DY304455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304455 vs. ExPASy Swiss-Prot
Match: VPS53_MOUSE (Vacuolar protein sorting-associated protein 53 homolog OS=Mus musculus GN=Vps53 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 4.060e-46 Identity = 107/316 (33.86%), Postives = 186/316 (58.86%), Query Frame = 2 Query: 11 CTALTKSQTLLNLFKVFQRILKAYATKLFA-RLPR-----GGTGIVAAATGMDGQ--IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQT--SNAASYTKFVSREMSKAEALLKVILSPVDSV---ADTYRALLPEGTPMEFQRILELRGLKKADHQTILDDFNKHVPGTTPP 913 C+ L+ + ++ L +FQ+ L+ YA K+ + LP+ GG I + +G R + + +IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+ D + M+++PW ++E VGDQS YV + + + ++P++ L+ YF F K A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q ASYTK V + M++AE +LKV+++P + + D Y LL + FQ+IL+++GLK+++ ++L+ + +P PP Sbjct: 485 CSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSSSGGLTISSLLKEKEGSEVARFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISSSIQLLVQDLDAACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKRSEQSSMLELLRQRLP--APP 798
BLAST of DY304455 vs. ExPASy Swiss-Prot
Match: VPS53_CHICK (Vacuolar protein sorting-associated protein 53 homolog OS=Gallus gallus GN=VPS53 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.437e-45 Identity = 105/316 (33.23%), Postives = 187/316 (59.18%), Query Frame = 2 Query: 11 CTALTKSQTLLNLFKVFQRILKAYATKLFA-RLPR-----GGTGIVAAATGMDGQ--IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQT--SNAASYTKFVSREMSKAEALLKVILSPVDS---VADTYRALLPEGTPMEFQRILELRGLKKADHQTILDDFNKHVPGTTPP 913 C+ L+ + ++ L +FQ+ L+ YA K+ + LP+ GG I + +G + + + +IC I+++AEYC T+ L E + + +D+ L + ++++ D FS VI+ ++ LV L+ D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K A+S P+F ++FKCK IS GA+Q+LLDT ++K +LLD+PS+G Q ASYT+ V + M++AE +LKV+++P + D Y LL + + FQ+IL+++GLK+++ ++L+ F + +P PP Sbjct: 484 CSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLVERINLTGETDTFSIVISNSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKAPASYTRIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRSEQSSMLELFRQRLP--APP 797
BLAST of DY304455 vs. ExPASy Swiss-Prot
Match: YNP8_CAEEL (Uncharacterized protein T05G5.8 OS=Caenorhabditis elegans GN=T05G5.8 PE=2 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 1.037e-33 Identity = 89/285 (31.23%), Postives = 159/285 (55.79%), Query Frame = 2 Query: 71 LKAYATK-LFARLPRGGTGIVAAATGMD------GQIRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGR--QTSNAASYTKFVSREMSKAEALLKVI---LSPVDSVADTYRALLPEGTPMEFQRILELRGLKKADHQTILDDF 883 L+ YAT L A LP G+ AA R++ + ++C I+ +A++C +TS L E +S+ I GVD+S+ + F ++ ++L LV +E+ D + +++V W +++ VGD+S ++ + L ++P++ +LS YF F KLA+ L +F ++F+C+ IS GA+Q+LL+T ++KT LL +PS+ + +Y V+ ++KAE +LKV+ L VD + Y LLP E Q++LE++G+K+ +H +L+ + Sbjct: 446 LRGYATSCLVAFLPSLGSQQSGAANLFSLIREEIAYPRLTPDQQFLVCCILATADWCAETSIQLQEKLSQRIP-----GVDISQETEAFYSITNQSLQVLVQDVESTCDAALQSISKVNWTAVDCVGDESPFIGSMRAHLRQAVPLIRDMLSDRRKYFAHFCLKLATQLAHKFVGSLFRCRTISTHGAEQLLLETHSLKTFLLSVPSIDSIINSKPPTAYVTSVNAALTKAEMILKVVMCSLETVDEFVEQYIKLLPASDAAEMQKVLEMKGVKRQEHSAVLNAY 725
BLAST of DY304455 vs. ExPASy Swiss-Prot
Match: VPS53_PONAB (Vacuolar protein sorting-associated protein 53 homolog OS=Pongo abelii GN=VPS53 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.704e-24 Identity = 65/212 (30.66%), Postives = 118/212 (55.66%), Query Frame = 2 Query: 11 CTALTKSQTLLNLFKVFQRILKAYATKLFA-RLPR-----GGTGIVAAATGMDGQ--IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQM 616 C+ L+ + ++ L +FQ+ L+ YA K+ + LP+ GG I + +G + + + +IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+ D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K A+S P+F ++FKCK IS GA+Q+ Sbjct: 485 CSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISSLLKEKEGSEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQV 696
BLAST of DY304455 vs. ExPASy Swiss-Prot
Match: VPS53_HUMAN (Vacuolar protein sorting-associated protein 53 homolog OS=Homo sapiens GN=VPS53 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.704e-24 Identity = 65/212 (30.66%), Postives = 118/212 (55.66%), Query Frame = 2 Query: 11 CTALTKSQTLLNLFKVFQRILKAYATKLFA-RLPR-----GGTGIVAAATGMDGQ--IRISERDERVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDNEMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLSPI--YFQFFLDKLASSLGPRFYANIFKCKHISETGAQQM 616 C+ L+ + ++ L +FQ+ L+ YA K+ + LP+ GG I + +G + + + +IC I+++AEYC T+ L E + + +D L + ++++ D FS VI+ ++ LV L+ D + M+++ W ++E VGDQS YV + + + ++P++ L+ YF F K A+S P+F ++FKCK IS GA+Q+ Sbjct: 485 CSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISSLLKEKEGSEVAKFTLEELCLICNILSTAEYCLATTQQLEEKLKEKVDVSLIERINLTGEMDTFSTVISSSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRKYFTQFCVKFANSFIPKFITHLFKCKPISMVGAEQV 696
BLAST of DY304455 vs. ExPASy Swiss-Prot
Match: YDLF_SCHPO (Uncharacterized protein C3A12.15 OS=Schizosaccharomyces pombe GN=SPAC3A12.15 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.007e-20 Identity = 87/309 (28.16%), Postives = 149/309 (48.22%), Query Frame = 2 Query: 29 SQTLLNLFKVFQRILKAYATKLFARLPR-----GGTGIVAAATGMDGQIRISERDE----RVICYIVNSAEYCHKTSGDLAESVSKIIDSQLADGVDMSEVQDEFSAVITKALVTLVLGLETKFDN----EMAGMTRVPWGSLESVGDQSEYVNGINMILTSSIPVLGSLLS-PIYFQFFLDKLASSLGPRFYANIFKCKHISETGAQQMLLDTQAVKTILLDIPSLGRQTSNAASYTKFVSREMSKAEALLKVILSPVDSVA---DTYRALLPEGTPMEFQRILELRGLKKADHQTILDDFNKHVPGT 904 SQ L + K+FQ K F RL R G + Q+ + + E + I +N+AEY ++T+ +L + +I + + D + SEV + VI+ + TL+ KF+N ++ ++++ ++E+VGDQS YV G +T+ S++ ++ + F D+ S +F I+ K ISE GA+Q+LLD + K LL +P L + S SY ++ M E +LK +L+P A +Y L+ + + F +LEL+G+ K+D + L F+ V T Sbjct: 400 SQVLSSSIKLFQAYRKTLTQ--FVRLTRSSPLVGLKNLFIKWLRRYTQVELLDYQESSTFKDIAIRLNTAEYIYRTTIELEKRFQEISNKEFKDKMSFSEVLE----VISSSRGTLLKFATGKFENVLNSDLEPLSKMDLKNIETVGDQSSYVGGAVQNMTAKASEFLSVVDLNMFARNFCDRSCESFTRQFLNAIYLAKPISEVGAEQLLLDLYSFKNALLKLPDLKQDYSITDSYINHLTIFMGYIETVLKTLLTPASPKAGFIQSYIFLVKDRSVTNFTVLLELKGVGKSDISSFLQQFSDFVKKT 702 The following BLAST results are available for this feature:
BLAST of DY304455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304455 ID=DY304455; Name=DY304455; organism=Citrus clementina; type=EST; length=1286bpback to top |