DY304427

Overview
NameDY304427
Unique NameDY304427
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1261
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAPS2_MOUSE (Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Mus musculus GN=Saps2 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 7.735e-34
Identity = 75/220 (34.09%), Postives = 132/220 (60.00%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L+T S V+ +LDKE+ T         I+QECKA N +L++FL  +  +E+L+  I  + P+D E++  FK+P  ACE+ TC+V  I   L EDE L+NLL+ FL+ +   + LLA +FSK +  L+ RKT  ++ ++K  ++ +++L+  IG +++M++L+RL+   E +     E + W+ +  +++ +V         +  +NA++ LC I
Sbjct:    1 MFWKF-DLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVNLITQDPPQDMEEKVRFKYPNTACELLTCDVPQISDRLGEDESLLNLLYDFLDQEPPLNPLLASFFSKTIGNLIARKTEQVIMFLKKKEKFISQLLKHIGTSALMDLLLRLVSCVEPVGLR-QEVLHWLNEEKIIQRLVALIHPHQDEDRQSNASQALCDI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAPS1_MOUSE (Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Mus musculus GN=Saps1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.488e-32
Identity = 71/220 (32.27%), Postives = 131/220 (59.55%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L T+S ++T+L+KE+ +         ++QECK +N +L++FL + + ++ ++ ++  E P   E+R  +K+P VACEI T +V  I   L  DE L+N L+ FL+  DS + LLA +FSKV+  L+ RKT  L+ +++   + +  L+  IG ++IM++L+RL+   E       +   W+ +  +++ ++++   S     H+NA+++LC I
Sbjct:    1 MFWKF-DLHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLLDFLLQPSHLQAMVAWVTQEPPASGEERLRYKYPSVACEILTSDVPQINDALGADESLLNRLYGFLQSGDSLNPLLASFFSKVMGILINRKTDQLVSFLRKKDDFVDLLLRHIGTSAIMDLLLRLLTCVERPQLR-QDVFNWLNEEKIVQRLIEQIHPSKDDNQHSNASQSLCDI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAPS2_HUMAN (Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Homo sapiens GN=SAPS2 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 5.543e-32
Identity = 74/220 (33.64%), Postives = 130/220 (59.09%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L+T S V+ +LDKE+ T         I+QECKA N +L++FL  +  +E+L+  I  + P D E++  FK+P  ACE+ TC+V  I   L  DE L++LL+ FL+ +   + LLA +FSK +  L+ RKT  ++ ++K   + ++ ++  IG +++M++L+RL+   E       + + W+ +  V++ +V+    S   +  +NA++TLC I
Sbjct:    1 MFWKF-DLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLLDFLCRQQCMEELVSLITQDPPLDMEEKVRFKYPNTACELLTCDVPQISDRLGGDESLLSLLYDFLDHEPPLNPLLASFFSKTIGNLIARKTEQVITFLKKKDKFISLVLKHIGTSALMDLLLRLVSCVEPAGLR-QDVLHWLNEEKVIQRLVELIHPSQDEDRQSNASQTLCDI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAPS1_HUMAN (Serine/threonine-protein phosphatase 6 regulatory subunit 1 OS=Homo sapiens GN=SAPS1 PE=1 SV=5)

HSP 1 Score: 138.272 bits (347), Expect = 9.455e-32
Identity = 69/220 (31.36%), Postives = 131/220 (59.55%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L T+S ++T+L++E+ +         ++QECK +N +L++FL +   ++ ++ ++  E P+  E+R  +K+P VACEI T +V  I   L  DE L+N L+ FL+   S + LLA +FSKV+  L+ RKT  L+ +++   + +  L+  IG ++IM++L+RL+   E       + + W+ +  +++ ++++   S     H+NA+++LC I
Sbjct:    1 MFWKF-DLHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVNRKLLDFLLQPPHLQAMVAWVTQEPPDSGEERLRYKYPSVACEILTSDVPQINDALGADESLLNRLYGFLQSTGSLNPLLASFFSKVMGILINRKTDQLVSFLRKKDDFVDLLLQHIGTSAIMDLLLRLLTCVERPQLR-QDVVNWLNEEKIVQRLIEQIHPSKDENQHSNASQSLCDI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAPS3_MOUSE (Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Mus musculus GN=Saps3 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.045e-30
Identity = 68/220 (30.91%), Postives = 132/220 (60.00%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L ++S ++T+L++E+ T         ++QECKA N +LI FL +   +E L+ +I+ E P+D +++  +K+P ++CE+ T +V  +   L EDE L+  L+SFL  +   + LLA +FSKV+  L+ RK   ++ ++K  ++ +  ++  IG ++IM++L+RL+   E       + + W+ +  +++ +V+    S   + H+NA+++LC I
Sbjct:    1 MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVSFIIEEPPQDMDEKIRYKYPNISCELLTSDVSQMNDRLGEDESLLMKLYSFLLNESPLNPLLASFFSKVLSILISRKPEQIVDFLKKKRDFVDLIIKHIGTSAIMDLLLRLLTCIEPPQPR-QDVLNWLNEERIIQRLVEIVHPSQEEDRHSNASQSLCEI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAPS3_CHICK (Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Gallus gallus GN=SAPS3 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.045e-30
Identity = 69/220 (31.36%), Postives = 131/220 (59.55%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L ++S ++T+L++E+ T         ++QECKA N +LI FL +   +E L+ +I+ E P+D +++  +K+P ++CE+ T +V  I   L E+E L+  L+SFL  +   + LLA +FSKV+  L+ RK   ++ ++K   + +  ++  IG ++IM++L+RL+   E       E + W+ +  +++ +V+    S   + H+NA+++LC I
Sbjct:    1 MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKSECLEDLVSFIIEEPPQDMDEKIRYKYPNISCELLTSDVSQINDRLGEEESLLMKLYSFLLNESPLNPLLASFFSKVLSILISRKPEQIVDFLKKKHDFVDLVIKHIGTSAIMDLLLRLLTCIEPPQPR-QEVLNWLNEERIIQRLVEIVHPSQDEDRHSNASQSLCEI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAPS3_HUMAN (Serine/threonine-protein phosphatase 6 regulatory subunit 3 OS=Homo sapiens GN=SAPS3 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 2.329e-30
Identity = 68/220 (30.91%), Postives = 130/220 (59.09%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L ++S ++T+L++E+ T         ++QECKA N +LI FL +   +E L+ +I+ E P+D +++  +K+P ++CE+ T +V  +   L EDE L+  L+SFL      + LLA +FSKV+  L+ RK   ++ ++K   + +  ++  IG ++IM++L+RL+   E       + + W+ +  +++ +V+    S   + H+NA+++LC I
Sbjct:    1 MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLIEFLLKAECLEDLVSFIIEEPPQDMDEKIRYKYPNISCELLTSDVSQMNDRLGEDESLLMKLYSFLLNDSPLNPLLASFFSKVLSILISRKPEQIVDFLKKKHDFVDLIIKHIGTSAIMDLLLRLLTCIEPPQPR-QDVLNWLNEEKIIQRLVEIVHPSQEEDRHSNASQSLCEI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAP3B_XENLA (Serine/threonine-protein phosphatase 6 regulatory subunit 3-B OS=Xenopus laevis GN=saps3-B PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.510e-29
Identity = 68/220 (30.91%), Postives = 128/220 (58.18%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L ++S ++T+L+++  T         I+QECKA N +L+ FL +   +E L+ +I  E P+D +++  +K+P ++CE+ T +V  I   L EDE L+  L++FL      + LLA +FSKV+  L+ RK   ++ ++K   + +  ++  IG ++IM++L+RL+   E       + + W+ +  +++ +VD    S   + H+NA+++LC I
Sbjct:    1 MFWKF-DLHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKSECLEDLVTFITEEPPQDMDEKIRYKYPNLSCELLTSDVSQINDRLGEDETLLKRLYAFLLNDPPLNPLLASFFSKVLSILISRKPEQIVAFLKKKDDFVNLIIKHIGTSAIMDLLLRLLTCIEPPQLR-QDVLNWLNEEKIIQRLVDIVHPSQDEDRHSNASQSLCEI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: SAP3A_XENLA (Serine/threonine-protein phosphatase 6 regulatory subunit 3-A OS=Xenopus laevis GN=saps3-A PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.363e-29
Identity = 67/220 (30.45%), Postives = 128/220 (58.18%), Query Frame = 1
Query:  124 MFWRMAGLSTASPVETILDKENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYIVVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSI 783
            MFW+   L ++S ++T+L+++  T         I+QECKA N +L+ FL +   +E L+ +I  E P+D +++  +K+P ++CE+ T +V  I   L EDE L+  L++FL      + LLA +FSKV+  L+ RK   ++ ++K   + +  ++  IG ++IM++L+RL+   E       + + W+ +  +++ +V+    S   + H+NA+++LC I
Sbjct:    1 MFWKF-DLHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLVEFLLKAECLEDLVTFITEEPPQDMDEKIRYKYPNLSCELLTSDVSQINDRLGEDESLLKRLYAFLLNDPPLNPLLASFFSKVLSILISRKPEQIVAFLKQKDDFVNLIIKHIGTSAIMDLLLRLLTCIEPPQLR-QDVLNWLNEEKIIQRLVEIVHPSQDEDRHSNASQSLCEI 218          
BLAST of DY304427 vs. ExPASy Swiss-Prot
Match: EKC1_SCHPO (Extragenic suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=ekc1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 3.991e-14
Identity = 59/235 (25.11%), Postives = 112/235 (47.66%), Query Frame = 1
Query:  124 MFWRMA---GLSTASPVETILDK--ENFTXXXXXXXXXIIQECKALNGRLINFLRERAQVEQLIQYI-------VVEAPEDAEKRRTFKFPFVACEIFTCEVDIILKTLVEDEELMNLLFSFLEPKDSHSTLLAGYFSKVVICLLLRKTVPLMHYIKAHQEIMARLVDLIGITSIMEVLIRLIGADEHMYTNFTESMQWIEDTNVLEMIVDKFSSSDSPEVHANAAETLCSINTI 792
            MFWR+    G  ++S +E ILDK  +            ++ ECK+ N +L+ +L +   + QLI YI       +  A    E+    +  ++A EI + +V  I +  VE++ LM  L+SFL+ +   + L A YF+KV    L +KT   + +I++    + +++     ++IM++L++ I  D            W+    +++ ++   S    P+V    A+ + +I  I
Sbjct:    1 MFWRLGQGFGFQSSSAIEAILDKPEDEINLKELLEENGVLDECKSHNPKLLEYLCKPEVLSQLIDYILEVDETEIPSADGGYEEPEHTRLSYIASEILSSDVWSICEACVENKTLMVKLWSFLDSEGPLNPLQASYFAKVNEHFLDKKTEETVAFIQSIDNFVEKILRHAETSAIMDLLLKFISMDR--CNTAIGIADWLYSQGLIQSLLRLLSPYVDPDVQFTVADVIKAIIAI 233          
The following BLAST results are available for this feature:
BLAST of DY304427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
SAPS2_MOUSE7.735e-3434.09Serine/threonine-protein phosphatase 6 regulatory ... [more]
SAPS1_MOUSE2.488e-3232.27Serine/threonine-protein phosphatase 6 regulatory ... [more]
SAPS2_HUMAN5.543e-3233.64Serine/threonine-protein phosphatase 6 regulatory ... [more]
SAPS1_HUMAN9.455e-3231.36Serine/threonine-protein phosphatase 6 regulatory ... [more]
SAPS3_MOUSE1.045e-3030.91Serine/threonine-protein phosphatase 6 regulatory ... [more]
SAPS3_CHICK1.045e-3031.36Serine/threonine-protein phosphatase 6 regulatory ... [more]
SAPS3_HUMAN2.329e-3030.91Serine/threonine-protein phosphatase 6 regulatory ... [more]
SAP3B_XENLA1.510e-2930.91Serine/threonine-protein phosphatase 6 regulatory ... [more]
SAP3A_XENLA3.363e-2930.45Serine/threonine-protein phosphatase 6 regulatory ... [more]
EKC1_SCHPO3.991e-1425.11Extragenic suppressor of kinetochore protein 1 OS=... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAQ8YK18RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304427 ID=DY304427; Name=DY304427; organism=Citrus clementina; type=EST; length=1261bp
TTTTCTTGCGGCGTGATTGGATCGTTTTCTCTTGTCTTGTTTTGGCTATT
GGCGAATCGTCGATTAGGGTTTCGAGGTTCTCAGATCTGAATACGGTGAC
GGTTTCGTTGTTGATTTGCGAAGATGTTTTGGCGTATGGCGGGATTGTCC
ACTGCGTCTCCAGTGGAGACAATTTTGGATAAGGAAAATTTTACGTTGGA
GGAGCTTCTTGACGAGGATGATATAATTCAAGAATGCAAAGCTTTGAACG
GTCGTCTTATCAATTTTTTACGAGAAAGGGCTCAGGTTGAACAACTTATT
CAATATATTGTGGTTGAAGCTCCTGAGGATGCGGAGAAGAGGAGAACTTT
CAAGTTTCCTTTTGTTGCATGTGAGATTTTTACTTGTGAAGTTGATATTA
TCCTTAAGACGCTGGTAGAGGATGAAGAGTTGATGAATTTGTTATTTTCC
TTTTTGGAACCGAAAGACTCCCATAGCACGTTGTTGGCTGGGTACTTCAG
CAAGGTTGTTATTTGCCTATTATTGCGGAAGACGGTTCCTTTAATGCATT
ATATTAAAGCTCATCAAGAAATTATGGCACGATTAGTTGACTTGATTGGT
ATTACGTCCATCATGGAGGTTTTAATACGTCTTATTGGTGCTGATGAGCA
CATGTACACAAACTTTACTGAATCAATGCAATGGATAGAGGATACAAATG
TGCTGGAGATGATTGTGGACAAGTTCAGCTCTTCAGATTCTCCCGAGGTG
CATGCAAATGCAGCTGAAACACTGTGTTCTATAAACACGATCTGCCCCCC
CGGCTCTTGCTGCCAAAATTTCCAGCCCAAATTTTATAGGGAAGTTATTT
TCCCTCTGCCCTTGGAAATTCCCGCCCAAAATCTGTTCCGGTTAACTCCT
TGTCAATCTGCATTATCTTTGTAAACCCTAAAAAGCTAATTTCTGGGAAA
ATATTACTTGTTTACCCCCCCGCCGAACCCTTGGTTCCCCCGTTTCCTGT
AAATCCCAAACAAATTTGAGGGGATGCCAAGGGAACCTAGGGGGATTTTG
CCAAAATCCTCGGAATGGTTTCCCTTGAGGGAGAGTTTCTTTTTGTATCC
TCCCATAGGGGCCGTGTTACCCCCCCCCCCCCGCGAAAAAAAACCCCCAC
AGAGGAAGAATTTTGTCGATGGTTTTTTTTTATCGATTGGTTTTTTTTTC
GAATCTGGTGGTTTATCAGAGGAAACCGCTACCCTGCGACAAAAAAGAGA
AACACAACTAA
back to top