DY304426

Overview
NameDY304426
Unique NameDY304426
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1258
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 3.318e-97
Identity = 155/179 (86.59%), Postives = 164/179 (91.62%), Query Frame = 1
Query:  322 AATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            AATGAGFI RDMTFEN+AGPAKHQAVALRVG DHAVVYRCN+IGYQD LYVHSNRQF+REC+IYGTVDFIFGNAAV+LQ C IYARKPMA QK TITAQNRKDPNQNTGISIH C L A PDL+ASKGS PTYLGRPWKLYSRVVYM++ MGDHI PRGWLEWNG FALD+LYYGEYMN
Sbjct:  356 AATGAGFIVRDMTFENYAGPAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMN 534          

HSP 2 Score: 44.2838 bits (103), Expect = 3.318e-97
Identity = 21/33 (63.64%), Postives = 23/33 (69.70%), Query Frame = 3
Query:  867 GFARGHRVRWPGLPVITSATEASKFPVSQFIYG 965
            G   G RV+WPG  VITS  EASKF V+QFI G
Sbjct:  538 GSGIGQRVKWPGYHVITSTVEASKFTVAQFISG 570          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 3.062e-92
Identity = 147/179 (82.12%), Postives = 162/179 (90.50%), Query Frame = 1
Query:  322 AATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            AATGAGFIARD+TFEN+AGPAKHQAVALR+GADHAV+YRCN+IGYQDTLYVHSNRQF+RECDIYGTVDFIFGNAAVVLQ C+IYARKPM  QKNTITAQNRKDPNQNTGISIH   + AA DLQA+ GS  TYLGRPWKL+SR VYM++Y+G H+  RGWLEWN  FALDTLYYGEY+N
Sbjct:  367 AATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLN 545          

HSP 2 Score: 44.2838 bits (103), Expect = 3.062e-92
Identity = 19/34 (55.88%), Postives = 23/34 (67.65%), Query Frame = 3
Query:  864 PGFARGHRVRWPGLPVITSATEASKFPVSQFIYG 965
            PG   G RV WPG  VI S  EA++F V++FIYG
Sbjct:  548 PGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYG 581          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 5.233e-71
Identity = 120/180 (66.67%), Postives = 143/180 (79.44%), Query Frame = 1
Query:  322 AATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQ-ASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            A +G GFIARD+TFEN AGP KHQAVALR  +D +V YRCN+ GYQDTLY H+ RQFYR+C I GTVDFIFG+A VV Q C I A+K + NQKN+ITAQ RKDPN+ TGISI  C++ A  DL+ AS  S PTYLGRPWKLYSR V M +++ + I+P GWLEWNGDFAL++L+YGEYMN
Sbjct:  290 AVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMN 469          

HSP 2 Score: 39.2762 bits (90), Expect = 5.233e-71
Identity = 17/36 (47.22%), Postives = 22/36 (61.11%), Query Frame = 3
Query:  864 PGFARGHRVRWPGLPVITSATEASKFPVSQFIYGVL 971
            PG   G RV+WPG  V   +T+A  + V+QFI G L
Sbjct:  472 PGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNL 507          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.392e-67
Identity = 121/179 (67.60%), Postives = 138/179 (77.09%), Query Frame = 1
Query:  322 AATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            A  G GFIAR ++FEN+AGP+KHQAVALR GAD +  Y+C+ +GYQDTLYVHS RQFY ECD+YGT+DFIFGNAA VLQKC +YARKP  NQKN  TAQ R DPNQNTGISI +C + AA DL     S  TYLGRPWK YSR V++L+ M   I P GWLEW+GDFAL TLYY EY N
Sbjct:   91 AVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTAQGRDDPNQNTGISILNCKVAAAADLIPVLSSFKTYLGRPWKEYSRTVFLLSQMESLIDPAGWLEWSGDFALTTLYYREYKN 269          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 6.908e-67
Identity = 124/187 (66.31%), Postives = 141/187 (75.40%), Query Frame = 1
Query:  298 TCNDNNFAAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            T N ++FA   G  F+A D+TF N AGP KHQAVALR  A+ +  YRC+  GYQDTLYVHS RQFYRECDIYGTVDFIFGNAA + Q C IYARKPMA QKN ITA  R DPNQNTGISI +C++ AAPDL A   S  T+LGRPWK YSR V+M +Y+ D +QP GWLEWNG   LDT+YYGEY N
Sbjct:  380 TYNCSSFAVV-GERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSN 565          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 9.652e-67
Identity = 114/179 (63.69%), Postives = 136/179 (75.98%), Query Frame = 1
Query:  322 AATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            AA G  F+ARD+TF+N AGP+KHQAVALRVG+D +  Y+C++  YQDTLYVHSNRQF+ +C I GTVDFIFGNAA VLQ C I AR+P + QKN +TAQ R DPNQNTGI I +C +    DL A KG+ PTYLGRPWK YSR V M + + D I+P GW EW+G FALDTL Y EY+N
Sbjct:  358 AAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTAQGRSDPNQNTGIVIQNCRIGGTSDLLAVKGTFPTYLGRPWKEYSRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLN 536          

HSP 2 Score: 35.4242 bits (80), Expect = 9.652e-67
Identity = 17/33 (51.52%), Postives = 19/33 (57.58%), Query Frame = 3
Query:  867 GFARGHRVRWPGLPVITSATEASKFPVSQFIYG 965
            G    +RV+W G  VITS TEA  F   QFI G
Sbjct:  540 GAGTANRVKWKGYKVITSDTEAQPFTAGQFIGG 572          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 9.659e-67
Identity = 114/179 (63.69%), Postives = 133/179 (74.30%), Query Frame = 1
Query:  322 AATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            A +G GFIARD+TF+N AGP KHQAVA+R   D  V YRC + GYQDTLY HS RQF+REC I GTVDFIFG+A  V Q C I A++ + NQKN+ITAQ RKDPN+ TG +I   ++ A  DL  +  +  TYLGRPWKLYSR V+M  YM D I P GWLEWNG+FALDTLYYGEYMN
Sbjct:  296 AVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMN 474          

HSP 2 Score: 38.1206 bits (87), Expect = 9.659e-67
Identity = 17/36 (47.22%), Postives = 23/36 (63.89%), Query Frame = 3
Query:  864 PGFARGHRVRWPGLPVITSATEASKFPVSQFIYGVL 971
            PG +   RV+WPG  V+ ++ EA+ F VSQ I G L
Sbjct:  477 PGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNL 512          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 9.699e-67
Identity = 116/179 (64.80%), Postives = 137/179 (76.54%), Query Frame = 1
Query:  322 AATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            AA GAGF+ARD+TF+N AG AKHQAVALRVG+D +  YRC+++ YQD+LYVHSNRQF+  C I GTVDFIFGNAAVVLQ C I+AR+P + QKN +TAQ R DPNQNTGI I    + A  DLQ  + S PTYLGRPWK YSR V M + + + I P GW  W+G+FALDTLYYGEY N
Sbjct:   90 AAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQN 268          

HSP 2 Score: 33.4982 bits (75), Expect = 9.699e-67
Identity = 17/33 (51.52%), Postives = 18/33 (54.55%), Query Frame = 3
Query:  867 GFARGHRVRWPGLPVITSATEASKFPVSQFIYG 965
            G A   RV W G  VITS+TEA  F    FI G
Sbjct:  272 GAATSGRVTWKGFKVITSSTEAQGFTPGSFIAG 304          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 1.641e-66
Identity = 115/180 (63.89%), Postives = 137/180 (76.11%), Query Frame = 1
Query:  319 AAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            AA  G GF+ARD+TF+N AGP+KHQAVALRVGAD +  Y C+++ YQDTLYVHSNRQF+  C I GTVDFIFGNAA VLQ C I+ARKP + QKN +TAQ R DPNQNTGI I    + A  DL+  +GS PTYLGRPWK YSR V M + + D I P GW EW+G+FAL+TL+YGE+ N
Sbjct:  354 AAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQN 533          

HSP 2 Score: 34.2686 bits (77), Expect = 1.641e-66
Identity = 17/33 (51.52%), Postives = 18/33 (54.55%), Query Frame = 3
Query:  867 GFARGHRVRWPGLPVITSATEASKFPVSQFIYG 965
            G     RV+W G  VITSATEA  F    FI G
Sbjct:  537 GAGTSGRVKWKGFRVITSATEAQAFTPGSFIAG 569          
BLAST of DY304426 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.643e-66
Identity = 114/179 (63.69%), Postives = 136/179 (75.98%), Query Frame = 1
Query:  322 AATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMANQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMN 858
            AA G GFIAR +TF N AG +  QAVALR G+D +V Y+C+   YQDTLYVHSNRQFYR+CD+YGTVDFIFGNAA VLQ C I+AR+P  ++ NTITAQ R DPNQNTGI IH+  + AA DL+   GS  TYLGRPW+ YSR V+M T +   I PRGWLEW+G+FAL TL+Y E+ N
Sbjct:  284 AAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFARRP-RSKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLRPVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWDGNFALKTLFYAEFQN 461          

HSP 2 Score: 39.2762 bits (90), Expect = 1.643e-66
Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  864 PGFARGHRVRWPGLPVITSATEASKFPVSQFIYG 965
            PG +   RV WPG  V+ SA+EASKF V  F+ G
Sbjct:  464 PGASTSGRVTWPGFRVLGSASEASKFTVGTFLAG 497          
The following BLAST results are available for this feature:
BLAST of DY304426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
PME61_ARATH3.318e-9786.59Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME34_ARATH3.062e-9282.12Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_PRUPE5.233e-7166.67Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME_ACTDE1.392e-6767.60Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME25_ARATH6.908e-6766.31Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME2_ARATH9.652e-6763.69Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME32_ARATH9.659e-6763.69Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_DAUCA9.699e-6764.80Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME1_CITSI1.641e-6663.89Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME17_ARATH1.643e-6663.69Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAQ8YK17RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304426 ID=DY304426; Name=DY304426; organism=Citrus clementina; type=EST; length=1258bp
CAAATTCATAACGTCGCCACCGAGTCATTTTCCGTGCACCCTTTTTATCG
TCTATCATGCTCACTGGGAAAGTTTATTGAGTCATTTCCTACTAAAGTAT
TGGATAATATTGTCTTAAACTCATCGATGGCTACAAATTAAAGAAAGAGA
ACAGCGTCACATTATTGGACGGTGGGTCACGCTTATCACTTGAATCCTTT
GCCGTATTATTAACTATAATTAAAATAAAAAATAAAAAATAGCTATCAAT
TTTAATTTGTGCATCGTGCATAATCAACCAAATTATCATGACATGACACG
TGTAACGATAATAATTTCGCAGCGGCGACTGGAGCTGGCTTTATCGCTCG
GGACATGACGTTTGAGAACTTTGCGGGACCGGCGAAGCACCAAGCGGTGG
CCCTCCGCGTCGGCGCCGACCACGCGGTGGTGTACCGCTGCAACGTAATC
GGTTACCAAGACACCCTCTACGTGCACTCAAACCGGCAGTTCTACCGCGA
GTGCGACATCTACGGCACCGTGGACTTCATCTTCGGGAACGCCGCCGTGG
TCTTACAGAAATGCGCCATCTACGCTCGCAAGCCGATGGCCAATCAGAAG
AACACCATCACGGCGCAGAACAGGAAAGACCCTAATCAGAACACGGGCAT
CTCAATCCACGACTGCAGCCTCTACGCCGCCCCCGATCTTCAGGCGTCCA
AAGGCAGCATCCCCACGTACTTAGGCAGGCCGTGGAAGCTCTACTCGAGG
GTTGTGTACATGCTAACGTACATGGGTGACCACATCCAACCCAGAGGCTG
GCTTGAATGGAATGGAGACTTTGCACTGGATACTTTATACTACGGCGAGT
ACATGAACTCCGGCCCGGGTTCGCCCGTGGTCACCGGGTGAGGTGGCCGG
GGTTACCGGTTATAACGTCGGCCACGGAGGCAAGTAAATTCCCTGTGTCG
CAATTTATCTACGGGGTCCTCCGGGCTGCCGCCAACTGGGGGGGGCTTTT
TTGGGGTGGGCTTTTGGTTTTAAAGTGGAATTTTTAATTTAACTTTTAAA
ACCAAAACCCTAAATTAAATAAAAGGGGGGGCCCCAAGGGGGTTTTGAAG
GGAACAAAAGGGAATTTTTATTTTTTGCGCCAAAAACCACCCCCCCCCCG
GGGGGAGGGGTTAAAAATTTTTAAAAATATTTTTTTTTTTCCCCAAATTT
TTAAAAAAAATTTTTTTTCGTGGGGTTTTCCCTTTTTTTTTTTTTTCTCC
CCCCTCTT
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