DY304472
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2) HSP 1 Score: 317.39 bits (812), Expect = 1.141e-85 Identity = 157/296 (53.04%), Postives = 220/296 (74.32%), Query Frame = 2 Query: 77 MALFSRLRTNLNLF-----SQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYS 946 MAL SR+R++ +LF S + + S+ILS KTPLTSK+K++AAL+LLKSE +P++ILEICRAA+LTP+ +DR+AFS A+ L+E +F+ +S L+ ++ RPDL++ERF AH+I+LY QANM +H++R F+++++ ++ +V + NALL A +AKDYKE KRV+IE PK YGI+PDL+TYNR+IK FCE I+A M+RK IKPN+SSFG +++GFY E+K ++V KVL MM+ G+ GVS YN+RI SLCK +K EA+ LLD MLS GMKPN++ YS Sbjct: 1 MALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYS 296
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=1 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 5.146e-70 Identity = 133/292 (45.55%), Postives = 203/292 (69.52%), Query Frame = 2 Query: 77 MALFSRLRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDK-TRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEE-LKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYS 946 MA R+RT+ QK ++ SS S LTSK K +R L+LLKSE+NP++ILEICR+ +L+P+ H+DR+ FS+A+ L+ +F +SQ L+ ++ +PD ++E F +IILYG+ANM + +++TF+ ++++++ +V + NALL A +AKDYKE RV++E PK YGI+PDL+TYNR+I+ CE I+A M+RK IKP A+SFG ++ GFYKEEK+++V KV++MM+ +G+ GV+ YN+ I LCK +K AEA+ L+D ++S M+PNS+ YS Sbjct: 1 MAFLFRIRTS-EFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYS 291
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.515e-29 Identity = 84/305 (27.54%), Postives = 146/305 (47.87%), Query Frame = 2 Query: 134 RYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYSPFHLRVPGKKGNLKEA*KVLKGIRK*QGGWSPKK 1048 R+ + ++++S ++ +L+ E NP++I+E + A + + + + +L A + + + LEE K D+ E F A I LYG+A M E+A + F+EM + SV +FNALL A ++K + V+ +F E P IKPD+ +YN +IKA CE +L ++ K +KP+ +F L+ Y + ++E ++ M + + YN R+ L K E L E+ + G+KP+ ++ +R +G + EA K I K G+ P K Sbjct: 19 RFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM-IRGSINEGKMDEAEAWYKEIVK--HGYRPDK 320
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PP225_ARATH (Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.515e-29 Identity = 78/268 (29.10%), Postives = 132/268 (49.25%), Query Frame = 2 Query: 143 ATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYS 946 A+++ + G ++ +KD + LT EK C + + L +S I +L EA F+ I + L+ K D+++E F ++LYG + M EHA + F EM E +V +FNALL A +K E + F E P+ GI PDL TYN +IKA C I +++ +P+ SF L+ FY+ E + + +++ +M+ + + YN R+ L + +K +A L+D M ++G+ P+ Y+ Sbjct: 44 ASTASVGDGGQSSNDAKDSKNSKLT-----QKVEKFKRSCESESFRQVHGL----YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYN 302
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 3.374e-29 Identity = 88/292 (30.14%), Postives = 155/292 (53.08%), Query Frame = 2 Query: 149 SSILSSGDKT-PLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLD-RLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYG-IKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYSPFHLRVPGKKGNLKEA*KVLKGI 1015 +S + G T P + K A + L+ E +P+K L+I + S + R A + + +L++ F+ I +E K P ++ E F++ I YGQA+M HA+RTF++MD++ S +FNALL A +K++ +V ++F E P+ Y I PD +Y +IK++C+ I+ M K ++ +F +++ YK+ + E + + M + G + + YNVRI S K + L++EM S G+KP++I Y+ + + ++G L EA KV +G+ Sbjct: 15 ASAAADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYN-YLMTAYCERGMLDEAKKVYEGL 304
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PP134_ARATH (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana GN=At1g80150 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.187e-28 Identity = 79/246 (32.11%), Postives = 124/246 (50.41%), Query Frame = 2 Query: 209 ALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYS 946 AL LKSE +PEK+ + +A A +R AF +++L+ A + I LE KT P + E F I+LYG+A MT+ A+ TF MD + + SV +FNA L L+ D + + P YGI D ++N IK+FCE + M++ + P+ ++ L++ YK E+ N + +M G K ++ +NVRI L R+ +A LL M ++P+SI Y+ Sbjct: 41 ALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYN 286
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.567e-26 Identity = 86/322 (26.71%), Postives = 147/322 (45.65%), Query Frame = 2 Query: 95 LRTNLNLFSQKHHRYLATSSILSSGDKTPLTSKDKTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYSPFHLRVPGKKGNLKEA*KVLKGIRK*QGGWSPKKLPVN 1060 LR N + + + R+ S +++ TP K + +TL+ E +P+ I E + A + + + +L+ A F + + LEE P++ E F A I LYG+ M E+A + F EM E + + +FNALL A +K + V+ +F E P I+PD+ +YN +IK C ++ ++ K +KP+ +F L+ Y + K+E+ ++ M +K + YN R+ L K E L D++ +KP+ ++ ++ +G L EA K I K G P K N Sbjct: 9 LRGNFSFSTHTNRRFF---SAVTAAAATPSPPKP---SLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM-IKGFVSEGKLDEAITWYKEIEK--NGCRPLKFVFN 321
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PP162_ARATH (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana GN=At2g18520 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.047e-26 Identity = 77/273 (28.21%), Postives = 143/273 (52.38%), Query Frame = 2 Query: 209 ALTLLKSESNPEKILEICRAAALTPESHLD-RLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTY-GIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYSPFHLRVPGKKGNLKEA*KVLKGIRK 1021 A + L+ +P+K L I ++ + S L R A + + +L+++ F+ I +E K P ++ E F + I YG+A+M +HA++ F+EMD+ +V +FNALL A + ++ V ++F EFP+ Y I PD +Y +IK++C+ I+ M+ K ++ +F ++ YK ++ + M G ++YNVR+ + K + L++EM S G+KP+++ Y+ + + KG + EA KV +G+ + Sbjct: 36 AKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSYN-YLMTAYCVKGMMSEAKKVYEGLEQ 306
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PP230_ARATH (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.680e-18 Identity = 74/297 (24.92%), Postives = 131/297 (44.11%), Query Frame = 2 Query: 113 LFSQKHHRYLATSSILSSGDKTP-LTSKD--KTRAALTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQ-NERFHAHSIILYGQ-ANMTEHAVRTFKEMDEHKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEMLSKGMKPNSIPYSPFHLRVPGKKGNLK 988 L S RY ++S S D+ L KD L + + +P +L + + + +++ INK +A ++ I + + +K + +E F + + +YG A A+ M + S +FN +L L AK + E+ ++F+ PK G++ D N +IK CE +L ++ +PN +F L+ GF + K+E+ K+L+ ME+ ++ +N+ I L K + E LL+ M KG +PN Y + KK NL+ Sbjct: 30 LSSSSSDRYTSSSQRYSGDDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL-GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
BLAST of DY304472 vs. ExPASy Swiss-Prot
Match: PP221_ARATH (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 7.797e-18 Identity = 64/234 (27.35%), Postives = 109/234 (46.58%), Query Frame = 2 Query: 212 LTLLKSESNPEKILEICRAAALTPESHLDRLAFSIAINKLSEANYFNGISQYLEELKTRPDLQNERFHAHSIILYGQANMTEHAVRTFKEMDE-HKLRHSVGAFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAXMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAQGLLDEML 910 L LLKSE NP + +A P + + + +LSE N +S+ +E ++++ +E I YG+ +M + A+ FK M E ++ ++N LL A AK + +V+ +F F +T G+ P+L TYN +IK C+ L M ++ KP+ S+ ++ K K +D ++ M G+ V+ YN+ I K + A L D +L Sbjct: 14 LKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246 The following BLAST results are available for this feature:
BLAST of DY304472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304472 ID=DY304472; Name=DY304472; organism=Citrus clementina; type=EST; length=1266bpback to top |