DY304456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GATA6_ARATH (GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.121e-25 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 841 RNPQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTFCSVIAPPTPQKGIREMKNK 1017 + PQWREGP GPKTLCNACGVR++ GR PEY PA SPTF + + +K I EM+ K Sbjct: 229 KTPQWREGPSGPKTLCNACGVRFRSGRLVPEYRPASSPTFIPAVHSNSHRK-IIEMRRK 286 HSP 2 Score: 64.3142 bits (155), Expect = 1.121e-25 Identity = 66/232 (28.45%), Postives = 96/232 (41.38%), Query Frame = 2 Query: 230 EFFDDVVD----TLEDLEACNIGVDDWNANFEALEPPPFGWTDFPVVPTSNHISCHRPQVKQ------------KPXXXXXXXXXXXYVCNKSNDGKYLLLSQTSSPISVLESG-GSCSAEKHVPINPKLVFAVKRARSKRRRPATLNPLFIYPFISSTSEDYHPETASESGSEMNL---TEXXXXXXXXXXXNLTVLSGSRENKKLSFQQTDAPRKCMHCEVAETHNGGKG 865 +FFDD+++ L+D++ N G DW F+ LEPPP FP +P S+ SC K K + + + K L Q+ SP+SVLE+ GS S H + +L F VK RSKR+RP TL +++P SE PE ++ E +E +S + E + RKC HCE +T +G Sbjct: 20 DFFDDLINHLDVPLDDIDTTN-GEGDWVDRFQDLEPPPMDM--FPTLP-SDLTSCGSGMAKAPRVDIQRNIPALKQSYSSEALSSTLHQSSAPPEIKVSKLFQSLSPVSVLENSYGSLST--HNNGSQRLAFPVKGMRSKRKRPTTLRLSYLFP-----SEPRKPEKSTPGKPESECYFSSEQHAKKKRKIHLTTRTVSSTLE----ASNSDGIVRKCTHCETTKTPQWREG 236
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GATA5_ARATH (GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.898e-25 Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 1 Query: 847 PQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTFCSVIAPPTPQKGIREMKNK 1017 PQWR+GP GPKTLCNACGVR+K GR PEY PA SPTF + + +K I EM+ K Sbjct: 229 PQWRQGPSGPKTLCNACGVRFKSGRLVPEYRPASSPTFIPSVHSNSHRK-IIEMRKK 284 HSP 2 Score: 65.0846 bits (157), Expect = 1.898e-25 Identity = 64/230 (27.83%), Postives = 98/230 (42.61%), Query Frame = 2 Query: 230 EFFDDVVD----TLEDLEACNIGVDDWNANFEALEPPPFGWTDFPVVPTSNHISCHR------------PQVKQK-PXXXXXXXXXXXYVCNKSNDGKYLLLSQTSSPISVLESG-GSCSAEKHVPINPKLVFAVKRARSKRRRPATLNPLFIYPFISSTSEDYHPETASESGSEMNLTEXXXXXXXXXXXNLTVLSGSRENKKLSFQQTDAPRKCMHCEVAETHNGGKG 865 +FFD + + LED+++ N G DW A F+ LEPPP FP +P S+ SC + P +KQ + + D K L Q+ +P+SVLE+ GS S + + +L F VK RSKRRRP T+ +++PF S T SE + + + +++ + + S + R C HCE T +G Sbjct: 20 DFFDGLTNHLDCPLEDIDSTN-GEGDWVARFQDLEPPPLDM--FPALP-SDLTSCPKGAARVRIPNNMIPALKQSCSSEALSGINSTPHQSSAPPDIKVSYLFQSLTPVSVLENSYGSLSTQNSG--SQRLAFPVKGMRSKRRRPTTVRLSYLFPFEPRKSTPGESVTEGYYSSEQHAKK---------KRKIHLITHTESSTLESSKSDGIVRICTHCETITTPQWRQG 234
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GATA7_ARATH (Putative GATA transcription factor 7 OS=Arabidopsis thaliana GN=At2g28340 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 8.668e-22 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 1 Query: 847 PQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTFCSVI 972 PQWREGP G KTLCNACG+R++ GR EY PA SPTF + Sbjct: 226 PQWREGPNGRKTLCNACGIRFRSGRLVLEYRPAASPTFIPTV 267 HSP 2 Score: 62.3882 bits (150), Expect = 8.668e-22 Identity = 66/261 (25.29%), Postives = 101/261 (38.70%), Query Frame = 2 Query: 194 MNDDNWI----FSHL-DEFFDDVVDTLEDLEACNI--GVD--DWNANFEALEPPPFGWTDFPVVPTSNHISCHRPQVK-QKPXXXXXXXXXXXY---------------------------VCNKSNDGKYLLLSQTSSPISVLESGGSCSAEKHVPINPKLVFAVKRARSKRRRPATLNPLFIYPFISSTSEDYHPETASESGSEMNLTEXXXXXXXXXXXNLTVLSGSRENKKLSFQQTDAPRKCMHCEVAETHNGGKG 865 MN+D W+ F L D F D++VD D+ +I G D DW+A F+ L PPP ++ S +C+ +V+ QK Y V N + K L Q+ SP+SVL++ + ++ + KL F VK RSKR+RP L F+ F+ S+ + P+ + S ++ L ++NK KC HCE T +G Sbjct: 1 MNNDLWLPEEDFKGLPDNFLDNLVDPTNDVSVEDIETGDDEGDWDAKFQKLVPPPLD----ELMSLSYEFTCNGQRVQVQKHVPILLVILSQMYMDLNGFQFGNWDVVIEKQSSSSEVFSTVDNSPPNVKVSKLLQSLSPVSVLKNTNGSGSPQNPNGDQKLAFLVKGIRSKRKRPTLLRVTFLKSFLLEMSQQFAPDESESS-------------------EISALKKRKKNKSRRL-------KCTHCETTTTPQWREG 231
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GAT10_ARATH (GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.536e-16 Identity = 37/59 (62.71%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 841 RNPQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTFCSVIAPPTPQKGIREMKNK 1017 + PQWR GPMGPKTLCNACGVRYK GR PEY PA SPTF + + +K + EM+NK Sbjct: 238 KTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNSHKK-VAEMRNK 295 HSP 2 Score: 29.261 bits (64), Expect = 1.536e-16 Identity = 35/127 (27.56%), Postives = 49/127 (38.58%), Query Frame = 2 Query: 488 QTSSPISVLESGGSCSAEKHVPINPKLVFAVK--RARSKRRRPATLNPLFIYPFISSTSEDYHPETASESGSEMNLTEXXXXXXXXXXXNLTVLSGS----RENKKLSFQQTDAP-RKCMHCEVAET 847 ++SSP+SVLES S S + LV K R R+KR RP + + + + S+ N + + SG N S+ P RKCMHCEV +T Sbjct: 116 RSSSPVSVLESSSSSSQTTNTT---SLVLPGKHGRPRTKRPRPPVQDKDRVKDNVCGGDSRLIIRIPKQFLSDHNKMINKKKKKKAKITSSSSSSGIDLEVNGNNVDSYSSEQYPLRKCMHCEVTKT 239
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GAT14_ARATH (GATA transcription factor 14 OS=Arabidopsis thaliana GN=At5g66320 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.685e-13 Identity = 37/59 (62.71%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 841 RNPQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTFCSVIAPPTPQKGIREMKNK 1017 + PQWR GPMG KTLCNACGVRYK GR PEY PA SPTF S + +K I EM+ K Sbjct: 258 KTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVI-EMRRK 315 HSP 2 Score: 23.483 bits (49), Expect = 6.685e-13 Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 2 Query: 797 QQTDAPRKCMHCEVAET 847 QQ RKC HC V +T Sbjct: 243 QQLQPQRKCSHCGVQKT 259
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GAT13_ARATH (GATA transcription factor 13 OS=Arabidopsis thaliana GN=At5g25830 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.314e-12 Identity = 32/40 (80.00%), Postives = 33/40 (82.50%), Query Frame = 1 Query: 841 RNPQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTF 960 + PQWR GPMGPKTLCNACGVRYK GR PEY PA SPTF Sbjct: 228 KTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 267
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GAT11_ARATH (GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.314e-12 Identity = 32/40 (80.00%), Postives = 33/40 (82.50%), Query Frame = 1 Query: 841 RNPQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTF 960 + PQWR GPMGPKTLCNACGVRYK GR PEY PA SPTF Sbjct: 206 KTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTF 245
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GATA4_ARATH (GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.716e-12 Identity = 36/54 (66.67%), Postives = 38/54 (70.37%), Query Frame = 1 Query: 799 ANRCT*EMHAL*GGRNPQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTF 960 A RCT H + PQWR GP+GPKTLCNACGVRYK GR PEY PA SPTF Sbjct: 157 ARRCT---HCA-SEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTF 206
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GATA1_ARATH (GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 3.823e-12 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 1 Query: 841 RNPQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTFCSVIAPPTPQKGIREMKNK 1017 + PQWR GP GPKTLCNACGVRYK GR PEY PA SPTF + + + +K I EM+ + Sbjct: 203 KTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRK-IVEMRKQ 260
BLAST of DY304456 vs. ExPASy Swiss-Prot
Match: GATA3_ARATH (GATA transcription factor 3 OS=Arabidopsis thaliana GN=GATA3 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 4.993e-12 Identity = 34/57 (59.65%), Postives = 40/57 (70.18%), Query Frame = 1 Query: 847 PQWREGPMGPKTLCNACGVRYKVGRPGPEYPPAGSPTFCSVIAPPTPQKGIREMKNK 1017 PQWR GP+GPKTLCNACGVR+K GR PEY PA SPTF + I +K + K+K Sbjct: 191 PQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRKVLELRKSK 247 The following BLAST results are available for this feature:
BLAST of DY304456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304456 ID=DY304456; Name=DY304456; organism=Citrus clementina; type=EST; length=1281bpback to top |