DY304437

Overview
NameDY304437
Unique NameDY304437
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1148
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304437 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.602e-75
Identity = 140/178 (78.65%), Postives = 149/178 (83.71%), Query Frame = 2
Query:  176 PSRAHSRSILTVRAGATDXXXXXXXXXXN----EPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTYQPNKRKESKYVSKRYERRRDGPPAERR 697
            P ++ S +  TVRA  TD          N    E RETIMLPGCDYNHWLIVMEFPKDPAPTREQMI+TYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTV+EETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPC YPTYQP + + SKY SK Y R+RDGPPAE+R
Sbjct:   42 PIKSRSAAYPTVRA-LTDGEYSSRRNNNNNNSGEERETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPKQSRSSKYKSKAYVRQRDGPPAEQR 218          
BLAST of DY304437 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.163e-31
Identity = 82/234 (35.04%), Postives = 128/234 (54.70%), Query Frame = 2
Query:   65 RTMATLYAPSILASKPLLSSRPQLTLGLRVGSPTLRLPSRAHSRSILTVR-----AGATDXXXXXXXXXXNEPRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIETYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCTYPTY---------------QPNKRKESKYVSKRYERRRD----GPPAER 694
            ++++ L+  S  +S PL  S P  +L L    P +   S      +++V+     A ++             P+ETI+L GCD+ HWL+V+E P    PTR+++I++Y+ TLA ++GS +EA+  +Y+ ST  Y  F   VSE+ S K K L  V WVLPDSY+DV+NKDYGG+ +++G+ +P   P Y               + N R  +   S+ +ERRR+    GPP +R
Sbjct:   16 KSLSFLFTRSFASSAPLAKS-PASSL-LSRSRPLVAAFSSVFRGGLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYD-PKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAGGPPPQR 245          
The following BLAST results are available for this feature:
BLAST of DY304437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DAG_ANTMA1.602e-7578.65DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
UMP1_ARATH3.163e-3135.04Uncharacterized protein At3g15000, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ8YL05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304437 ID=DY304437; Name=DY304437; organism=Citrus clementina; type=EST; length=1148bp
AACATTTTCGGATTTTCTCCTCTCGTTATCTTGGCAGCTTGGCTTTGGCA
CCAGCAGCAGCAAGAGAACAATGGCGACTCTGTACGCACCATCAATCCTC
GCATCCAAACCCCTCCTCTCATCTCGCCCTCAACTCACTCTGGGCCTCCG
AGTCGGCTCACCGACTCTCCGCCTCCCATCTCGCGCTCACTCGCGCTCGA
TCTTGACCGTCAGAGCTGGGGCAACGGACAGCGAGTACTCGTCCAAGAGA
AGCAGCAGCAATGAGCCGAGGGAGACGATTATGTTACCGGGATGTGACTA
CAACCACTGGCTTATTGTCATGGAGTTCCCCAAGGACCCTGCTCCCACGA
GAGAGCAGATGATTGAAACTTATCTCAATACTCTTGCCACTGTTCTTGGA
AGCATGGAAGAAGCAAAGAAGAATATGTATGCTTTTAGCACCACTACTTA
CACTGGATTCCAATGCACAGTATCCGAAGAAACCTCAGAGAAATTCAAAG
GCCTGCCTGGTGTTCTTTGGGTGTTGCCCGATTCATACATAGATGTCAAA
AATAAAGATTATGGAGGTGATAAATATGTCAATGGAGAGATCATTCCCTG
CACATATCCCACTTATCAGCCAAACAAACGAAAAGAATCAAAATATGTGA
GCAAAAGATATGAGAGACGAAGAGATGGCCCTCCTGCTGAAAGAAGAACG
AGACAAGCAGCTGGTCAGTCAGAATCAGCGTCGTCATAAGGTACAGAAAT
GCTGATTTATAGATTAATTACTTAATTATGGTTTGATGTTTTTATTTTCA
GTAATGTTTGTTTTATTATTTTCAACAGTTTGCGACTCCCAAAGCCAATC
ATACTACTGCCACCATGCGTATCAACAGTCTAATCAAGACACCTGTTTTA
TGAGTTCTCAAGCTGTTCTTGGTAGTTTTTGTAATGGATATTATTTAATG
TAGTTAGGAAAGAAATTCTCTGGGTATCCCCATCCTTTAATTTTGGGCCT
CTGGGGCTGTTAATTGAAATGGTTGTCCATTGACATTTTCGGGGTGGCCG
AAGGTTTGGCTGTCTTTTGGCCCAAAAGTAACGGTTGGGGTCCAAATTTT
CCATTTTAACTTTAAAAAATTAAAAAGTTTAATTTTTGTGCGCTAAAT
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