DY304428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EIF3F_ARATH (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 1.600e-109 Identity = 194/290 (66.90%), Postives = 225/290 (77.59%), Query Frame = 1 Query: 46 AASDRTVLQF----GPSSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPSDXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKLNTAGSM 903 A S+ T+LQF +SA TS +TA++HPLVIFN+CDC+VRRPD AERVIGTLLGS+LPDGTVDIRNSY VPHNE SDQVA+DI+YHH ML SHLKVN +E IVGW+STG GV GGS+LIH+FY REVPNP+HLTVDTGF NGEGT+KA+VS NLSLGDRQL A FQEIP+DLRM++AERVGFD+LK+TSVDKLP+D IND+YKYVD V G+ PDN++GR +++ VASLPKL P FD LVN ITRTQLSLAEKLNTA M Sbjct: 3 ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQM 292
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes GN=EIF3F PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.274e-47 Identity = 97/263 (36.88%), Postives = 152/263 (57.79%), Query Frame = 1 Query: 112 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 885 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SD ++ + +Y +D + G+ DN+VGR L V +PK+ P F+ ++N +T++Q++L EKL Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 358
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis GN=EIF3F PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.274e-47 Identity = 97/263 (36.88%), Postives = 152/263 (57.79%), Query Frame = 1 Query: 112 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 885 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SD ++ + +Y +D + G+ DN+VGR L V +PK+ P F+ ++N +T++Q++L EKL Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 358
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.274e-47 Identity = 97/263 (36.88%), Postives = 152/263 (57.79%), Query Frame = 1 Query: 112 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 885 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F + + + ER+G D++ T V L SD ++ + +Y +D + G+ DN+VGR L V +PK+ P F+ ++N +T++Q++L EKL Sbjct: 93 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 354
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EIF3F_MOUSE (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus GN=Eif3f PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.970e-47 Identity = 97/263 (36.88%), Postives = 153/263 (58.17%), Query Frame = 1 Query: 112 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST-----SVDKLPSDXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 885 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDTG ++G ++KAYVS + + R + F + + + ER+G D++ T V L SD ++ + +Y +D + G+ DN+VGR L V +PK+ P F+ ++N +T++Q++L EKL Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRESPNPIHLTVDTGLQHGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKL 358
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EI3F1_DROAN (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila ananassae GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 3.073e-44 Identity = 102/272 (37.50%), Postives = 145/272 (53.31%), Query Frame = 1 Query: 100 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 885 N+T +VHP+V+F + D Y RR + RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVNP E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G ++AYV + L + + F IP++L E E G +L+ T V P+ D ++ I KYVDD + + PDN+VGR L + + S+P ++ F ++ N + +TQL L EKL Sbjct: 5 NLTVRVHPVVLFQVVDAYERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNPNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKT-VGVSPAHRPKTVPPMLDLAQISEASQKLQQLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKL 274
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPS (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.525e-43 Identity = 100/272 (36.76%), Postives = 145/272 (53.31%), Query Frame = 1 Query: 100 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 885 N+T +VHP+V+F + D + RR ++ RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G +++YV + L + + F IP++L E E G +L+ T V P+ D ++ I KYVDD + + PDN+VGR L + + S+P +S F ++ N + +TQL L EKL Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNAESHRVIGTLLGSV-EKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VGVAPANRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHEQFTQMFNANVRNLLMVITLSQLIKTQLQLNEKL 274
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila persimilis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.525e-43 Identity = 100/272 (36.76%), Postives = 145/272 (53.31%), Query Frame = 1 Query: 100 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDKLPS----------DXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 885 N+T +VHP+V+F + D + RR ++ RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G +++YV + L + + F IP++L E E G +L+ T V P+ D ++ I KYVDD + + PDN+VGR L + + S+P +S F ++ N + +TQL L EKL Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNAESHRVIGTLLGSV-EKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKT-VGVAPANRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHEQFTQMFNANVRNLLMVITLSQLIKTQLQLNEKL 274
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EIF3F_DICDI (Eukaryotic translation initiation factor 3 subunit F OS=Dictyostelium discoideum GN=eif3f PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 4.438e-43 Identity = 101/271 (37.27%), Postives = 154/271 (56.83%), Query Frame = 1 Query: 97 SNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLG-DRQLAAQFQEIPLDLRMIEAERVGFDILKSTSVDK----LPSDXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKLN 888 S VT KVHP+VIFNI D Y+RR +RVIGTLLG DG ++IRN + V H+E ++Q+A+++EY ML HLK +P+E I+GW++TG + S I+ FY E+ N P+HLTVDTG N + AY++ NLSL + L + F ++PL++ EAE G + + T D+ L S+ + I Y++ +G D +GR L++T+ +LPK + DK++N +TR+QL++A K++ Sbjct: 11 SQVTVKVHPVVIFNILDHYIRRNVGQDRVIGTLLG-FNNDGVLEIRNCFPVVHSE-TEQIAVEMEYQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTNDTMGIHAYMAHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQTKYDQQSTSLLSELESLQGSLTKLDEMLESITSYIESVEKGEIQGDPRLGRFLAKTIQALPKANAQVMDKVINNSVKDLLMIVYLSSLTRSQLAVATKIS 279
BLAST of DY304428 vs. ExPASy Swiss-Prot
Match: EI3F1_DROGR (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila grimshawi GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 5.796e-43 Identity = 100/271 (36.90%), Postives = 144/271 (53.14%), Query Frame = 1 Query: 100 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQEIPLDLRMIEAERVGFDILKST---SVDKLPS------DXXXXXXXXXXXXXXINDIYKYVDDTVEGRAVPDNSVGRILSETVASLPKLSPPAFDKLVNXXXXXXXXXXXXXXITRTQLSLAEKL 885 N+T +VHP+V+F + D + RR + RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G ++AYV + L + + F IP++L E E G +L+ T S + P D ++ I KYVDD + + PDN+VGR L + + S+P ++ F ++ N + +TQL L EKL Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAQRPKTVPPMLDLAQISEASQKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLNEKL 274 The following BLAST results are available for this feature:
BLAST of DY304428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304428 ID=DY304428; Name=DY304428; organism=Citrus clementina; type=EST; length=1096bpback to top |