDFL E SHNVSL GDFSIQVLQKALEVWDLQVIPL+ P DPELE AFICHL DHWFCIRKVNGEWYNF+SLY APEHLSKFYLSA++D+LKG GWSIF V+GNFPKECP+ +++ SNG+GQ L+P++A RIT SCN+ + P Sbjct: 7 ASNGGLLYHEVQEGKLCAVHCVNTTLQGPFFSEFDLSALAVDLDQRERQVMSEGAAGAATTAAGDFLAEGEGSHNVSLGGDFSIQVLQKALEVWDLQVIPLDSPDVGSCLFDPELETAFICHLQDHWFCIRKVNGEWYNFNSLYPAPEHLSKFYLSAFIDTLKGSGWSIFAVRGNFPKECPM-ATEGSNGFGQWLTPDDARRITSSCNQVQTP 218
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3_HUMAN (Ataxin-3 OS=Homo sapiens GN=ATXN3 PE=1 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 5.077e-37 Identity = 74/167 (44.31%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 350 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFP 850 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+VKG+ P Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP 170
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3_RAT (Ataxin-3 OS=Rattus norvegicus GN=Atxn3 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 8.660e-37 Identity = 74/167 (44.31%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 350 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFP 850 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+VKG+ P Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP 170
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3_MOUSE (Ataxin-3 OS=Mus musculus GN=Atxn3 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 8.660e-37 Identity = 74/167 (44.31%), Postives = 107/167 (64.07%), Query Frame = 2 Query: 350 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFP 850 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+VKG+ P Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP 170
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3_CHICK (Ataxin-3 OS=Gallus gallus GN=ATXN3 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.929e-36 Identity = 74/167 (44.31%), Postives = 106/167 (63.47%), Query Frame = 2 Query: 350 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFP 850 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+VKG+ P Sbjct: 4 IFHERQEGSLCAQHCLNNLLQGEYFSPVELSSIAQQLDEEERMRMAEGGVSSEEYRTFLQQPSVNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLGIDPINEKSFICNYKEHWFTVRKLGKQWFNLNSLLMGPELISDTYLALFLAQLQQEGYSIFVVKGDLP 170
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3L_HUMAN (Putative ataxin-3-like protein OS=Homo sapiens GN=ATXN3L PE=5 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 6.862e-34 Identity = 73/167 (43.71%), Postives = 101/167 (60.48%), Query Frame = 2 Query: 350 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFP 850 ++HE QE LCA HC+N +LQG +FS +LA++A LD ER M EG V + FL + S N+ G FSIQV+ AL+ W L++I N P + IDP E +FIC+ HWF IRK W+N +SL A PE +S L+ +L L+ +S+F+VKG+ P Sbjct: 4 IFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLAFLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLP 170
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3_CAEEL (Ataxin-3 homolog OS=Caenorhabditis elegans GN=atx-3 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.446e-23 Identity = 57/168 (33.93%), Postives = 95/168 (56.55%), Query Frame = 2 Query: 350 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFPK 853 ++ E QE+ LCA H +N +LQ + DL LA +D+ E+Q++ + + S N++ G FSIQVL+KALE + L++ + P + +P A+IC+L +HWF +RK +W+ +S+ P+ LS Y+S +L + G+SIF+V+G P+ Sbjct: 10 IFFEHQEAALCAQHALNMLLQDALYKWQDLRDLAIQMDKMEQQIL--------GNANPTPGRSENMNESGYFSIQVLEKALETFSLKLTNIENPAMVDYKNNPLTARAYICNLREHWFVLRKFGNQWFELNSVNRGPKLLSDTYVSMFLHQVSSEGYSIFVVQGVLPR 169
BLAST of DY304425 vs. ExPASy Swiss-Prot
Match: ATX3_CAEBR (Ataxin-3 homolog OS=Caenorhabditis briggsae GN=atx-3 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.484e-20 Identity = 52/167 (31.14%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 350 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVKGNFP 850 ++ E Q++ LCA H +N +LQ F+ +L LA +D+ E ++ + S N++ G FSIQV++KALE +DL++I + P + +P A++ +L +HWF +RK +W+ +S+ P+ L+ Y+ YL +SIF+V+G P Sbjct: 11 IFFERQQAALCAQHALNMLLQDSLFTYENLRDLARQMDQMEHDIL--------GNNANAVGRSENMNDSGFFSIQVIEKALETFDLKLINMENPAMAEFKANPLTARAYVLNLREHWFVLRKFGNQWFELNSVKNGPKLLTDTYVKEYLHQFAAENYSIFVVQGILP 169 The following BLAST results are available for this feature:
BLAST of DY304425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304425 ID=DY304425; Name=DY304425; organism=Citrus clementina; type=EST; length=1154bpback to top |