DY304454

Overview
NameDY304454
Unique NameDY304454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1289
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304454 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 7.735e-21
Identity = 55/110 (50.00%), Postives = 67/110 (60.91%), Query Frame = 3 
Query:   39 MLD*LWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXXXXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDW 368
            +LD LWDD+VAGPQP+RGLG LRK+   PL +K+ GE+           S                    RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYDW
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKVPQ-PLNLKDEGES-----------SKITMPTTPTTPVTPTTPISARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDW 99
The following BLAST results are available for this feature:
BLAST of DY304454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN7.735e-2150.00Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ8YM01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304454 ID=DY304454; Name=DY304454; organism=Citrus clementina; type=EST; length=1289bp
AAGATCTAGAAACTAGCAGCTAAATTGTAAATTTAAAGATGCTAGACTAG
CTTTGGGACGATGTTGTGGCAGGGCCTCAGCCTGATCGTGGCCTTGGCAG
GCTGAGGAAAATCACCACAACACCCTTAGCAGTCAAAGAGGGTGGTGAGG
CGGAGTCGTCGTCGGGCAAGTTCCAGAGGTCTCTGTCAATGCCAGCGAGT
CCAGGGGCACCGTCGACGCCAGTGACGCCGACGACGCCGCTGTCGGCGCG
TAAGGACAACGTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTA
CTAGGGGTATCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTCT
CCCACTGTTTATGACTGGTAAGTACGTGCGTGTGTCCTCACTCACTCGCT
CGCTCGCTCACTCGCTCTTCACTAGCATAGATGCTGCATGCTTGTTCTAA
CTTATTATTCTTTCTTTAGACCCTTATCAGTTGAACGCAAAGGCAACTTG
TACTCTATCTATATATGTTTAATCATGTTCGGTTGCTGATAAATATATAT
ATTTATTTATTAATTTGTTCTCTTTTTCTCCCCCCCCCCCCCCTTTTTTT
AAAACTGAATTAATTCCCCGATCAAAAAAAAAACCGCAGCTTATTATATT
CATGTGTGCGTGTGTGTGTGTTTTAAAAAGAAAAATGATGAAACCAAATC
GATGGAGCATCCACTCAAACATCTCTGTTTTTGTTTTGTTTTTTTTGTCG
TTCTTACCGGCTTCTCTCAGCCACCCAATAAAGGGCAAAAGGAAGGAAGA
AAAACTGGCCCTCTGTCTCAGGGGCGCGTTGAAATAAATCTTTGTCTTAT
CCAGTAATGATCCCTCCATTCAACCCCTTTGGTGAATCCCCGCCCCTTTC
TCCCTAATTTAAGCCCAAAGAATGTAATAAATAAAAAATTTTGTATTTGG
TAGTGATCATGGATAAAATTTAAATCCGACTTAACCTAAGGGTTGTTGGG
AATTGGTTTATTTTGGCGGGGGGAAAAATTAAAGAAATAAATTTAACCAA
TTATGGGAATAACCCCTTAAATTATATTTAATTAATTAATTATATATATA
ATTATAAAATATATTAATAAATAAAAAAGGGGTCCCTCAAACCCCCCGGA
ACCCCGGGGCCCCTCCCTGGTGTTTTTTTGGAAAAACCCGGGAGAATTTT
AATTTTTTTTGCCTCCCTCCAAAATTTTTTTGTTTTTTTTTTGTGTGATT
TTTTTTTTTGTTTGCCCCGCCCCTCTTTTTTTCTCAACG
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